RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Rpp25Q91WE3 199 aa12.67□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Rps21Q9CQR2 83 aaKnown RBP12.67□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Cnn3Q9DAW9 330 aaKnown RBP12.67□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 PyyQ9EPS2 98 aa12.67□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Gm12728V9GX31 77 aa12.67□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Nup205A0A0J9YUD5 2061 aaKnown RBP12.67□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Olfr1024A2ASU7 327 aa12.67□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 EnamO55196 1274 aa12.67□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 P06323 132 aa12.67□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Tnfrsf9P20334 256 aa12.67□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 RprmlQ3URD2 117 aa12.67□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Fxyd3Q61835 88 aa12.67□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Rab29Q91YQ1 204 aa12.67□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Ucn3Q924A4 164 aa12.67□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Col11a2Q64739 1736 aa12.67□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Olfr874Q7TRE6 310 aa12.66□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 AicdaQ9WVE0 198 aa12.66□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Vmn1r167G3UW71 315 aa12.66□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Khdc1bP0C7A0 126 aa12.66□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Prickle3Q80VL3 624 aa12.66□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Olfr1453Q8VFX0 307 aa12.66□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Ms4a3Q920C4 213 aa12.66□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Gm12886B1AZM5 119 aa12.66□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Sh2d1bO35324 132 aa12.66□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Lcn2P11672 200 aa12.66□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Wfdc5Q4KXB6 126 aa12.66□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Cela3bQ9CQ52 269 aa12.66□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Fam89bQ9QUI1 189 aa12.66□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 NrapQ80XB4 1728 aa12.66□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Ltbp1Q8CG19 1712 aa12.66□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 BC025446A0A087WQT1 134 aa12.66□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 3110040M04RikA0A286YDK0 300 aa12.66□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 A0A286YE43 300 aa12.66□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 MrgprgQ91ZB5 289 aa12.66□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Abhd17aQ99JW1 310 aa12.66□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Cldn10Q9Z0S6 231 aa12.66□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Gm16442D3YZG3 307 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Gm42957D6RFQ2 366 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Sc5dO88822 299 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 P01796 113 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 P01797 113 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 P01799 113 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 PpicP30412 212 aaKnown RBP12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Olfr76Q8VFV2 317 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 TirapQ99JY1 241 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 AgmatA2AS89 358 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 ClcP97400 68 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Olfr1178Q7TR20 323 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Gm10190Q8BSD7 107 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 SprnQ8BWU1 147 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Cacna1dQ99246 2179 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Vgll1Q99NC0 307 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 ApooQ9DCZ4 198 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 PdfS4R2K0 231 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Ighv1-43A0A0A6YXN5 117 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Cypt3B1AY64 174 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Gm21874J3QNZ6 232 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Arf6P62331 175 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Stxbp6Q8R3T5 210 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Olfr976Q8VF15 326 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Tmem186Q9CR76 216 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Lamtor2Q9JHS3 125 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Gm38303A0A0A6YWW8 100 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Tgfbr3lD3YZZ2 297 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Psg27Q497W2 474 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Onecut2Q6XBJ3 505 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Bles03Q8VD62 251 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Unc119Q9Z2R6 240 aa12.65□□□□□ -0.38
Pcdha1-201ENSMUST00000070797 Gm45753A0A1C7CYU8 86 aa12.65□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Defa3P28310 93 aa12.65□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Defa10P50708 93 aa12.65□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Defa15P50713 93 aa12.65□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Gpr135Q7TQP2 457 aa12.65□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Olfr223Q8VF69 319 aa12.65□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Olfr494Q8VG07 314 aa12.65□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Olfr1264Q9R0K2 308 aa12.65□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Trbv1A0A0B4J1G7 116 aa12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 MscO88940 201 aa12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 P01648 108 aa12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Fgf5P15656 264 aa12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Pef1Q8BFY6 275 aa12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Rpl23P62830 140 aaKnown RBP12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Q5BN45 167 aa12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Rpl11Q9CXW4 178 aaKnown RBP12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Esp4A8R0T8 117 aa12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 B4galt1P15535 399 aa12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Evx1P23683 416 aa12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Tnfrsf26P83626 204 aa12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Smad4P97471 551 aa12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Olfr1202Q8VF98 309 aa12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Ap5s1Q9D742 170 aa12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Fer1l6E0CZ42 1862 aa12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Ighv1-67A0A0G2JFN9 117 aa12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Adra2aQ01338 450 aa12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 MyocosQ3UWS6 143 aa12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 AamdcQ8R0P4 122 aa12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Olfr481Q8VGI5 312 aa12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Tmprss5Q9ER04 455 aa12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Opn4Q9QXZ9 521 aa12.64□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Olfr898L7N1Z5 316 aa12.63□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 42.6 ms