RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B SPC97P38863 823 aa2.39□□□□□ -2.03
HTL1YCR020W-B OSW7P43611 510 aa2.39□□□□□ -2.03
HTL1YCR020W-B TPO3Q06451 622 aa2.39□□□□□ -2.03
HTL1YCR020W-B BSP1Q06604 576 aa2.39□□□□□ -2.03
HTL1YCR020W-B NEW1Q08972 1196 aaKnown RBP2.39□□□□□ -2.03
HTL1YCR020W-B AIM41Q12032 185 aa2.39□□□□□ -2.03
HTL1YCR020W-B RDL1Q12305 139 aaKnown RBP2.39□□□□□ -2.03
HTL1YCR020W-B RPS21BQ3E754 87 aaKnown RBP2.39□□□□□ -2.03
HTL1YCR020W-B YPR089WO13585 888 aa2.38□□□□□ -2.03
HTL1YCR020W-B CAP1P28495 268 aaKnown RBP2.38□□□□□ -2.03
HTL1YCR020W-B SFP1P32432 683 aa2.38□□□□□ -2.03
HTL1YCR020W-B BRN1P38170 754 aa2.38□□□□□ -2.03
HTL1YCR020W-B CKB2P38930 258 aa2.38□□□□□ -2.03
HTL1YCR020W-B YIL092WP40497 633 aa2.38□□□□□ -2.03
HTL1YCR020W-B PRM2P40534 656 aa2.38□□□□□ -2.03
HTL1YCR020W-B SAP4P53036 818 aa2.38□□□□□ -2.03
HTL1YCR020W-B LSC1P53598 329 aaKnown RBP2.38□□□□□ -2.03
HTL1YCR020W-B RPS15Q01855 142 aaKnown RBP2.38□□□□□ -2.03
HTL1YCR020W-B YPL071CQ02864 156 aa2.38□□□□□ -2.03
HTL1YCR020W-B PRP19P32523 503 aaKnown RBP2.37□□□□□ -2.03
HTL1YCR020W-B GCS1P35197 352 aa2.37□□□□□ -2.03
HTL1YCR020W-B CCL1P37366 393 aa2.37□□□□□ -2.03
HTL1YCR020W-B FLO5P38894 1075 aa2.37□□□□□ -2.03
HTL1YCR020W-B MGS1P40151 587 aa2.37□□□□□ -2.03
HTL1YCR020W-B YJR096WP47137 282 aa2.37□□□□□ -2.03
HTL1YCR020W-B YGR153WP48238 217 aa2.37□□□□□ -2.03
HTL1YCR020W-B YHM2Q04013 314 aa2.37□□□□□ -2.03
HTL1YCR020W-B HLR1Q04429 423 aa2.37□□□□□ -2.03
HTL1YCR020W-B YCG1Q06680 1035 aa2.37□□□□□ -2.03
HTL1YCR020W-B YLR111WQ12528 110 aa2.37□□□□□ -2.03
HTL1YCR020W-B BI2P03873 423 aa2.36□□□□□ -2.03
HTL1YCR020W-B YPK1P12688 680 aaKnown RBP2.36□□□□□ -2.03
HTL1YCR020W-B HOP1P20050 605 aa2.36□□□□□ -2.03
HTL1YCR020W-B GSY2P27472 705 aa2.36□□□□□ -2.03
HTL1YCR020W-B YPT10P38146 199 aa2.36□□□□□ -2.03
HTL1YCR020W-B YIL024CP40543 189 aa2.36□□□□□ -2.03
HTL1YCR020W-B IES1P43579 692 aa2.36□□□□□ -2.03
HTL1YCR020W-B NSE5Q03718 556 aa2.36□□□□□ -2.03
HTL1YCR020W-B ARR3Q06598 404 aa2.36□□□□□ -2.03
HTL1YCR020W-B AHA1Q12449 350 aaKnown RBP2.36□□□□□ -2.03
HTL1YCR020W-B AIM44Q99299 758 aa2.36□□□□□ -2.03
HTL1YCR020W-B MGM1P32266 881 aa2.35□□□□□ -2.03
HTL1YCR020W-B LRO1P40345 661 aa2.35□□□□□ -2.03
HTL1YCR020W-B MAF1P41910 395 aa2.35□□□□□ -2.03
HTL1YCR020W-B IRC7P43623 340 aa2.35□□□□□ -2.03
HTL1YCR020W-B SAE2P46946 345 aa2.35□□□□□ -2.03
HTL1YCR020W-B GIS2P53849 153 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
HTL1YCR020W-B MRPL1Q04599 285 aa2.35□□□□□ -2.03
HTL1YCR020W-B MRN1Q08925 612 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
HTL1YCR020W-B PCL8Q08966 492 aa2.35□□□□□ -2.03
HTL1YCR020W-B PCK1P10963 549 aa2.34□□□□□ -2.03
HTL1YCR020W-B RPL8AP17076 256 aaKnown RBP2.34□□□□□ -2.03
HTL1YCR020W-B FAT1P38225 669 aa2.34□□□□□ -2.03
HTL1YCR020W-B HXT6P39003 570 aaKnown RBP2.34□□□□□ -2.03
HTL1YCR020W-B HXT7P39004 570 aa2.34□□□□□ -2.03
HTL1YCR020W-B YMR124WP39523 943 aaKnown RBP2.34□□□□□ -2.03
HTL1YCR020W-B YJL193WP39542 402 aa2.34□□□□□ -2.03
HTL1YCR020W-B VID28P40547 921 aa2.34□□□□□ -2.03
HTL1YCR020W-B TDA10P42938 290 aa2.34□□□□□ -2.03
HTL1YCR020W-B ECM9Q02202 377 aa2.34□□□□□ -2.03
HTL1YCR020W-B NUP53Q03790 475 aa2.34□□□□□ -2.03
HTL1YCR020W-B SNA4Q07549 140 aa2.34□□□□□ -2.03
HTL1YCR020W-B HMG2P12684 1045 aa2.33□□□□□ -2.04
HTL1YCR020W-B BET2P20133 325 aa2.33□□□□□ -2.04
HTL1YCR020W-B DGR2P32330 852 aa2.33□□□□□ -2.04
HTL1YCR020W-B MTC7P32633 139 aa2.33□□□□□ -2.04
HTL1YCR020W-B TYS1P36421 394 aaKnown RBP2.33□□□□□ -2.04
HTL1YCR020W-B CCT4P39078 528 aaKnown RBP2.33□□□□□ -2.04
HTL1YCR020W-B HLJ1P48353 224 aa2.33□□□□□ -2.04
HTL1YCR020W-B YDL183CP48569 320 aa2.33□□□□□ -2.04
HTL1YCR020W-B COP1P53622 1201 aaKnown RBP2.33□□□□□ -2.04
HTL1YCR020W-B SQS1P53866 767 aaKnown RBP2.33□□□□□ -2.04
HTL1YCR020W-B USA1Q03714 838 aa2.33□□□□□ -2.04
HTL1YCR020W-B HRD3Q05787 833 aa2.33□□□□□ -2.04
HTL1YCR020W-B SPN1Q06505 410 aaPredicted RBP2.33□□□□□ -2.04
HTL1YCR020W-B PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
HTL1YCR020W-B NOP14Q99207 810 aaKnown RBP2.33□□□□□ -2.04
HTL1YCR020W-B RPS21AP0C0V8 87 aaKnown RBP2.32□□□□□ -2.04
HTL1YCR020W-B YER190C-BP0CX94 160 aa2.32□□□□□ -2.04
HTL1YCR020W-B YEL077W-AP0CX95 160 aa2.32□□□□□ -2.04
HTL1YCR020W-B YGR296C-BP0CX96 160 aa2.32□□□□□ -2.04
HTL1YCR020W-B YPL283W-BP0CX97 160 aa2.32□□□□□ -2.04
HTL1YCR020W-B YPR204C-AP0CX98 160 aa2.32□□□□□ -2.04
HTL1YCR020W-B NOP1P15646 327 aaKnown RBP2.32□□□□□ -2.04
HTL1YCR020W-B VPS33P20795 691 aa2.32□□□□□ -2.04
HTL1YCR020W-B PPG1P32838 368 aa2.32□□□□□ -2.04
HTL1YCR020W-B RMA1P36001 430 aaKnown RBP2.32□□□□□ -2.04
HTL1YCR020W-B OAF3P36023 863 aa2.32□□□□□ -2.04
HTL1YCR020W-B YAT2P40017 923 aa2.32□□□□□ -2.04
HTL1YCR020W-B CFD1P40558 293 aa2.32□□□□□ -2.04
HTL1YCR020W-B YIR016WP40572 265 aa2.32□□□□□ -2.04
HTL1YCR020W-B PTA1Q01329 785 aaPredicted RBP2.32□□□□□ -2.04
HTL1YCR020W-B BUD7Q08754 746 aa2.32□□□□□ -2.04
HTL1YCR020W-B ADR1P07248 1323 aa2.32□□□□□ -2.04
HTL1YCR020W-B AAC1P04710 309 aa2.31□□□□□ -2.04
HTL1YCR020W-B SEC12P11655 471 aa2.31□□□□□ -2.04
HTL1YCR020W-B CDC26P14724 124 aa2.31□□□□□ -2.04
HTL1YCR020W-B YJU2P28320 278 aaPredicted RBP2.31□□□□□ -2.04
HTL1YCR020W-B MF(ALPHA)2P32435 120 aa2.31□□□□□ -2.04
HTL1YCR020W-B OAF1P39720 1047 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms