RNA–Protein interactions for RNA: YGR038C-B

YGR038C-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR038C-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR038C-BYGR038C-B ERP6P53198 216 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B EFM5P53200 248 aaKnown RBP2.72□□□□□ -1.97
YGR038C-BYGR038C-B SNZ2P53824 298 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B FAP1P53971 965 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B YPL272CQ08984 517 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B DNF2Q12675 1612 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B STE4P18851 423 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B NAR1P23503 491 aaKnown RBP2.72□□□□□ -1.97
YGR038C-BYGR038C-B ACP1P32463 125 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B OAR1P35731 278 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B BET3P36149 193 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B GDS1P41913 522 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B NUP85P46673 744 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B AAD10P47182 288 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B PEX31P53203 462 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B PBP1P53297 722 aaKnown RBP2.72□□□□□ -1.97
YGR038C-BYGR038C-B MAL12P53341 584 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B GTR1Q00582 310 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B SEG1Q04279 960 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B PIB1Q06651 286 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
YGR038C-BYGR038C-B INP54Q08227 384 aaKnown RBP2.72□□□□□ -1.97
YGR038C-BYGR038C-B LDB17Q12342 491 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B GPR1Q12361 961 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B NOP56Q12460 504 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
YGR038C-BYGR038C-B CDC6P09119 513 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B YKR104WP0CE69 306 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B RAD18P10862 487 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B PDR1P12383 1068 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B CTF13P35203 478 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B MAL32P38158 584 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B LIN1P38852 340 aaPredicted RBP2.72□□□□□ -1.97
YGR038C-BYGR038C-B RPA34P47006 233 aaPredicted RBP2.72□□□□□ -1.97
YGR038C-BYGR038C-B VPS70P47161 811 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B UPF3P48412 387 aaKnown RBP2.72□□□□□ -1.97
YGR038C-BYGR038C-B MKC7P53379 596 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B OPT2Q06593 877 aa2.72□□□□□ -1.97
YGR038C-BYGR038C-B MSW1P04803 379 aa2.71□□□□□ -1.97
YGR038C-BYGR038C-B COR1P07256 457 aa2.71□□□□□ -1.97
YGR038C-BYGR038C-B MTF1P14908 341 aaKnown RBP2.71□□□□□ -1.97
YGR038C-BYGR038C-B SNT1P25357 1226 aa2.71□□□□□ -1.97
YGR038C-BYGR038C-B LHS1P36016 881 aa2.71□□□□□ -1.97
YGR038C-BYGR038C-B PIM1P36775 1133 aa2.71□□□□□ -1.97
YGR038C-BYGR038C-B CRG1P38892 291 aaRIP-Chip data2.71□□□□□ -1.97not detected
YGR038C-BYGR038C-B ASG1P40467 964 aa2.71□□□□□ -1.97
YGR038C-BYGR038C-B TY4A-JP47023 414 aa2.71□□□□□ -1.97
YGR038C-BYGR038C-B FMS1P50264 508 aa2.71□□□□□ -1.97
YGR038C-BYGR038C-B YML6P51998 286 aa2.71□□□□□ -1.97
YGR038C-BYGR038C-B YNL108CP53929 270 aa2.71□□□□□ -1.97
YGR038C-BYGR038C-B LRS4Q04087 347 aaKnown RBP2.71□□□□□ -1.97
YGR038C-BYGR038C-B BOP2Q06150 570 aa2.71□□□□□ -1.97
YGR038C-BYGR038C-B TDA5Q06417 326 aaKnown RBP2.71□□□□□ -1.97
YGR038C-BYGR038C-B PGC1Q08959 321 aa2.71□□□□□ -1.97
YGR038C-BYGR038C-B RTC5Q12108 567 aaKnown RBP2.71□□□□□ -1.97
YGR038C-BYGR038C-B STE12P13574 688 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B GRX2P17695 143 aaKnown RBP2.71□□□□□ -1.98
YGR038C-BYGR038C-B HSP60P19882 572 aaKnown RBP2.71□□□□□ -1.98
YGR038C-BYGR038C-B KTR1P27810 393 aaKnown RBP2.71□□□□□ -1.98
YGR038C-BYGR038C-B DBF4P32325 704 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B PMC1P38929 1173 aaPredicted RBP2.71□□□□□ -1.98
YGR038C-BYGR038C-B MAD3P47074 515 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B CTH1P47976 325 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B YDL186WP48568 277 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B MNT4P53745 580 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B YNL140CP53910 189 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B ORC4P54791 529 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B CIA1Q05583 330 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B YLR456WQ06199 204 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B GMC2Q06201 188 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B YPL191CQ08930 360 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B LEA1Q08963 238 aaPredicted RBP2.71□□□□□ -1.98
YGR038C-BYGR038C-B HEM2P05373 342 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B RPL7AP05737 244 aaKnown RBP2.71□□□□□ -1.98
YGR038C-BYGR038C-B UTR4P32626 227 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B STE5P32917 917 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B GDH2P33327 1092 aaKnown RBP2.71□□□□□ -1.98
YGR038C-BYGR038C-B SEC66P33754 206 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B STE13P33894 931 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B HEL1P36113 551 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B MAL33P38157 468 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B SUL1P38359 859 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B PRE3P38624 215 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B MIP6P38760 659 aaKnown RBP2.71□□□□□ -1.98
YGR038C-BYGR038C-B RET2P43621 546 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B SWC4P53201 476 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B RPA49Q01080 415 aaPredicted RBP2.71□□□□□ -1.98
YGR038C-BYGR038C-B MRPL13Q02204 264 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B SMA1Q02651 245 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B NUP53Q03790 475 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B SSL1Q04673 461 aaPredicted RBP2.71□□□□□ -1.98
YGR038C-BYGR038C-B CDA2Q06703 312 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B HRK1Q08732 759 aaKnown RBP2.71□□□□□ -1.98
YGR038C-BYGR038C-B RPL7BQ12213 244 aaKnown RBP2.71□□□□□ -1.98
YGR038C-BYGR038C-B COX6P00427 148 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B PRB1P09232 635 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B TEC1P18412 486 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B PRP6P19735 899 aaPredicted RBP2.71□□□□□ -1.98
YGR038C-BYGR038C-B TAF14P35189 244 aa2.71□□□□□ -1.98
YGR038C-BYGR038C-B MCR1P36060 302 aaKnown RBP2.71□□□□□ -1.98
YGR038C-BYGR038C-B KTR7P40504 517 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms