RNA–Protein interactions for RNA: YPL011C

TAF3, Transcript of TFIID subunit (47 kDa), yeast

Gene TAF3, Length 1,062 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TAF3	YPL011C	PEX15	Q08215	383 aa		4.9	□□□□□ -1.63
TAF3	YPL011C	MDM20	Q12387	796 aa	Known RBP	4.9	□□□□□ -1.63
TAF3	YPL011C	VPS5	Q92331	675 aa		4.9	□□□□□ -1.63
TAF3	YPL011C	LEU2	P04173	364 aa	Predicted RBP	4.89	□□□□□ -1.63
TAF3	YPL011C	VPS33	P20795	691 aa		4.89	□□□□□ -1.63
TAF3	YPL011C	SAT4	P25333	603 aa	Known RBP	4.89	□□□□□ -1.63
TAF3	YPL011C	DHR2	P36009	735 aa	Predicted RBP	4.89	□□□□□ -1.63
TAF3	YPL011C	THI6	P41835	540 aa		4.89	□□□□□ -1.63
TAF3	YPL011C	CPR8	P53728	308 aa		4.89	□□□□□ -1.63
TAF3	YPL011C	SQS1	P53866	767 aa	Known RBP	4.89	□□□□□ -1.63
TAF3	YPL011C	MFM1	Q02783	413 aa		4.89	□□□□□ -1.63
TAF3	YPL011C	TRS23	Q03784	219 aa		4.89	□□□□□ -1.63
TAF3	YPL011C	ARG7	Q04728	441 aa		4.89	□□□□□ -1.63
TAF3	YPL011C	DIN7	Q12086	430 aa		4.89	□□□□□ -1.63
TAF3	YPL011C	SLX4	Q12098	748 aa		4.89	□□□□□ -1.63
TAF3	YPL011C	RTK1	Q12100	620 aa	Predicted RBP	4.89	□□□□□ -1.63
TAF3	YPL011C	CAP1	P28495	268 aa	Known RBP	4.88	□□□□□ -1.63
TAF3	YPL011C	YMC1	P32331	307 aa		4.88	□□□□□ -1.63
TAF3	YPL011C	UGP1	P32861	499 aa	Known RBP	4.88	□□□□□ -1.63
TAF3	YPL011C	YJL193W	P39542	402 aa		4.88	□□□□□ -1.63
TAF3	YPL011C	MAD2	P40958	196 aa		4.88	□□□□□ -1.63
TAF3	YPL011C	IMO32	P53219	342 aa		4.88	□□□□□ -1.63
TAF3	YPL011C	USA1	Q03714	838 aa		4.88	□□□□□ -1.63
TAF3	YPL011C	PHM6	Q05637	104 aa		4.88	□□□□□ -1.63
TAF3	YPL011C	KAR1	P11927	433 aa		4.87	□□□□□ -1.63
TAF3	YPL011C	PEX2	P32800	271 aa		4.87	□□□□□ -1.63
TAF3	YPL011C	STL1	P39932	569 aa		4.87	□□□□□ -1.63
TAF3	YPL011C	HOL1	P53389	586 aa		4.87	□□□□□ -1.63
TAF3	YPL011C	BUD17	P53727	317 aa		4.87	□□□□□ -1.63
TAF3	YPL011C	YNL018C	P53976	612 aa		4.87	□□□□□ -1.63
TAF3	YPL011C	RPA135	P22138	1203 aa	Known RBP	4.86	□□□□□ -1.63
TAF3	YPL011C	YPT10	P38146	199 aa		4.86	□□□□□ -1.63
TAF3	YPL011C	PIH1	P38768	344 aa		4.86	□□□□□ -1.63
TAF3	YPL011C	TGL2	P54857	326 aa		4.86	□□□□□ -1.63
TAF3	YPL011C	LGE1	Q02796	332 aa	Known RBP	4.86	□□□□□ -1.63
TAF3	YPL011C	COQ11	Q05892	277 aa		4.86	□□□□□ -1.63
TAF3	YPL011C	ULA1	Q12059	462 aa		4.86	□□□□□ -1.63
TAF3	YPL011C	URA3	P03962	267 aa		4.85	□□□□□ -1.63
TAF3	YPL011C	ADE5,7	P07244	802 aa	Known RBP	4.85	□□□□□ -1.63
TAF3	YPL011C	ARG1	P22768	420 aa		4.85	□□□□□ -1.63
TAF3	YPL011C	SSP120	P39931	234 aa	Known RBP	4.85	□□□□□ -1.63
TAF3	YPL011C	YIL092W	P40497	633 aa		4.85	□□□□□ -1.63
TAF3	YPL011C	PUS4	P48567	403 aa	Known RBP	4.85	□□□□□ -1.63
TAF3	YPL011C	YNR071C	P53757	342 aa		4.85	□□□□□ -1.63
TAF3	YPL011C	YML122C	Q03207	126 aa		4.85	□□□□□ -1.63
TAF3	YPL011C	YPL216W	Q08964	1102 aa		4.85	□□□□□ -1.63
TAF3	YPL011C	ZPS1	Q12512	249 aa		4.85	□□□□□ -1.63
TAF3	YPL011C	CPA2	P03965	1118 aa	Known RBP	4.84	□□□□□ -1.63
TAF3	YPL011C	PMA2	P19657	947 aa		4.84	□□□□□ -1.63
TAF3	YPL011C	VPS34	P22543	875 aa		4.84	□□□□□ -1.63
TAF3	YPL011C	DSS4	P32601	143 aa		4.84	□□□□□ -1.63
TAF3	YPL011C	CCL1	P37366	393 aa		4.84	□□□□□ -1.63
TAF3	YPL011C	COQ6	P53318	479 aa		4.84	□□□□□ -1.63
TAF3	YPL011C	YDL073W	Q07454	984 aa		4.84	□□□□□ -1.63
TAF3	YPL011C	OSW1	Q08692	278 aa		4.84	□□□□□ -1.63
TAF3	YPL011C	PCK1	P10963	549 aa		4.83	□□□□□ -1.64
TAF3	YPL011C	AAD3	P25612	363 aa		4.83	□□□□□ -1.64
TAF3	YPL011C	PET309	P32522	965 aa	Predicted RBP	4.83	□□□□□ -1.64
TAF3	YPL011C	SAP4	P53036	818 aa		4.83	□□□□□ -1.64
TAF3	YPL011C	PEX8	P53248	589 aa		4.83	□□□□□ -1.64
TAF3	YPL011C	YNL034W	P53963	612 aa		4.83	□□□□□ -1.64
TAF3	YPL011C	SLK19	Q08581	821 aa	Known RBP	4.83	□□□□□ -1.64
TAF3	YPL011C	YNL162W-A	Q3E7A8	72 aa		4.83	□□□□□ -1.64
TAF3	YPL011C	WHI2	P12611	486 aa		4.82	□□□□□ -1.64
TAF3	YPL011C	RIM4	P38741	713 aa		4.82	□□□□□ -1.64
TAF3	YPL011C	MDR1	P53258	950 aa		4.82	□□□□□ -1.64
TAF3	YPL011C	CNM67	P53865	581 aa	Known RBP	4.82	□□□□□ -1.64
TAF3	YPL011C	MRI1	Q06489	411 aa	Known RBP	4.82	□□□□□ -1.64
TAF3	YPL011C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	RIP-Chip
TAF3	YPL011C	RPL7A	P05737	244 aa	Known RBP	4.81	□□□□□ -1.64
TAF3	YPL011C	SEC12	P11655	471 aa		4.81	□□□□□ -1.64
TAF3	YPL011C	PRP45	P28004	379 aa	Predicted RBP	4.81	□□□□□ -1.64
TAF3	YPL011C	FMP30	Q02883	468 aa		4.81	□□□□□ -1.64
TAF3	YPL011C	THI7	Q05998	598 aa		4.81	□□□□□ -1.64
TAF3	YPL011C	TGS1	Q12052	315 aa		4.81	□□□□□ -1.64
TAF3	YPL011C	PSF3	Q12146	194 aa		4.81	□□□□□ -1.64
TAF3	YPL011C	RPL7B	Q12213	244 aa	Known RBP	4.81	□□□□□ -1.64
TAF3	YPL011C	HOS1	Q12214	470 aa		4.81	□□□□□ -1.64
TAF3	YPL011C	DBP10	Q12389	995 aa	Known RBP	4.81	□□□□□ -1.64
TAF3	YPL011C	TGL1	P34163	548 aa		4.8	□□□□□ -1.64
TAF3	YPL011C	LOT5	P34234	306 aa		4.8	□□□□□ -1.64
TAF3	YPL011C	TOM20	P35180	183 aa		4.8	□□□□□ -1.64
TAF3	YPL011C	SCS2	P40075	244 aa	Known RBP	4.8	□□□□□ -1.64
TAF3	YPL011C	GSM1	P42950	618 aa		4.8	□□□□□ -1.64
TAF3	YPL011C	COS12	P53053	380 aa		4.8	□□□□□ -1.64
TAF3	YPL011C	TRI1	Q05024	226 aa		4.8	□□□□□ -1.64
TAF3	YPL011C	HOM2	P13663	365 aa	Known RBP	4.79	□□□□□ -1.64
TAF3	YPL011C	RNR3	P21672	869 aa	Known RBP	4.79	□□□□□ -1.64
TAF3	YPL011C	PHO3	P24031	467 aa		4.79	□□□□□ -1.64
TAF3	YPL011C	CDC5	P32562	705 aa		4.79	□□□□□ -1.64
TAF3	YPL011C	PIP2	P52960	996 aa		4.79	□□□□□ -1.64
TAF3	YPL011C	YNL092W	P53934	400 aa		4.79	□□□□□ -1.64
TAF3	YPL011C	CEG1	Q01159	459 aa	Predicted RBP	4.79	□□□□□ -1.64
TAF3	YPL011C	SND1	Q04007	877 aa		4.79	□□□□□ -1.64
TAF3	YPL011C	HOF1	Q05080	669 aa		4.79	□□□□□ -1.64
TAF3	YPL011C	AAC1	P04710	309 aa		4.78	□□□□□ -1.64
TAF3	YPL011C	ADH4	P10127	382 aa		4.78	□□□□□ -1.64
TAF3	YPL011C	YFL015C	P43578	164 aa		4.78	□□□□□ -1.64
TAF3	YPL011C	TAX4	P47030	604 aa		4.78	□□□□□ -1.64
TAF3	YPL011C	PCL8	Q08966	492 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms