RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W TGS1Q12052 315 aa3.21□□□□□ -1.9
SEC22YLR268W DHR2P36009 735 aaPredicted RBP3.2□□□□□ -1.9
SEC22YLR268W YIL024CP40543 189 aa3.2□□□□□ -1.9
SEC22YLR268W SAP4P53036 818 aa3.2□□□□□ -1.9
SEC22YLR268W NDD1Q08887 554 aa3.2□□□□□ -1.9
SEC22YLR268W YMR085WP0CF18 432 aa3.19□□□□□ -1.9
SEC22YLR268W SFL1P20134 766 aa3.19□□□□□ -1.9
SEC22YLR268W RNR3P21672 869 aaKnown RBP3.19□□□□□ -1.9
SEC22YLR268W PRE4P30657 266 aa3.19□□□□□ -1.9
SEC22YLR268W ATO2P32907 282 aa3.19□□□□□ -1.9
SEC22YLR268W BRN1P38170 754 aa3.19□□□□□ -1.9
SEC22YLR268W SAE2P46946 345 aa3.19□□□□□ -1.9
SEC22YLR268W YPS7Q06325 596 aa3.19□□□□□ -1.9
SEC22YLR268W TPO3Q06451 622 aa3.19□□□□□ -1.9
SEC22YLR268W YPT1P01123 206 aaKnown RBP3.18□□□□□ -1.9
SEC22YLR268W YCP4P25349 247 aaKnown RBP3.18□□□□□ -1.9
SEC22YLR268W CAP1P28495 268 aaKnown RBP3.18□□□□□ -1.9
SEC22YLR268W CRG1P38892 291 aaRIP-Chip data3.18□□□□□ -1.9not detected
SEC22YLR268W COP1P53622 1201 aaKnown RBP3.18□□□□□ -1.9
SEC22YLR268W YTH1Q06102 208 aaPredicted RBP3.18□□□□□ -1.9
SEC22YLR268W YEL076C-AP0CX16 216 aa3.17□□□□□ -1.9
SEC22YLR268W YLR464WP0CX17 216 aa3.17□□□□□ -1.9
SEC22YLR268W CCL1P37366 393 aa3.17□□□□□ -1.9
SEC22YLR268W OCA5P38738 679 aa3.17□□□□□ -1.9
SEC22YLR268W YEL076CP39971 216 aa3.17□□□□□ -1.9
SEC22YLR268W FTR1P40088 404 aa3.17□□□□□ -1.9
SEC22YLR268W BUD6P41697 788 aa3.17□□□□□ -1.9
SEC22YLR268W TIM50Q02776 476 aa3.17□□□□□ -1.9
SEC22YLR268W USA1Q03714 838 aa3.17□□□□□ -1.9
SEC22YLR268W SCW10Q04951 389 aa3.17□□□□□ -1.9
SEC22YLR268W STP4Q07351 490 aa3.17□□□□□ -1.9
SEC22YLR268W GUD1Q07729 489 aa3.17□□□□□ -1.9
SEC22YLR268W YTA7P40340 1379 aa3.16□□□□□ -1.9
SEC22YLR268W YPT10P38146 199 aa3.16□□□□□ -1.9
SEC22YLR268W YIL092WP40497 633 aa3.16□□□□□ -1.9
SEC22YLR268W IRC7P43623 340 aa3.16□□□□□ -1.9
SEC22YLR268W RPL15BP54780 204 aaPredicted RBP3.16□□□□□ -1.9
SEC22YLR268W WAR1Q03631 944 aa3.16□□□□□ -1.9
SEC22YLR268W NSE5Q03718 556 aa3.16□□□□□ -1.9
SEC22YLR268W SWI6P09959 803 aa3.15□□□□□ -1.91
SEC22YLR268W AIM17P23180 465 aaKnown RBP3.15□□□□□ -1.91
SEC22YLR268W YJU2P28320 278 aaPredicted RBP3.15□□□□□ -1.91
SEC22YLR268W CDS1P38221 457 aa3.15□□□□□ -1.91
SEC22YLR268W FLO5P38894 1075 aa3.15□□□□□ -1.91
SEC22YLR268W YEL025CP39991 1188 aa3.15□□□□□ -1.91
SEC22YLR268W LYS20P48570 428 aaKnown RBP3.15□□□□□ -1.91
SEC22YLR268W TAF4P50105 388 aa3.15□□□□□ -1.91
SEC22YLR268W SNA4Q07549 140 aa3.15□□□□□ -1.91
SEC22YLR268W AIM44Q99299 758 aa3.15□□□□□ -1.91
SEC22YLR268W SFP1P32432 683 aa3.14□□□□□ -1.91
SEC22YLR268W YPL071CQ02864 156 aa3.14□□□□□ -1.91
SEC22YLR268W HRD3Q05787 833 aa3.14□□□□□ -1.91
SEC22YLR268W PCL8Q08966 492 aa3.14□□□□□ -1.91
SEC22YLR268W RPS17AP02407 136 aaKnown RBP3.13□□□□□ -1.91
SEC22YLR268W PHO2P07269 559 aa3.13□□□□□ -1.91
SEC22YLR268W RPS17BP14127 136 aaKnown RBP3.13□□□□□ -1.91
SEC22YLR268W TDA3P38758 523 aa3.13□□□□□ -1.91
SEC22YLR268W DUN1P39009 513 aa3.13□□□□□ -1.91
SEC22YLR268W MDV1P47025 714 aa3.13□□□□□ -1.91
SEC22YLR268W AAT1Q01802 451 aa3.13□□□□□ -1.91
SEC22YLR268W FPR4Q06205 392 aaPredicted RBP3.13□□□□□ -1.91
SEC22YLR268W ARR3Q06598 404 aa3.13□□□□□ -1.91
SEC22YLR268W GRS2Q06817 618 aa3.13□□□□□ -1.91
SEC22YLR268W NTG2Q08214 380 aa3.13□□□□□ -1.91
SEC22YLR268W BI2P03873 423 aa3.12□□□□□ -1.91
SEC22YLR268W ACO1P19414 778 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
SEC22YLR268W COQ3P27680 312 aa3.12□□□□□ -1.91
SEC22YLR268W LRO1P40345 661 aa3.12□□□□□ -1.91
SEC22YLR268W PRM2P40534 656 aa3.12□□□□□ -1.91
SEC22YLR268W CET1O13297 549 aaPredicted RBP3.11□□□□□ -1.91
SEC22YLR268W AAC1P04710 309 aa3.11□□□□□ -1.91
SEC22YLR268W YIL152WP40455 235 aa3.11□□□□□ -1.91
SEC22YLR268W IES1P43579 692 aa3.11□□□□□ -1.91
SEC22YLR268W RET2P43621 546 aa3.11□□□□□ -1.91
SEC22YLR268W MET13P53128 600 aa3.11□□□□□ -1.91
SEC22YLR268W SDA1P53313 767 aaKnown RBP3.11□□□□□ -1.91
SEC22YLR268W NOP15P53927 220 aaPredicted RBP3.11□□□□□ -1.91
SEC22YLR268W BOP3P53958 396 aa3.11□□□□□ -1.91
SEC22YLR268W TFB2Q02939 513 aa3.11□□□□□ -1.91
SEC22YLR268W YLR001CQ07895 862 aa3.11□□□□□ -1.91
SEC22YLR268W AIM41Q12032 185 aa3.11□□□□□ -1.91
SEC22YLR268W MTG2P38860 518 aa3.1□□□□□ -1.91
SEC22YLR268W YNL193WP53870 558 aa3.1□□□□□ -1.91
SEC22YLR268W CYK3Q07533 885 aa3.1□□□□□ -1.91
SEC22YLR268W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
SEC22YLR268W UBX3Q12229 455 aa3.1□□□□□ -1.91
SEC22YLR268W RTT107P38850 1070 aa3.09□□□□□ -1.91
SEC22YLR268W YIR016WP40572 265 aa3.09□□□□□ -1.91
SEC22YLR268W YCG1Q06680 1035 aa3.09□□□□□ -1.91
SEC22YLR268W AHA1Q12449 350 aaKnown RBP3.09□□□□□ -1.91
SEC22YLR268W MTC7P32633 139 aa3.08□□□□□ -1.92
SEC22YLR268W TOM71P38825 639 aaKnown RBP3.08□□□□□ -1.92
SEC22YLR268W YNL058CP53947 316 aa3.08□□□□□ -1.92
SEC22YLR268W VTC3Q02725 835 aa3.08□□□□□ -1.92
SEC22YLR268W DSE3Q08729 430 aa3.08□□□□□ -1.92
SEC22YLR268W ATX2Q12067 313 aa3.08□□□□□ -1.92
SEC22YLR268W TUF1P02992 437 aaKnown RBP3.07□□□□□ -1.92
SEC22YLR268W EHT1P38295 451 aa3.07□□□□□ -1.92
SEC22YLR268W GND1P38720 489 aaKnown RBP3.07□□□□□ -1.92
SEC22YLR268W CKB2P38930 258 aa3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms