RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeastyeast

Gene RUB1, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUB1YDR139C STE4P18851 423 aa4.34□□□□□ -1.71
RUB1YDR139C HOP1P20050 605 aa4.34□□□□□ -1.71
RUB1YDR139C VPS33P20795 691 aa4.34□□□□□ -1.71
RUB1YDR139C ADY2P25613 283 aa4.34□□□□□ -1.71
RUB1YDR139C CAP1P28495 268 aaKnown RBP4.34□□□□□ -1.71
RUB1YDR139C PPZ2P33329 710 aa4.34□□□□□ -1.71
RUB1YDR139C PIH1P38768 344 aa4.34□□□□□ -1.71
RUB1YDR139C YIL092WP40497 633 aa4.34□□□□□ -1.71
RUB1YDR139C PEX8P53248 589 aa4.34□□□□□ -1.71
RUB1YDR139C TRS23Q03784 219 aa4.34□□□□□ -1.71
RUB1YDR139C SND1Q04007 877 aa4.34□□□□□ -1.71
RUB1YDR139C YPL216WQ08964 1102 aa4.34□□□□□ -1.71
RUB1YDR139C TPK2P06245 380 aa4.33□□□□□ -1.72
RUB1YDR139C STE12P13574 688 aa4.33□□□□□ -1.72
RUB1YDR139C PHO3P24031 467 aa4.33□□□□□ -1.72
RUB1YDR139C ILV6P25605 309 aaKnown RBP4.33□□□□□ -1.72
RUB1YDR139C MRK1P50873 501 aa4.33□□□□□ -1.72
RUB1YDR139C YIP4P53093 235 aa4.33□□□□□ -1.72
RUB1YDR139C CNM67P53865 581 aaKnown RBP4.33□□□□□ -1.72
RUB1YDR139C HOS1Q12214 470 aa4.33□□□□□ -1.72
RUB1YDR139C PCK1P10963 549 aa4.32□□□□□ -1.72
RUB1YDR139C ARG1P22768 420 aa4.32□□□□□ -1.72
RUB1YDR139C CNE1P27825 502 aa4.32□□□□□ -1.72
RUB1YDR139C PET309P32522 965 aaPredicted RBP4.32□□□□□ -1.72
RUB1YDR139C SDS22P36047 338 aa4.32□□□□□ -1.72
RUB1YDR139C PMC1P38929 1173 aaPredicted RBP4.32□□□□□ -1.72
RUB1YDR139C SAW1P39735 261 aa4.32□□□□□ -1.72
RUB1YDR139C MAD2P40958 196 aa4.32□□□□□ -1.72
RUB1YDR139C ASN1P49089 572 aaKnown RBP4.32□□□□□ -1.72
RUB1YDR139C YNR071CP53757 342 aa4.32□□□□□ -1.72
RUB1YDR139C TGL2P54857 326 aa4.32□□□□□ -1.72
RUB1YDR139C YDL073WQ07454 984 aa4.32□□□□□ -1.72
RUB1YDR139C TGS1Q12052 315 aa4.32□□□□□ -1.72
RUB1YDR139C NUR1Q12066 484 aa4.32□□□□□ -1.72
RUB1YDR139C RTK1Q12100 620 aaPredicted RBP4.32□□□□□ -1.72
RUB1YDR139C URA3P03962 267 aa4.31□□□□□ -1.72
RUB1YDR139C TUB1P09733 447 aaKnown RBP4.31□□□□□ -1.72
RUB1YDR139C RPA135P22138 1203 aaKnown RBP4.31□□□□□ -1.72
RUB1YDR139C SAT4P25333 603 aaKnown RBP4.31□□□□□ -1.72
RUB1YDR139C DSS4P32601 143 aa4.31□□□□□ -1.72
RUB1YDR139C NIC96P34077 839 aa4.31□□□□□ -1.72
RUB1YDR139C TAF5P38129 798 aa4.31□□□□□ -1.72
RUB1YDR139C RIM4P38741 713 aa4.31□□□□□ -1.72
RUB1YDR139C RIX1P38883 763 aaPredicted RBP4.31□□□□□ -1.72
RUB1YDR139C PAC2P39937 518 aa4.31□□□□□ -1.72
RUB1YDR139C BUD17P53727 317 aa4.31□□□□□ -1.72
RUB1YDR139C ARO10Q06408 635 aa4.31□□□□□ -1.72
RUB1YDR139C DIN7Q12086 430 aa4.31□□□□□ -1.72
RUB1YDR139C ZPS1Q12512 249 aa4.31□□□□□ -1.72
RUB1YDR139C MPD2Q99316 277 aa4.31□□□□□ -1.72
RUB1YDR139C BNR1P40450 1375 aa4.3□□□□□ -1.72
RUB1YDR139C UGP1P32861 499 aaKnown RBP4.3□□□□□ -1.72
RUB1YDR139C TGL1P34163 548 aa4.3□□□□□ -1.72
RUB1YDR139C LOT5P34234 306 aa4.3□□□□□ -1.72
RUB1YDR139C CCL1P37366 393 aa4.3□□□□□ -1.72
RUB1YDR139C CPR8P53728 308 aa4.3□□□□□ -1.72
RUB1YDR139C RPS15Q01855 142 aaKnown RBP4.3□□□□□ -1.72
RUB1YDR139C TRI1Q05024 226 aa4.3□□□□□ -1.72
RUB1YDR139C BET2P20133 325 aa4.29□□□□□ -1.72
RUB1YDR139C SCS2P40075 244 aaKnown RBP4.29□□□□□ -1.72
RUB1YDR139C ASK10P48361 1146 aa4.29□□□□□ -1.72
RUB1YDR139C PUS4P48567 403 aaKnown RBP4.29□□□□□ -1.72
RUB1YDR139C YGL117WP53133 265 aa4.29□□□□□ -1.72
RUB1YDR139C USA1Q03714 838 aa4.29□□□□□ -1.72
RUB1YDR139C ULA1Q12059 462 aa4.29□□□□□ -1.72
RUB1YDR139C DBP10Q12389 995 aaKnown RBP4.29□□□□□ -1.72
RUB1YDR139C VAS1P07806 1104 aaKnown RBP4.28□□□□□ -1.72
RUB1YDR139C CBP3P21560 335 aa4.28□□□□□ -1.72
RUB1YDR139C CUE2P36075 443 aaKnown RBP4.28□□□□□ -1.72
RUB1YDR139C ATF1P40353 525 aa4.28□□□□□ -1.72
RUB1YDR139C GSM1P42950 618 aa4.28□□□□□ -1.72
RUB1YDR139C COQ6P53318 479 aa4.28□□□□□ -1.72
RUB1YDR139C HOF1Q05080 669 aa4.28□□□□□ -1.72
RUB1YDR139C SLK19Q08581 821 aaKnown RBP4.28□□□□□ -1.72
RUB1YDR139C CPA2P03965 1118 aaKnown RBP4.27□□□□□ -1.73
RUB1YDR139C ADE5,7P07244 802 aaKnown RBP4.27□□□□□ -1.73
RUB1YDR139C SST2P11972 698 aaKnown RBP4.27□□□□□ -1.73
RUB1YDR139C WHI2P12611 486 aa4.27□□□□□ -1.73
RUB1YDR139C VPS34P22543 875 aa4.27□□□□□ -1.73
RUB1YDR139C YMC1P32331 307 aa4.27□□□□□ -1.73
RUB1YDR139C YKL133CP36066 463 aa4.27□□□□□ -1.73
RUB1YDR139C YLF2P38746 405 aa4.27□□□□□ -1.73
RUB1YDR139C ATG36P46983 293 aa4.27□□□□□ -1.73
RUB1YDR139C GFD1Q04839 188 aaKnown RBP4.27□□□□□ -1.73
RUB1YDR139C ARP7Q12406 477 aa4.27□□□□□ -1.73
RUB1YDR139C ATP4P05626 244 aa4.26□□□□□ -1.73
RUB1YDR139C ADH4P10127 382 aa4.26□□□□□ -1.73
RUB1YDR139C FLO10P36170 1169 aa4.26□□□□□ -1.73
RUB1YDR139C SAP4P53036 818 aa4.26□□□□□ -1.73
RUB1YDR139C TAN1P53072 289 aaPredicted RBP4.26□□□□□ -1.73
RUB1YDR139C IMO32P53219 342 aa4.26□□□□□ -1.73
RUB1YDR139C CEG1Q01159 459 aaPredicted RBP4.26□□□□□ -1.73
RUB1YDR139C MET14Q02196 202 aa4.26□□□□□ -1.73
RUB1YDR139C FMP30Q02883 468 aa4.26□□□□□ -1.73
RUB1YDR139C ARG7Q04728 441 aa4.26□□□□□ -1.73
RUB1YDR139C RPL7AP05737 244 aaKnown RBP4.25□□□□□ -1.73
RUB1YDR139C PRP45P28004 379 aaPredicted RBP4.25□□□□□ -1.73
RUB1YDR139C SWD1P39706 426 aa4.25□□□□□ -1.73
RUB1YDR139C IMA5P40884 581 aa4.25□□□□□ -1.73
RUB1YDR139C COS12P53053 380 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms