RNA–Protein interactions for RNA: YJR139C

HOM6, Transcript of Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase), yeast

Gene HOM6, Length 1,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOM6	YJR139C	PRM9	P39551	298 aa		13.33	□□□□□ -0.28
HOM6	YJR139C	DOT6	P40059	670 aa	Known RBP	13.33	□□□□□ -0.28
HOM6	YJR139C	APT1	P49435	187 aa	Known RBP	13.33	□□□□□ -0.28
HOM6	YJR139C	SND1	Q04007	877 aa		13.33	□□□□□ -0.28
HOM6	YJR139C	RTN1	Q04947	295 aa	Known RBP	13.33	□□□□□ -0.28
HOM6	YJR139C	YLR462W	O13556	202 aa		13.32	□□□□□ -0.28
HOM6	YJR139C	FUS1	P11710	512 aa		13.32	□□□□□ -0.28
HOM6	YJR139C	MRM1	P25270	412 aa		13.32	□□□□□ -0.28
HOM6	YJR139C	SEC6	P32844	805 aa		13.32	□□□□□ -0.28
HOM6	YJR139C	YBL055C	P34220	418 aa	Predicted RBP	13.32	□□□□□ -0.28
HOM6	YJR139C	RCK2	P38623	610 aa		13.32	□□□□□ -0.28
HOM6	YJR139C	YHL049C	P38722	271 aa		13.32	□□□□□ -0.28
HOM6	YJR139C	NEM1	P38757	446 aa		13.32	□□□□□ -0.28
HOM6	YJR139C	FSH1	P38777	243 aa	Known RBP	13.32	□□□□□ -0.28
HOM6	YJR139C	LAM1	P38851	1228 aa		13.32	□□□□□ -0.28
HOM6	YJR139C	UBP7	P40453	1071 aa		13.32	□□□□□ -0.28
HOM6	YJR139C	YFL064C	P43540	174 aa		13.32	□□□□□ -0.28
HOM6	YJR139C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	13.32	□□□□□ -0.28	not detected
HOM6	YJR139C	YNL247W	P53852	767 aa	Known RBP	13.32	□□□□□ -0.28
HOM6	YJR139C	IMP4	P53941	290 aa	Known RBP	13.32	□□□□□ -0.28
HOM6	YJR139C	YBL111C	Q3E7Y5	667 aa		13.32	□□□□□ -0.28
HOM6	YJR139C	PDR1	P12383	1068 aa		13.31	□□□□□ -0.28
HOM6	YJR139C	REV1	P12689	985 aa		13.31	□□□□□ -0.28
HOM6	YJR139C	PET123	P17558	318 aa		13.31	□□□□□ -0.28
HOM6	YJR139C	CKI1	P20485	582 aa		13.31	□□□□□ -0.28
HOM6	YJR139C	MET22	P32179	357 aa		13.31	□□□□□ -0.28
HOM6	YJR139C	STE5	P32917	917 aa		13.31	□□□□□ -0.28
HOM6	YJR139C	TIF5	P38431	405 aa	Known RBP	13.31	□□□□□ -0.28
HOM6	YJR139C	GGA2	P38817	585 aa	Known RBP	13.31	□□□□□ -0.28
HOM6	YJR139C	ERP2	P39704	215 aa		13.31	□□□□□ -0.28
HOM6	YJR139C	LCP5	P40079	357 aa	Predicted RBP	13.31	□□□□□ -0.28
HOM6	YJR139C	BST1	P43571	1029 aa		13.31	□□□□□ -0.28
HOM6	YJR139C	ATH1	P48016	1211 aa		13.31	□□□□□ -0.28
HOM6	YJR139C	PRP24	P49960	444 aa	Known RBP	13.31	□□□□□ -0.28
HOM6	YJR139C	YNR061C	P53747	219 aa		13.31	□□□□□ -0.28
HOM6	YJR139C	YPL014W	Q02606	381 aa		13.31	□□□□□ -0.28
HOM6	YJR139C	NGL3	Q03210	505 aa		13.31	□□□□□ -0.28
HOM6	YJR139C	YMR114C	Q04471	368 aa	Known RBP	13.31	□□□□□ -0.28
HOM6	YJR139C	KAP95	Q06142	861 aa	Known RBP	13.31	□□□□□ -0.28
HOM6	YJR139C	VAC14	Q06708	880 aa		13.31	□□□□□ -0.28
HOM6	YJR139C	KIN3	P22209	435 aa		13.3	□□□□□ -0.28
HOM6	YJR139C	TAN1	P53072	289 aa	Predicted RBP	13.3	□□□□□ -0.28
HOM6	YJR139C	RPN4	Q03465	531 aa		13.3	□□□□□ -0.28
HOM6	YJR139C	IZH4	Q99393	312 aa		13.3	□□□□□ -0.28
HOM6	YJR139C	FAB1	P34756	2278 aa		13.3	□□□□□ -0.28
HOM6	YJR139C	HIS1	P00498	297 aa	Known RBP	13.29	□□□□□ -0.28
HOM6	YJR139C	MEI4	P29467	408 aa		13.29	□□□□□ -0.28
HOM6	YJR139C	GPI10	P30777	616 aa		13.29	□□□□□ -0.28
HOM6	YJR139C	HXT3	P32466	567 aa	Known RBP	13.29	□□□□□ -0.28
HOM6	YJR139C	EDC3	P39998	551 aa	Known RBP	13.29	□□□□□ -0.28
HOM6	YJR139C	ERG10	P41338	398 aa	Known RBP	13.29	□□□□□ -0.28
HOM6	YJR139C	YDL073W	Q07454	984 aa		13.29	□□□□□ -0.28
HOM6	YJR139C	MPD2	Q99316	277 aa		13.29	□□□□□ -0.28
HOM6	YJR139C	HSF1	P10961	833 aa		13.28	□□□□□ -0.28
HOM6	YJR139C	PMS1	P14242	873 aa		13.28	□□□□□ -0.28
HOM6	YJR139C	HEM14	P40012	539 aa		13.28	□□□□□ -0.28
HOM6	YJR139C	EMW1	P42842	904 aa	Known RBP	13.28	□□□□□ -0.28
HOM6	YJR139C	RRT5	P43607	289 aa		13.28	□□□□□ -0.28
HOM6	YJR139C	RMD8	P43620	662 aa		13.28	□□□□□ -0.28
HOM6	YJR139C	SNG1	P46950	547 aa		13.28	□□□□□ -0.28
HOM6	YJR139C	BOP3	P53958	396 aa		13.28	□□□□□ -0.28
HOM6	YJR139C	YMR206W	Q03695	313 aa		13.28	□□□□□ -0.28
HOM6	YJR139C	YCS4	Q06156	1176 aa		13.28	□□□□□ -0.28
HOM6	YJR139C	FLC1	Q08967	793 aa		13.28	□□□□□ -0.28
HOM6	YJR139C	TOR2	P32600	2474 aa	Known RBP	13.28	□□□□□ -0.28
HOM6	YJR139C	ADY2	P25613	283 aa		13.27	□□□□□ -0.29
HOM6	YJR139C	YNR065C	P53751	1116 aa		13.27	□□□□□ -0.29
HOM6	YJR139C	DOS2	P54858	310 aa		13.27	□□□□□ -0.29
HOM6	YJR139C	THI7	Q05998	598 aa		13.27	□□□□□ -0.29
HOM6	YJR139C	RAD10	P06838	210 aa		13.26	□□□□□ -0.29
HOM6	YJR139C	SIS1	P25294	352 aa	Known RBP	13.26	□□□□□ -0.29
HOM6	YJR139C	PCA1	P38360	1216 aa		13.26	□□□□□ -0.29
HOM6	YJR139C	FLC2	P39719	783 aa		13.26	□□□□□ -0.29
HOM6	YJR139C	MRX6	P48564	524 aa		13.26	□□□□□ -0.29
HOM6	YJR139C	ADI1	Q03677	179 aa		13.26	□□□□□ -0.29
HOM6	YJR139C	SML1	Q04964	104 aa		13.26	□□□□□ -0.29
HOM6	YJR139C	NDD1	Q08887	554 aa		13.26	□□□□□ -0.29
HOM6	YJR139C	SPO21	Q12411	609 aa		13.26	□□□□□ -0.29
HOM6	YJR139C	CET1	O13297	549 aa	Predicted RBP	13.25	□□□□□ -0.29
HOM6	YJR139C	RPS9A	O13516	197 aa	Known RBP	13.25	□□□□□ -0.29
HOM6	YJR139C	TUB3	P09734	445 aa	Known RBP	13.25	□□□□□ -0.29
HOM6	YJR139C	ARF2	P19146	181 aa	Known RBP	13.25	□□□□□ -0.29
HOM6	YJR139C	YCR015C	P25616	317 aa		13.25	□□□□□ -0.29
HOM6	YJR139C	HXT5	P38695	592 aa		13.25	□□□□□ -0.29
HOM6	YJR139C	SAW1	P39735	261 aa		13.25	□□□□□ -0.29
HOM6	YJR139C	MNN11	P46985	422 aa	Known RBP	13.25	□□□□□ -0.29
HOM6	YJR139C	YML6	P51998	286 aa		13.25	□□□□□ -0.29
HOM6	YJR139C	TPO1	Q07824	586 aa		13.25	□□□□□ -0.29
HOM6	YJR139C	YLR012C	Q07927	99 aa		13.25	□□□□□ -0.29
HOM6	YJR139C	MEX67	Q99257	599 aa	Known RBP	13.25	□□□□□ -0.29
HOM6	YJR139C	SLY1	P22213	666 aa		13.24	□□□□□ -0.29
HOM6	YJR139C	AIM26	P32858	118 aa		13.24	□□□□□ -0.29
HOM6	YJR139C	KAP104	P38217	918 aa	Known RBP	13.24	□□□□□ -0.29
HOM6	YJR139C	VAC8	P39968	578 aa		13.24	□□□□□ -0.29
HOM6	YJR139C	YEL028W	P39989	153 aa		13.24	□□□□□ -0.29
HOM6	YJR139C	ARG2	P40360	574 aa		13.24	□□□□□ -0.29
HOM6	YJR139C	MKT1	P40850	830 aa	Known RBP	13.24	□□□□□ -0.29
HOM6	YJR139C	VEL1	P53058	206 aa		13.24	□□□□□ -0.29
HOM6	YJR139C	PEX15	Q08215	383 aa		13.24	□□□□□ -0.29
HOM6	YJR139C	GPM3	Q12326	303 aa		13.24	□□□□□ -0.29

Retrieved 100 of 5,963 RNA–protein pairs in 53.1 ms