RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHC1	YBR235W	ERG12	P07277	443 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	GLN4	P13188	809 aa	Known RBP	4.74	□□□□□ -1.65
VHC1	YBR235W	POL3	P15436	1097 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	GRX2	P17695	143 aa	Known RBP	4.74	□□□□□ -1.65
VHC1	YBR235W	DIT1	P21623	536 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	CMK1	P27466	446 aa	Known RBP	4.74	□□□□□ -1.65
VHC1	YBR235W	ASF2	P32448	525 aa	Predicted RBP	4.74	□□□□□ -1.65
VHC1	YBR235W	HES1	P35843	434 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	RXT2	P38255	430 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	RRP8	P38961	392 aa	Known RBP	4.74	□□□□□ -1.65
VHC1	YBR235W	SPO22	P40511	975 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	IRC4	Q03036	179 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	NTG2	Q08214	380 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	TRM8	Q12009	286 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	DAS2	Q12084	232 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	MCD1	Q12158	566 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	DBP5	P20449	482 aa	Known RBP	4.74	□□□□□ -1.65
VHC1	YBR235W	PDC6	P26263	563 aa	Known RBP	4.74	□□□□□ -1.65
VHC1	YBR235W	GCD7	P32502	381 aa	Predicted RBP	4.74	□□□□□ -1.65
VHC1	YBR235W	YBL055C	P34220	418 aa	Predicted RBP	4.74	□□□□□ -1.65
VHC1	YBR235W	ADE17	P38009	592 aa	Known RBP	4.74	□□□□□ -1.65
VHC1	YBR235W	YAP3	P38749	330 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	JEM1	P40358	645 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	SBE2	P42223	864 aa	Known RBP	4.74	□□□□□ -1.65
VHC1	YBR235W	EMW1	P42842	904 aa	Known RBP	4.74	□□□□□ -1.65
VHC1	YBR235W	IES1	P43579	692 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	MSE1	P48525	536 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	MNT4	P53745	580 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	DID2	P69771	204 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	OSH6	Q02201	448 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	BNA7	Q04066	261 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	LOT6	Q07923	191 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	YPL191C	Q08930	360 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	ICL2	Q12031	575 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	FMP16	Q12497	93 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	GPH1	P06738	902 aa	Known RBP	4.74	□□□□□ -1.65
VHC1	YBR235W	STE3	P06783	470 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	ILV6	P25605	309 aa	Known RBP	4.74	□□□□□ -1.65
VHC1	YBR235W	DAL80	P26343	269 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	LYP1	P32487	611 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	NIP1	P32497	812 aa	Known RBP	4.74	□□□□□ -1.65
VHC1	YBR235W	UTP30	P36144	274 aa	Known RBP	4.74	□□□□□ -1.65
VHC1	YBR235W	RFS1	P38234	210 aa	Known RBP	4.74	□□□□□ -1.65
VHC1	YBR235W	GLO3	P38682	493 aa	Known RBP	4.74	□□□□□ -1.65
VHC1	YBR235W	SEC28	P40509	296 aa	Known RBP	4.74	□□□□□ -1.65
VHC1	YBR235W	YIL055C	P40523	627 aa	Known RBP	4.74	□□□□□ -1.65
VHC1	YBR235W	TED1	P40533	473 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	LYS14	P40971	790 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	POL31	P46957	487 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	MRPL50	P53724	139 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	CAF120	P53836	1060 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	SRT1	Q03175	343 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	RAX1	Q08760	435 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	RAD59	Q12223	238 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	TSC13	Q99190	310 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	YLR278C	Q05854	1341 aa		4.74	□□□□□ -1.65
VHC1	YBR235W	PUT2	P07275	575 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	VPS33	P20795	691 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	GRX4	P32642	244 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	NIC96	P34077	839 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	KTR4	P38131	464 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	CHK1	P38147	527 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	ALG14	P38242	237 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	YJL070C	P40361	888 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	YFH7	P43591	353 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	UPF3	P48412	387 aa	Known RBP	4.73	□□□□□ -1.65
VHC1	YBR235W	USE1	P53146	245 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	CPR6	P53691	371 aa	Known RBP	4.73	□□□□□ -1.65
VHC1	YBR235W	ASI2	P53895	289 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	SAS4	Q04003	481 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	GFD1	Q04839	188 aa	Known RBP	4.73	□□□□□ -1.65
VHC1	YBR235W	EAF1	Q06337	982 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	WHI4	Q07655	649 aa	Known RBP	4.73	□□□□□ -1.65
VHC1	YBR235W	IPP1	P00817	287 aa	Known RBP	4.73	□□□□□ -1.65
VHC1	YBR235W	SIR3	P06701	978 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	GAL3	P13045	520 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	PEX3	P28795	441 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	MRS6	P32864	603 aa	Known RBP	4.73	□□□□□ -1.65
VHC1	YBR235W	ANR2	P36090	516 aa	Predicted RBP	4.73	□□□□□ -1.65
VHC1	YBR235W	PDX3	P38075	228 aa	Known RBP	4.73	□□□□□ -1.65
VHC1	YBR235W	YBR139W	P38109	508 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	TRM5	P38793	499 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	CST6	P40535	587 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	FMP48	P53233	369 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	CAF40	P53829	373 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	VAC7	P53950	1165 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	SIW14	P53965	281 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	DLT1	Q04216	342 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	MF(ALPHA)1	P01149	165 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	URA3	P03962	267 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	GAL1	P04385	528 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	CDC24	P11433	854 aa	Predicted RBP	4.73	□□□□□ -1.65
VHC1	YBR235W	CIN8	P27895	1000 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	ICL1	P28240	557 aa	Predicted RBP	4.73	□□□□□ -1.65
VHC1	YBR235W	MRT4	P33201	236 aa	Known RBP	4.73	□□□□□ -1.65
VHC1	YBR235W	PRP40	P33203	583 aa	Known RBP	4.73	□□□□□ -1.65
VHC1	YBR235W	RPC25	P35718	212 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	NUP133	P36161	1157 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	SMF2	P38778	549 aa		4.73	□□□□□ -1.65
VHC1	YBR235W	EPL1	P43572	832 aa		4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 8 ms