RNA–Protein interactions for RNA: ENST00000641936.1

TRIM16L-216, Transcript of tripartite motif containing 16 like, humanhuman

Gene TRIM16L, Length 2,048 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16L-216ENST00000641936 CCDC26Q8TAB7 109 aa11.85□□□□□ -0.51
TRIM16L-216ENST00000641936 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.85□□□□□ -0.51
TRIM16L-216ENST00000641936 ORC3Q9UBD5 711 aaPredicted RBP11.85□□□□□ -0.51
TRIM16L-216ENST00000641936 ASAP1Q9ULH1 1129 aa11.85□□□□□ -0.51
TRIM16L-216ENST00000641936 CDC25BP30305 580 aa11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 LRMPQ12912 555 aa11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 CCDC158Q5M9N0 1113 aa11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 CNTROBQ8N137 903 aa11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 ZNF526Q8TF50 670 aaPredicted RBP11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 SYTL4Q96C24 671 aaPredicted RBP11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 GPATCH3Q96I76 525 aa11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 METTL22Q9BUU2 404 aaPredicted RBP11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 CPSF2Q9P2I0 782 aaKnown RBP11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 KINO60870 393 aaKnown RBP11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 PTCD1O75127 700 aaKnown RBP11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 CAND2O75155 1236 aa11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 TBC1D8O95759 1140 aa11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 MYL6BP14649 208 aa11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 PAX7P23759 505 aa11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 DDR1Q08345 913 aa11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 TBC1D8BQ0IIM8 1120 aa11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 COPS6Q7L5N1 327 aa11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 XAGE3Q8WTP9 111 aa11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 IL17RAQ96F46 866 aa11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 SUCLG2Q96I99 432 aa11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 SRRTQ9BXP5 876 aaKnown RBP11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 USP16Q9Y5T5 823 aa11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 LAMB4A4D0S4 1761 aa11.84□□□□□ -0.51
TRIM16L-216ENST00000641936 A6NJR5 290 aa11.83□□□□□ -0.52
TRIM16L-216ENST00000641936 NEURL1BA8MQ27 555 aa11.83□□□□□ -0.52
TRIM16L-216ENST00000641936 CCP110O43303 1012 aa11.83□□□□□ -0.52
TRIM16L-216ENST00000641936 GLRX3O76003 335 aaKnown RBP11.83□□□□□ -0.52
TRIM16L-216ENST00000641936 IGKV5-2P06315 115 aa11.83□□□□□ -0.52
TRIM16L-216ENST00000641936 SETSIPP0DME0 302 aa11.83□□□□□ -0.52
TRIM16L-216ENST00000641936 NF2P35240 595 aa11.83□□□□□ -0.52
TRIM16L-216ENST00000641936 MCM2P49736 904 aa11.83□□□□□ -0.52
TRIM16L-216ENST00000641936 RBBP5Q15291 538 aaKnown RBP11.83□□□□□ -0.52
TRIM16L-216ENST00000641936 CCDC93Q567U6 631 aa11.83□□□□□ -0.52
TRIM16L-216ENST00000641936 TSHZ1Q6ZSZ6 1077 aa11.83□□□□□ -0.52
TRIM16L-216ENST00000641936 LRP10Q7Z4F1 713 aa11.83□□□□□ -0.52
TRIM16L-216ENST00000641936 DRC7Q8IY82 874 aa11.83□□□□□ -0.52
TRIM16L-216ENST00000641936 SEPT12Q8IYM1 358 aa11.83□□□□□ -0.52
TRIM16L-216ENST00000641936 FAM200AQ8TCP9 573 aa11.83□□□□□ -0.52
TRIM16L-216ENST00000641936 UBXN4Q92575 508 aa11.83□□□□□ -0.52
TRIM16L-216ENST00000641936 ACSBG1Q96GR2 724 aa11.83□□□□□ -0.52
TRIM16L-216ENST00000641936 TMX4Q9H1E5 349 aaPredicted RBP11.83□□□□□ -0.52
TRIM16L-216ENST00000641936 ANO2Q9NQ90 1003 aa11.83□□□□□ -0.52
TRIM16L-216ENST00000641936 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.83□□□□□ -0.52
TRIM16L-216ENST00000641936 PPFIA4O75335 1185 aa11.82□□□□□ -0.52
TRIM16L-216ENST00000641936 CCDC192P0DO97 292 aa11.82□□□□□ -0.52
TRIM16L-216ENST00000641936 GPTP24298 496 aa11.82□□□□□ -0.52
TRIM16L-216ENST00000641936 ANKRD13DQ6ZTN6 518 aa11.82□□□□□ -0.52
TRIM16L-216ENST00000641936 USP48Q86UV5 1035 aa11.82□□□□□ -0.52
TRIM16L-216ENST00000641936 ARMC2Q8NEN0 867 aa11.82□□□□□ -0.52
TRIM16L-216ENST00000641936 FAM117AQ9C073 453 aa11.82□□□□□ -0.52
TRIM16L-216ENST00000641936 BICC1Q9H694 974 aaKnown RBP11.82□□□□□ -0.52
TRIM16L-216ENST00000641936 ZCCHC17Q9NP64 241 aaKnown RBP11.82□□□□□ -0.52
TRIM16L-216ENST00000641936 MRPL12P52815 198 aaKnown RBP11.82□□□□□ -0.52
TRIM16L-216ENST00000641936 UBE2HP62256 183 aa11.82□□□□□ -0.52
TRIM16L-216ENST00000641936 CCT2P78371 535 aaKnown RBP11.82□□□□□ -0.52
TRIM16L-216ENST00000641936 GCKRQ14397 625 aa11.82□□□□□ -0.52
TRIM16L-216ENST00000641936 PLA2G4DQ86XP0 818 aa11.82□□□□□ -0.52
TRIM16L-216ENST00000641936 MSL3Q8N5Y2 521 aaKnown RBP11.82□□□□□ -0.52
TRIM16L-216ENST00000641936 ZNF483Q8TF39 744 aaPredicted RBP11.82□□□□□ -0.52
TRIM16L-216ENST00000641936 KAZALD1Q96I82 304 aa11.82□□□□□ -0.52
TRIM16L-216ENST00000641936 GADD45BO75293 160 aaPredicted RBP11.81□□□□□ -0.52
TRIM16L-216ENST00000641936 IFIT2P09913 472 aaKnown RBP11.81□□□□□ -0.52
TRIM16L-216ENST00000641936 RDXP35241 583 aaKnown RBP11.81□□□□□ -0.52
TRIM16L-216ENST00000641936 ZNF75DP51815 510 aa11.81□□□□□ -0.52
TRIM16L-216ENST00000641936 CC2D1AQ6P1N0 951 aaPredicted RBP11.81□□□□□ -0.52
TRIM16L-216ENST00000641936 POTEDQ86YR6 584 aa11.81□□□□□ -0.52
TRIM16L-216ENST00000641936 MYD88Q99836 296 aa11.81□□□□□ -0.52
TRIM16L-216ENST00000641936 ECHDC1Q9NTX5 307 aa11.81□□□□□ -0.52
TRIM16L-216ENST00000641936 COL15A1P39059 1388 aa11.81□□□□□ -0.52
TRIM16L-216ENST00000641936 MYBL2P10244 700 aa11.81□□□□□ -0.52
TRIM16L-216ENST00000641936 G3BP1Q13283 466 aaKnown RBP eCLIP11.81□□□□□ -0.52
TRIM16L-216ENST00000641936 KCNV1Q6PIU1 500 aa11.81□□□□□ -0.52
TRIM16L-216ENST00000641936 ANKRD18AQ8IVF6 992 aa11.81□□□□□ -0.52
TRIM16L-216ENST00000641936 CTCFLQ8NI51 663 aaPredicted RBP11.81□□□□□ -0.52
TRIM16L-216ENST00000641936 N4BP2L2Q92802 583 aaPredicted RBP11.81□□□□□ -0.52
TRIM16L-216ENST00000641936 TMX3Q96JJ7 454 aa11.81□□□□□ -0.52
TRIM16L-216ENST00000641936 NPHP1O15259 732 aa11.8□□□□□ -0.52
TRIM16L-216ENST00000641936 KCNQ2O43526 872 aa11.8□□□□□ -0.52
TRIM16L-216ENST00000641936 PPFIA2O75334 1257 aa11.8□□□□□ -0.52
TRIM16L-216ENST00000641936 SASH3O75995 380 aa11.8□□□□□ -0.52
TRIM16L-216ENST00000641936 SNUPNO95149 360 aaKnown RBP11.8□□□□□ -0.52
TRIM16L-216ENST00000641936 CPLX2Q6PUV4 134 aaKnown RBP11.8□□□□□ -0.52
TRIM16L-216ENST00000641936 CACTINQ8WUQ7 758 aaKnown RBP11.8□□□□□ -0.52
TRIM16L-216ENST00000641936 FBXW7Q969H0 707 aa11.8□□□□□ -0.52
TRIM16L-216ENST00000641936 CHAMP1Q96JM3 812 aa11.8□□□□□ -0.52
TRIM16L-216ENST00000641936 BAG1Q99933 345 aaPredicted RBP11.8□□□□□ -0.52
TRIM16L-216ENST00000641936 PA2G4Q9UQ80 394 aaKnown RBP11.8□□□□□ -0.52
TRIM16L-216ENST00000641936 A0A1B0GUA9 196 aa11.79□□□□□ -0.52
TRIM16L-216ENST00000641936 EFCAB8A8MWE9 144 aa11.79□□□□□ -0.52
TRIM16L-216ENST00000641936 HSPA4P34932 840 aa11.79□□□□□ -0.52
TRIM16L-216ENST00000641936 MAGEA8P43361 318 aa11.79□□□□□ -0.52
TRIM16L-216ENST00000641936 RPS6KA3P51812 740 aa11.79□□□□□ -0.52
TRIM16L-216ENST00000641936 NEK4P51957 841 aa11.79□□□□□ -0.52
TRIM16L-216ENST00000641936 SCRN1Q12765 414 aa11.79□□□□□ -0.52
TRIM16L-216ENST00000641936 SLC5A9Q2M3M2 681 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms