RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C POM34Q12445 299 aa5.3□□□□□ -1.56
NUP42YDR192C MPD2Q99316 277 aa5.3□□□□□ -1.56
NUP42YDR192C RSF2P46974 1380 aa5.29□□□□□ -1.56
NUP42YDR192C FKS3Q04952 1785 aa5.29□□□□□ -1.56
NUP42YDR192C CDC26P14724 124 aa5.29□□□□□ -1.56
NUP42YDR192C PMI40P29952 429 aaKnown RBP5.29□□□□□ -1.56
NUP42YDR192C RIM4P38741 713 aa5.29□□□□□ -1.56
NUP42YDR192C SSP120P39931 234 aaKnown RBP5.29□□□□□ -1.56
NUP42YDR192C BIT61P47041 543 aa5.29□□□□□ -1.56
NUP42YDR192C TAF4P50105 388 aa5.29□□□□□ -1.56
NUP42YDR192C SPO1P53541 631 aa5.29□□□□□ -1.56
NUP42YDR192C MET14Q02196 202 aa5.29□□□□□ -1.56
NUP42YDR192C RNT1Q02555 471 aa5.29□□□□□ -1.56
NUP42YDR192C MLC2Q06580 163 aa5.29□□□□□ -1.56
NUP42YDR192C STP4Q07351 490 aa5.29□□□□□ -1.56
NUP42YDR192C BMS1Q08965 1183 aaKnown RBP5.29□□□□□ -1.56
NUP42YDR192C NTO1Q12311 748 aa5.29□□□□□ -1.56
NUP42YDR192C HRP1Q99383 534 aaKnown RBP5.29□□□□□ -1.56
NUP42YDR192C YRF1-4O13559 1382 aa5.29□□□□□ -1.56
NUP42YDR192C RPS9BP05755 195 aaKnown RBP5.28□□□□□ -1.56
NUP42YDR192C ERG4P25340 473 aa5.28□□□□□ -1.56
NUP42YDR192C HRR25P29295 494 aaKnown RBP5.28□□□□□ -1.56
NUP42YDR192C PTP2P29461 750 aa5.28□□□□□ -1.56
NUP42YDR192C YBR053CP38235 358 aa5.28□□□□□ -1.56
NUP42YDR192C REV7P38927 245 aa5.28□□□□□ -1.56
NUP42YDR192C NUP60P39705 539 aa5.28□□□□□ -1.56
NUP42YDR192C BUL1P48524 976 aa5.28□□□□□ -1.56
NUP42YDR192C RTT109Q07794 436 aa5.28□□□□□ -1.56
NUP42YDR192C NGL1Q08213 363 aaKnown RBP5.28□□□□□ -1.56
NUP42YDR192C PSF3Q12146 194 aa5.28□□□□□ -1.56
NUP42YDR192C RRP6Q12149 733 aaKnown RBP5.28□□□□□ -1.56
NUP42YDR192C TOP1P04786 769 aa5.27□□□□□ -1.57
NUP42YDR192C DAL5P15365 543 aa5.27□□□□□ -1.57
NUP42YDR192C IME1P21190 360 aa5.27□□□□□ -1.57
NUP42YDR192C HXT4P32467 576 aa5.27□□□□□ -1.57
NUP42YDR192C YPT7P32939 208 aa5.27□□□□□ -1.57
NUP42YDR192C DEF1P35732 738 aaKnown RBP5.27□□□□□ -1.57
NUP42YDR192C SDS22P36047 338 aa5.27□□□□□ -1.57
NUP42YDR192C SHM2P37291 469 aaKnown RBP5.27□□□□□ -1.57
NUP42YDR192C SAW1P39735 261 aa5.27□□□□□ -1.57
NUP42YDR192C NPR2P39923 615 aa5.27□□□□□ -1.57
NUP42YDR192C STL1P39932 569 aa5.27□□□□□ -1.57
NUP42YDR192C HOS4P40480 1083 aa5.27□□□□□ -1.57
NUP42YDR192C DOT5P40553 215 aa5.27□□□□□ -1.57
NUP42YDR192C IRC5P43610 853 aa5.27□□□□□ -1.57
NUP42YDR192C PIP2P52960 996 aa5.27□□□□□ -1.57
NUP42YDR192C HEF3P53978 1044 aaKnown RBP5.27□□□□□ -1.57
NUP42YDR192C MTD1Q02046 320 aaKnown RBP5.27□□□□□ -1.57
NUP42YDR192C ECM38Q05902 660 aaPredicted RBP5.27□□□□□ -1.57
NUP42YDR192C FRE5Q08908 694 aa5.27□□□□□ -1.57
NUP42YDR192C VPS5Q92331 675 aa5.27□□□□□ -1.57
NUP42YDR192C ECM3Q99252 613 aa5.27□□□□□ -1.57
NUP42YDR192C ROM2P51862 1356 aaKnown RBP5.27□□□□□ -1.57
NUP42YDR192C TY4B-HP0C2J7 1802 aa5.26□□□□□ -1.57
NUP42YDR192C TY4B-JP47024 1803 aa5.26□□□□□ -1.57
NUP42YDR192C TUF1P02992 437 aaKnown RBP5.26□□□□□ -1.57
NUP42YDR192C OSM1P21375 501 aaKnown RBP5.26□□□□□ -1.57
NUP42YDR192C ATP12P22135 325 aa5.26□□□□□ -1.57
NUP42YDR192C GET2P40056 285 aa5.26□□□□□ -1.57
NUP42YDR192C PIG2P40187 538 aa5.26□□□□□ -1.57
NUP42YDR192C YIL092WP40497 633 aa5.26□□□□□ -1.57
NUP42YDR192C BUD8P41698 603 aa5.26□□□□□ -1.57
NUP42YDR192C YJL163CP46996 555 aa5.26□□□□□ -1.57
NUP42YDR192C MTL1P53214 551 aa5.26□□□□□ -1.57
NUP42YDR192C YAP1802P53309 568 aa5.26□□□□□ -1.57
NUP42YDR192C RMT2Q03305 412 aa5.26□□□□□ -1.57
NUP42YDR192C RCR2Q03446 210 aaKnown RBP5.26□□□□□ -1.57
NUP42YDR192C ADY4Q05955 493 aa5.26□□□□□ -1.57
NUP42YDR192C VPS36Q06696 566 aa5.26□□□□□ -1.57
NUP42YDR192C ESC8Q08119 714 aa5.26□□□□□ -1.57
NUP42YDR192C CWC2Q12046 339 aaPredicted RBP5.26□□□□□ -1.57
NUP42YDR192C LYS2P07702 1392 aa5.26□□□□□ -1.57
NUP42YDR192C GAL1P04385 528 aa5.25□□□□□ -1.57
NUP42YDR192C YEL076C-AP0CX16 216 aa5.25□□□□□ -1.57
NUP42YDR192C YLR464WP0CX17 216 aa5.25□□□□□ -1.57
NUP42YDR192C HOP1P20050 605 aa5.25□□□□□ -1.57
NUP42YDR192C PRP28P23394 588 aa5.25□□□□□ -1.57
NUP42YDR192C PWP2P25635 923 aaKnown RBP5.25□□□□□ -1.57
NUP42YDR192C DPB3P27344 201 aa5.25□□□□□ -1.57
NUP42YDR192C MVD1P32377 396 aaKnown RBP5.25□□□□□ -1.57
NUP42YDR192C TRM2P33753 639 aa5.25□□□□□ -1.57
NUP42YDR192C YHR033WP38690 423 aa5.25□□□□□ -1.57
NUP42YDR192C FMO1P38866 432 aa5.25□□□□□ -1.57
NUP42YDR192C LYS9P38999 446 aa5.25□□□□□ -1.57
NUP42YDR192C YEL076CP39971 216 aa5.25□□□□□ -1.57
NUP42YDR192C FMP52P40008 231 aa5.25□□□□□ -1.57
NUP42YDR192C YNL195CP40168 261 aa5.25□□□□□ -1.57
NUP42YDR192C PHO23P50947 330 aa5.25□□□□□ -1.57
NUP42YDR192C UBC11P52492 156 aa5.25□□□□□ -1.57
NUP42YDR192C UBX4P54730 416 aa5.25□□□□□ -1.57
NUP42YDR192C HLR1Q04429 423 aa5.25□□□□□ -1.57
NUP42YDR192C SSP2Q08646 371 aa5.25□□□□□ -1.57
NUP42YDR192C PPR1P07272 904 aaPredicted RBP5.24□□□□□ -1.57
NUP42YDR192C PHO3P24031 467 aa5.24□□□□□ -1.57
NUP42YDR192C ERG6P25087 383 aaKnown RBP5.24□□□□□ -1.57
NUP42YDR192C NTH1P32356 751 aa5.24□□□□□ -1.57
NUP42YDR192C BCD1P38772 366 aa5.24□□□□□ -1.57
NUP42YDR192C SQS1P53866 767 aaKnown RBP5.24□□□□□ -1.57
NUP42YDR192C CEF1Q03654 590 aaPredicted RBP5.24□□□□□ -1.57
NUP42YDR192C OMS1Q06668 471 aa5.24□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 34.8 ms