RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PGD1	YGL025C	MRI1	Q06489	411 aa	Known RBP	4.17	□□□□□ -1.74
PGD1	YGL025C	ULA1	Q12059	462 aa		4.17	□□□□□ -1.74
PGD1	YGL025C	COX11	P19516	300 aa	Known RBP	4.16	□□□□□ -1.74
PGD1	YGL025C	DHR2	P36009	735 aa	Predicted RBP	4.16	□□□□□ -1.74
PGD1	YGL025C	PIH1	P38768	344 aa		4.16	□□□□□ -1.74
PGD1	YGL025C	EAF5	P39995	279 aa		4.16	□□□□□ -1.74
PGD1	YGL025C	SPC105	P53148	917 aa		4.16	□□□□□ -1.74
PGD1	YGL025C	BUD17	P53727	317 aa		4.16	□□□□□ -1.74
PGD1	YGL025C	RPS15	Q01855	142 aa	Known RBP	4.16	□□□□□ -1.74
PGD1	YGL025C	SLK19	Q08581	821 aa	Known RBP	4.16	□□□□□ -1.74
PGD1	YGL025C	HOM2	P13663	365 aa	Known RBP	4.15	□□□□□ -1.75
PGD1	YGL025C	VPS33	P20795	691 aa		4.15	□□□□□ -1.75
PGD1	YGL025C	CAP1	P28495	268 aa	Known RBP	4.15	□□□□□ -1.75
PGD1	YGL025C	PAF1	P38351	445 aa		4.15	□□□□□ -1.75
PGD1	YGL025C	PEA2	P40091	420 aa		4.15	□□□□□ -1.75
PGD1	YGL025C	SLD3	P53135	668 aa		4.15	□□□□□ -1.75
PGD1	YGL025C	SQS1	P53866	767 aa	Known RBP	4.15	□□□□□ -1.75
PGD1	YGL025C	YNL018C	P53976	612 aa		4.15	□□□□□ -1.75
PGD1	YGL025C	FMP30	Q02883	468 aa		4.15	□□□□□ -1.75
PGD1	YGL025C	ECM38	Q05902	660 aa	Predicted RBP	4.15	□□□□□ -1.75
PGD1	YGL025C	CWC2	Q12046	339 aa	Predicted RBP	4.15	□□□□□ -1.75
PGD1	YGL025C	ZPS1	Q12512	249 aa		4.15	□□□□□ -1.75
PGD1	YGL025C	TUF1	P02992	437 aa	Known RBP	4.14	□□□□□ -1.75
PGD1	YGL025C	CPA2	P03965	1118 aa	Known RBP	4.14	□□□□□ -1.75
PGD1	YGL025C	MDM10	P18409	493 aa		4.14	□□□□□ -1.75
PGD1	YGL025C	PMA2	P19657	947 aa		4.14	□□□□□ -1.75
PGD1	YGL025C	AAD3	P25612	363 aa		4.14	□□□□□ -1.75
PGD1	YGL025C	YPT10	P38146	199 aa		4.14	□□□□□ -1.75
PGD1	YGL025C	YJL193W	P39542	402 aa		4.14	□□□□□ -1.75
PGD1	YGL025C	MNT2	P53059	558 aa		4.14	□□□□□ -1.75
PGD1	YGL025C	MTD1	Q02046	320 aa	Known RBP	4.14	□□□□□ -1.75
PGD1	YGL025C	YPL216W	Q08964	1102 aa		4.14	□□□□□ -1.75
PGD1	YGL025C	VPS5	Q92331	675 aa		4.14	□□□□□ -1.75
PGD1	YGL025C	CWH43	P25618	953 aa		4.13	□□□□□ -1.75
PGD1	YGL025C	RIM4	P38741	713 aa		4.13	□□□□□ -1.75
PGD1	YGL025C	TAX4	P47030	604 aa		4.13	□□□□□ -1.75
PGD1	YGL025C	COQ6	P53318	479 aa		4.13	□□□□□ -1.75
PGD1	YGL025C	USA1	Q03714	838 aa		4.13	□□□□□ -1.75
PGD1	YGL025C	YDL073W	Q07454	984 aa		4.13	□□□□□ -1.75
PGD1	YGL025C	RTK1	Q12100	620 aa	Predicted RBP	4.13	□□□□□ -1.75
PGD1	YGL025C	RPL7A	P05737	244 aa	Known RBP	4.12	□□□□□ -1.75
PGD1	YGL025C	PCK1	P10963	549 aa		4.12	□□□□□ -1.75
PGD1	YGL025C	WHI2	P12611	486 aa		4.12	□□□□□ -1.75
PGD1	YGL025C	PLC1	P32383	869 aa		4.12	□□□□□ -1.75
PGD1	YGL025C	ORC2	P32833	620 aa		4.12	□□□□□ -1.75
PGD1	YGL025C	CCL1	P37366	393 aa		4.12	□□□□□ -1.75
PGD1	YGL025C	EMP65	P40085	556 aa		4.12	□□□□□ -1.75
PGD1	YGL025C	MAD2	P40958	196 aa		4.12	□□□□□ -1.75
PGD1	YGL025C	PIP2	P52960	996 aa		4.12	□□□□□ -1.75
PGD1	YGL025C	PEX15	Q08215	383 aa		4.12	□□□□□ -1.75
PGD1	YGL025C	DIN7	Q12086	430 aa		4.12	□□□□□ -1.75
PGD1	YGL025C	RPL7B	Q12213	244 aa	Known RBP	4.12	□□□□□ -1.75
PGD1	YGL025C	ARG1	P22768	420 aa		4.11	□□□□□ -1.75
PGD1	YGL025C	TFC4	P33339	1025 aa		4.11	□□□□□ -1.75
PGD1	YGL025C	SAP4	P53036	818 aa		4.11	□□□□□ -1.75
PGD1	YGL025C	FOL1	P53848	824 aa		4.11	□□□□□ -1.75
PGD1	YGL025C	URA3	P03962	267 aa		4.1	□□□□□ -1.75
PGD1	YGL025C	ERG11	P10614	530 aa		4.1	□□□□□ -1.75
PGD1	YGL025C	MRC1	P25588	1096 aa		4.1	□□□□□ -1.75
PGD1	YGL025C	DSS4	P32601	143 aa		4.1	□□□□□ -1.75
PGD1	YGL025C	STL1	P39932	569 aa		4.1	□□□□□ -1.75
PGD1	YGL025C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
PGD1	YGL025C	TGS1	Q12052	315 aa		4.1	□□□□□ -1.75
PGD1	YGL025C	AI5_ALPHA	Q9ZZX1	630 aa		4.1	□□□□□ -1.75
PGD1	YGL025C	LOT5	P34234	306 aa		4.09	□□□□□ -1.75
PGD1	YGL025C	HOT13	P36078	116 aa		4.09	□□□□□ -1.75
PGD1	YGL025C	YFL015C	P43578	164 aa		4.09	□□□□□ -1.75
PGD1	YGL025C	PEX14	P53112	341 aa		4.09	□□□□□ -1.75
PGD1	YGL025C	HOL1	P53389	586 aa		4.09	□□□□□ -1.75
PGD1	YGL025C	YNR071C	P53757	342 aa		4.09	□□□□□ -1.75
PGD1	YGL025C	RIM13	Q03792	727 aa		4.09	□□□□□ -1.75
PGD1	YGL025C	SLX4	Q12098	748 aa		4.09	□□□□□ -1.75
PGD1	YGL025C	PGK1	P00560	416 aa	Known RBP	4.08	□□□□□ -1.76
PGD1	YGL025C	AQY1	P0CD91	305 aa		4.08	□□□□□ -1.76
PGD1	YGL025C	SSB1	P11484	613 aa	Known RBP	4.08	□□□□□ -1.76
PGD1	YGL025C	KAR1	P11927	433 aa		4.08	□□□□□ -1.76
PGD1	YGL025C	RNR3	P21672	869 aa	Known RBP	4.08	□□□□□ -1.76
PGD1	YGL025C	MBR1	P23493	339 aa		4.08	□□□□□ -1.76
PGD1	YGL025C	SSB2	P40150	613 aa	Known RBP	4.08	□□□□□ -1.76
PGD1	YGL025C	YIL092W	P40497	633 aa		4.08	□□□□□ -1.76
PGD1	YGL025C	MDR1	P53258	950 aa		4.08	□□□□□ -1.76
PGD1	YGL025C	SEG1	Q04279	960 aa		4.08	□□□□□ -1.76
PGD1	YGL025C	PHM6	Q05637	104 aa		4.08	□□□□□ -1.76
PGD1	YGL025C	SEC12	P11655	471 aa		4.07	□□□□□ -1.76
PGD1	YGL025C	APN1	P22936	367 aa		4.07	□□□□□ -1.76
PGD1	YGL025C	PET309	P32522	965 aa	Predicted RBP	4.07	□□□□□ -1.76
PGD1	YGL025C	EXO1	P39875	702 aa		4.07	□□□□□ -1.76
PGD1	YGL025C	SSP120	P39931	234 aa	Known RBP	4.07	□□□□□ -1.76
PGD1	YGL025C	COS12	P53053	380 aa		4.07	□□□□□ -1.76
PGD1	YGL025C	YNL092W	P53934	400 aa		4.07	□□□□□ -1.76
PGD1	YGL025C	HOF1	Q05080	669 aa		4.07	□□□□□ -1.76
PGD1	YGL025C	PCL8	Q08966	492 aa		4.07	□□□□□ -1.76
PGD1	YGL025C	HOS1	Q12214	470 aa		4.07	□□□□□ -1.76
PGD1	YGL025C	SEC3	P33332	1336 aa	Known RBP	4.06	□□□□□ -1.76
PGD1	YGL025C	AAC1	P04710	309 aa		4.06	□□□□□ -1.76
PGD1	YGL025C	HEM1	P09950	548 aa	Predicted RBP	4.06	□□□□□ -1.76
PGD1	YGL025C	YPK1	P12688	680 aa	Known RBP	4.06	□□□□□ -1.76
PGD1	YGL025C	BET2	P20133	325 aa		4.06	□□□□□ -1.76
PGD1	YGL025C	NUP1	P20676	1076 aa		4.06	□□□□□ -1.76
PGD1	YGL025C	CDC5	P32562	705 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms