RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Cd46O88174 365 aa15.68■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 TymsP07607 307 aa15.68■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Asphd1Q2TA57 360 aa15.68■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Pom121l2Q5SW25 972 aa15.68■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Tmem56Q8CGF5 276 aa15.68■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Olfr137Q8VFC2 312 aa15.68■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Olfr1155Q8VFR3 314 aa15.68■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Olfr1448Q8VFX1 314 aa15.68■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Rnaseh2cQ9CQ18 166 aa15.68■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Syt13Q9EQT6 426 aa15.68■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 PkdrejQ9Z0T6 2126 aa15.68■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Dmxl1Q6PNC0 3013 aa15.68■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Fut9O88819 359 aa15.68■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Rpl29P47915 160 aaKnown RBP15.68■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Rpl23P62830 140 aaKnown RBP15.68■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Gpr4Q8BUD0 365 aa15.68■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Fcgr4A0A0B4J1G0 249 aa15.67■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Trav12d-1A0N8R0 115 aa15.67■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Rps16P14131 146 aaKnown RBP15.67■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Ms4a6cQ99N08 217 aa15.67■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Uqcc1Q9CWU6 295 aa15.67■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Tex43Q9D9I1 141 aa15.67■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 P2ry6Q9ERK9 328 aa15.67■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Samt3A2ARK7 233 aa15.67■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 H2-M5A7VMS3 348 aa15.67■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Klrd1O54707 179 aa15.67■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 TcapO70548 167 aa15.67■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Pax8Q00288 457 aa15.67■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Olfr91Q7TRL3 312 aa15.67■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Psg22Q810J1 475 aa15.67■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Wipi1Q8R3E3 446 aa15.67■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Rab29Q91YQ1 204 aa15.67■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Shisal2bQ9D1Y9 158 aa15.67■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Nek7Q9ES74 302 aa15.67■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Egr4Q9WUF2 478 aa15.67■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Adamts17E9Q4D1 1122 aa15.66■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Gm12830F6XVH0 157 aa15.66■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Olfr358Q7TRY5 330 aa15.66■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Tmem126bQ9D1R1 230 aa15.66■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Gm28372A0A087WNV0 220 aa15.65■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Muc3E9PWP7 378 aa15.65■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Meox1P32442 253 aa15.65■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Zic3Q62521 466 aa15.65■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Olfr874Q7TRE6 310 aa15.65■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Olfr473Q8VG44 310 aa15.65■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Coa3Q9D2R6 108 aa15.65■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Fscn3Q9QXW4 498 aa15.65■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Pfdn5Q9WU28 154 aa15.65■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Olfr196E9PYP4 309 aa15.65■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Bricd5Q8BV89 174 aa15.65■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Tmem239Q9DA47 151 aa15.65■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 Cst10Q9JM84 148 aa15.65■□□□□ 0.1
Shkbp1-201ENSMUST00000003857 BC053393A0A0B4J1F6 192 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 A930017K11RikE0CXQ2 571 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 H3f3cP02301 136 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Hoxb2P0C1T1 354 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 ParlQ5XJY4 377 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Tbpl2Q6SJ95 350 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Clec4a1Q80UI7 245 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Wdr82Q8BFQ4 313 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Olfr1440Q8VFV4 315 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Fbxo25Q9D2Y6 357 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Vmn1r171Q9EPS6 316 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Usf3B2RUQ2 2221 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 G530012D18RikJ3QK25 139 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 3110021N24RikJ3QMN2 152 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 P01804 111 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Hist1h2bfP10853 126 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Timp1P12032 205 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Olfr141Q60880 325 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Hist1h2bbQ64475 126 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Cxxc4Q6NXI8 198 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Tmem106bQ80X71 275 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 AmtQ8CFA2 403 aaKnown RBP15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Hist1h2bkQ8CGP1 126 aaKnown RBP15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Hist1h2bpQ8CGP2 126 aaKnown RBP15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Pitpnc1Q8K4R4 332 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Olfr1269Q8VEZ2 309 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Olfr786Q8VFH8 312 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Olfr1294Q8VGE5 312 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Prune2Q52KR3 3084 aa15.64■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Trav6n-7A0A075B6A6 116 aa15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Olfr282A1L1B4 308 aa15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Slc25a31Q3V132 320 aa15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Gm614Q3V2K1 191 aa15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Olfr1386Q7TQT0 309 aa15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Acaa1bQ8VCH0 424 aa15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Acaa1aQ921H8 424 aaKnown RBP15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Slc25a2Q99ML6 265 aa15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Ighv1-36A0A0A6YXT2 117 aa15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Gm20773A0A0A6YXW2 232 aa15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Gm20807A0A0A6YXX7 232 aa15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Igkv4-51A0N8I8 119 aa15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Zfp334A2A4U6 679 aa15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Olfr221B2RVX8 311 aa15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Gm20873J3QMQ9 232 aa15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Gm20795J3QP49 232 aa15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Gm21310J3QQ23 232 aa15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Q0VG49 157 aa15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Gm21440Q3TTD8 232 aa15.63■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 86.1 ms