RNA–Protein interactions for RNA: ENST00000640011.1

PRKCH-228, Transcript of protein kinase C eta, humanhuman

TSL 5 BASIC

Gene PRKCH, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-228ENST00000640011 WDR43Q15061 677 aaKnown RBP eCLIP7.97□□□□□ -1.13
PRKCH-228ENST00000640011 IL27Q8NEV9 243 aa7.97□□□□□ -1.13
PRKCH-228ENST00000640011 HELBQ8NG08 1087 aaPredicted RBP7.97□□□□□ -1.13
PRKCH-228ENST00000640011 OPTNQ96CV9 577 aa7.97□□□□□ -1.13
PRKCH-228ENST00000640011 CLMNQ96JQ2 1002 aa7.97□□□□□ -1.13
PRKCH-228ENST00000640011 HTATIP2Q9BUP3 242 aa7.97□□□□□ -1.13
PRKCH-228ENST00000640011 GREM2Q9H772 168 aa7.97□□□□□ -1.13
PRKCH-228ENST00000640011 PHAXQ9H814 394 aaKnown RBP7.97□□□□□ -1.13
PRKCH-228ENST00000640011 CD209Q9NNX6 404 aa7.97□□□□□ -1.13
PRKCH-228ENST00000640011 MBIPQ9NS73 344 aa7.97□□□□□ -1.13
PRKCH-228ENST00000640011 IFT57Q9NWB7 429 aa7.97□□□□□ -1.13
PRKCH-228ENST00000640011 COL4A1P02462 1669 aa7.97□□□□□ -1.13
PRKCH-228ENST00000640011 USP2O75604 605 aaPredicted RBP7.96□□□□□ -1.14
PRKCH-228ENST00000640011 ITGA6P23229 1130 aa7.96□□□□□ -1.14
PRKCH-228ENST00000640011 HOXD10P28358 340 aa7.96□□□□□ -1.14
PRKCH-228ENST00000640011 TNNI2P48788 182 aa7.96□□□□□ -1.14
PRKCH-228ENST00000640011 TAF1CQ15572 869 aaPredicted RBP7.96□□□□□ -1.14
PRKCH-228ENST00000640011 CFAP100Q494V2 611 aa7.96□□□□□ -1.14
PRKCH-228ENST00000640011 KSR2Q6VAB6 950 aa7.96□□□□□ -1.14
PRKCH-228ENST00000640011 C15orf52Q6ZUT6 534 aaKnown RBP7.96□□□□□ -1.14
PRKCH-228ENST00000640011 ZNF804AQ7Z570 1209 aa7.96□□□□□ -1.14
PRKCH-228ENST00000640011 HOOK2Q96ED9 719 aa7.96□□□□□ -1.14
PRKCH-228ENST00000640011 CDCA7LQ96GN5 454 aa7.96□□□□□ -1.14
PRKCH-228ENST00000640011 PTPN18Q99952 460 aa7.96□□□□□ -1.14
PRKCH-228ENST00000640011 TMUB1Q9BVT8 246 aa7.96□□□□□ -1.14
PRKCH-228ENST00000640011 PLA2G12BQ9BX93 195 aa7.96□□□□□ -1.14
PRKCH-228ENST00000640011 FAM117AQ9C073 453 aa7.96□□□□□ -1.14
PRKCH-228ENST00000640011 VEZTQ9HBM0 779 aa7.96□□□□□ -1.14
PRKCH-228ENST00000640011 MAP3K2Q9Y2U5 619 aa7.96□□□□□ -1.14
PRKCH-228ENST00000640011 GTF3C3Q9Y5Q9 886 aa7.96□□□□□ -1.14
PRKCH-228ENST00000640011 CSADQ9Y600 493 aa7.96□□□□□ -1.14
PRKCH-228ENST00000640011 ADGRG1Q9Y653 693 aa7.96□□□□□ -1.14
PRKCH-228ENST00000640011 PTCH2Q9Y6C5 1203 aa7.96□□□□□ -1.14
PRKCH-228ENST00000640011 A0A1W2PPC1 479 aa7.95□□□□□ -1.14
PRKCH-228ENST00000640011 C3orf80F5H4A9 247 aa7.95□□□□□ -1.14
PRKCH-228ENST00000640011 H0YGN5 161 aa7.95□□□□□ -1.14
PRKCH-228ENST00000640011 TLR2O60603 784 aa7.95□□□□□ -1.14
PRKCH-228ENST00000640011 ZNF853P0CG23 659 aa7.95□□□□□ -1.14
PRKCH-228ENST00000640011 IL1R1P14778 569 aa7.95□□□□□ -1.14
PRKCH-228ENST00000640011 RBM5P52756 815 aaKnown RBP eCLIP7.95□□□□□ -1.14
PRKCH-228ENST00000640011 RASA3Q14644 834 aa7.95□□□□□ -1.14
PRKCH-228ENST00000640011 NBPF12Q5TAG4 269 aaPredicted RBP7.95□□□□□ -1.14
PRKCH-228ENST00000640011 TXNRD3Q86VQ6 643 aa7.95□□□□□ -1.14
PRKCH-228ENST00000640011 CCDC146Q8IYE0 955 aa7.95□□□□□ -1.14
PRKCH-228ENST00000640011 SLC17A8Q8NDX2 589 aa7.95□□□□□ -1.14
PRKCH-228ENST00000640011 NLRP7Q8WX94 980 aa7.95□□□□□ -1.14
PRKCH-228ENST00000640011 DPF3Q92784 378 aa7.95□□□□□ -1.14
PRKCH-228ENST00000640011 STK31Q9BXU1 1019 aa7.95□□□□□ -1.14
PRKCH-228ENST00000640011 MYH16Q9H6N6 1097 aa7.95□□□□□ -1.14
PRKCH-228ENST00000640011 SERPINA10Q9UK55 444 aa7.95□□□□□ -1.14
PRKCH-228ENST00000640011 FZD1Q9UP38 647 aa7.95□□□□□ -1.14
PRKCH-228ENST00000640011 NR2E3Q9Y5X4 410 aa7.95□□□□□ -1.14
PRKCH-228ENST00000640011 SSC5DA1L4H1 1573 aa7.94□□□□□ -1.14
PRKCH-228ENST00000640011 CCL15-CCL14A0A0B4J2E2 113 aa7.94□□□□□ -1.14
PRKCH-228ENST00000640011 CLRN2A0PK11 232 aa7.94□□□□□ -1.14
PRKCH-228ENST00000640011 ANKRD18BA2A2Z9 1011 aa7.94□□□□□ -1.14
PRKCH-228ENST00000640011 PI4KAP2A4QPH2 592 aa7.94□□□□□ -1.14
PRKCH-228ENST00000640011 WTIPA6NIX2 430 aaPredicted RBP7.94□□□□□ -1.14
PRKCH-228ENST00000640011 DLL1O00548 723 aa7.94□□□□□ -1.14
PRKCH-228ENST00000640011 ST18O60284 1047 aa7.94□□□□□ -1.14
PRKCH-228ENST00000640011 IGKV5-2P06315 115 aa7.94□□□□□ -1.14
PRKCH-228ENST00000640011 CETPP11597 493 aa7.94□□□□□ -1.14
PRKCH-228ENST00000640011 GJA5P36382 358 aa7.94□□□□□ -1.14
PRKCH-228ENST00000640011 LACTBP83111 547 aaPredicted RBP7.94□□□□□ -1.14
PRKCH-228ENST00000640011 CHRNDQ07001 517 aa7.94□□□□□ -1.14
PRKCH-228ENST00000640011 CCL15Q16663 113 aa7.94□□□□□ -1.14
PRKCH-228ENST00000640011 POTEEQ6S8J3 1075 aa7.94□□□□□ -1.14
PRKCH-228ENST00000640011 METTL3Q86U44 580 aaKnown RBP7.94□□□□□ -1.14
PRKCH-228ENST00000640011 PI4KAP1Q8N8J0 262 aa7.94□□□□□ -1.14
PRKCH-228ENST00000640011 JARID2Q92833 1246 aaPredicted RBP7.94□□□□□ -1.14
PRKCH-228ENST00000640011 PRMT6Q96LA8 375 aaPredicted RBP7.94□□□□□ -1.14
PRKCH-228ENST00000640011 ELP3Q9H9T3 547 aa7.94□□□□□ -1.14
PRKCH-228ENST00000640011 RBM27Q9P2N5 1060 aaKnown RBP7.94□□□□□ -1.14
PRKCH-228ENST00000640011 MYBBP1AQ9BQG0 1328 aaKnown RBP7.94□□□□□ -1.14
PRKCH-228ENST00000640011 LAMB1P07942 1786 aa7.93□□□□□ -1.14
PRKCH-228ENST00000640011 NEURL1BA8MQ27 555 aa7.93□□□□□ -1.14
PRKCH-228ENST00000640011 F8W031 263 aaPredicted RBP7.93□□□□□ -1.14
PRKCH-228ENST00000640011 H7C1W4 665 aa7.93□□□□□ -1.14
PRKCH-228ENST00000640011 CSF1RP07333 972 aa7.93□□□□□ -1.14
PRKCH-228ENST00000640011 MS4A1P11836 297 aa7.93□□□□□ -1.14
PRKCH-228ENST00000640011 PTPREP23469 700 aa7.93□□□□□ -1.14
PRKCH-228ENST00000640011 MDM2Q00987 491 aaPredicted RBP7.93□□□□□ -1.14
PRKCH-228ENST00000640011 IFIT5Q13325 482 aaKnown RBP7.93□□□□□ -1.14
PRKCH-228ENST00000640011 SNAPC2Q13487 334 aa7.93□□□□□ -1.14
PRKCH-228ENST00000640011 UBE3BQ7Z3V4 1068 aa7.93□□□□□ -1.14
PRKCH-228ENST00000640011 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.93□□□□□ -1.14
PRKCH-228ENST00000640011 PXYLP1Q8TE99 480 aa7.93□□□□□ -1.14
PRKCH-228ENST00000640011 BRI3BPQ8WY22 251 aa7.93□□□□□ -1.14
PRKCH-228ENST00000640011 SPDYE5A6NIY4 337 aa7.92□□□□□ -1.14
PRKCH-228ENST00000640011 PPP1R3GB7ZBB8 358 aa7.92□□□□□ -1.14
PRKCH-228ENST00000640011 ELL2O00472 640 aaPredicted RBP7.92□□□□□ -1.14
PRKCH-228ENST00000640011 KLRK1P26718 216 aa7.92□□□□□ -1.14
PRKCH-228ENST00000640011 GJA8P48165 433 aa7.92□□□□□ -1.14
PRKCH-228ENST00000640011 UBXN2AP68543 259 aa7.92□□□□□ -1.14
PRKCH-228ENST00000640011 VGLL4Q14135 290 aa7.92□□□□□ -1.14
PRKCH-228ENST00000640011 GCKRQ14397 625 aa7.92□□□□□ -1.14
PRKCH-228ENST00000640011 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.92□□□□□ -1.14
PRKCH-228ENST00000640011 ERO1BQ86YB8 467 aa7.92□□□□□ -1.14
PRKCH-228ENST00000640011 FAM43AQ8N2R8 423 aa7.92□□□□□ -1.14
PRKCH-228ENST00000640011 CERS5Q8N5B7 392 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms