RNA–Protein interactions for RNA: ENST00000639453.1

CCDC7-214, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-214ENST00000639453 PI4K2BQ8TCG2 481 aa7.63□□□□□ -1.19
CCDC7-214ENST00000639453 GSX1Q9H4S2 264 aaPredicted RBP7.63□□□□□ -1.19
CCDC7-214ENST00000639453 RC3H2Q9HBD1 1191 aaKnown RBP7.63□□□□□ -1.19
CCDC7-214ENST00000639453 VAV3Q9UKW4 847 aa7.63□□□□□ -1.19
CCDC7-214ENST00000639453 BRPF3Q9ULD4 1205 aa7.63□□□□□ -1.19
CCDC7-214ENST00000639453 SEZ6L2Q6UXD5 910 aa7.62□□□□□ -1.19
CCDC7-214ENST00000639453 TMEM40Q8WWA1 233 aa7.62□□□□□ -1.19
CCDC7-214ENST00000639453 TCF12Q99081 682 aa7.62□□□□□ -1.19
CCDC7-214ENST00000639453 CCDC87Q9NVE4 849 aa7.62□□□□□ -1.19
CCDC7-214ENST00000639453 PPP1R15AO75807 674 aaPredicted RBP7.61□□□□□ -1.19
CCDC7-214ENST00000639453 CTSBP07858 339 aa7.61□□□□□ -1.19
CCDC7-214ENST00000639453 FAM87AP0C7U9 286 aa7.61□□□□□ -1.19
CCDC7-214ENST00000639453 FUT4P22083 530 aa7.61□□□□□ -1.19
CCDC7-214ENST00000639453 KIAA0319Q5VV43 1072 aa7.61□□□□□ -1.19
CCDC7-214ENST00000639453 ZNF574Q6ZN55 896 aaPredicted RBP7.61□□□□□ -1.19
CCDC7-214ENST00000639453 FAM168AQ92567 244 aa7.61□□□□□ -1.19
CCDC7-214ENST00000639453 WDR18Q9BV38 432 aa7.61□□□□□ -1.19
CCDC7-214ENST00000639453 ZNF576Q9H609 170 aa7.61□□□□□ -1.19
CCDC7-214ENST00000639453 DYNC1LI2O43237 492 aaPredicted RBP7.6□□□□□ -1.19
CCDC7-214ENST00000639453 PRKCQQ04759 706 aa7.6□□□□□ -1.19
CCDC7-214ENST00000639453 PTPN12Q05209 780 aaKnown RBP7.6□□□□□ -1.19
CCDC7-214ENST00000639453 PDE3BQ13370 1112 aa7.6□□□□□ -1.19
CCDC7-214ENST00000639453 IFI16Q16666 785 aaKnown RBP7.6□□□□□ -1.19
CCDC7-214ENST00000639453 SPRED2Q7Z698 418 aa7.6□□□□□ -1.19
CCDC7-214ENST00000639453 TRIM56Q9BRZ2 755 aaKnown RBP7.6□□□□□ -1.19
CCDC7-214ENST00000639453 ITPKAP23677 461 aa7.59□□□□□ -1.19
CCDC7-214ENST00000639453 ID3Q02535 119 aa7.59□□□□□ -1.19
CCDC7-214ENST00000639453 BNIP3Q12983 259 aa7.59□□□□□ -1.19
CCDC7-214ENST00000639453 SMYD4Q8IYR2 804 aaPredicted RBP7.59□□□□□ -1.19
CCDC7-214ENST00000639453 PLD6Q8N2A8 252 aaKnown RBP7.59□□□□□ -1.19
CCDC7-214ENST00000639453 HRASLS5Q96KN8 279 aa7.59□□□□□ -1.19
CCDC7-214ENST00000639453 MKNK2Q9HBH9 465 aa7.59□□□□□ -1.19
CCDC7-214ENST00000639453 SSU72Q9NP77 194 aaKnown RBP7.59□□□□□ -1.19
CCDC7-214ENST00000639453 TMEM265A0A087WTH1 108 aa7.58□□□□□ -1.2
CCDC7-214ENST00000639453 NDUFB5O43674 189 aa7.58□□□□□ -1.2
CCDC7-214ENST00000639453 RNGTTO60942 597 aaKnown RBP7.58□□□□□ -1.2
CCDC7-214ENST00000639453 CPNE3O75131 537 aaKnown RBP7.58□□□□□ -1.2
CCDC7-214ENST00000639453 ECEL1O95672 775 aa7.58□□□□□ -1.2
CCDC7-214ENST00000639453 CD8BP10966 210 aa7.58□□□□□ -1.2
CCDC7-214ENST00000639453 CDK5R2Q13319 367 aa7.58□□□□□ -1.2
CCDC7-214ENST00000639453 ZNF124Q15973 351 aa7.58□□□□□ -1.2
CCDC7-214ENST00000639453 RPS26P11Q5JNZ5 115 aaPredicted RBP7.58□□□□□ -1.2
CCDC7-214ENST00000639453 ANGEL2Q5VTE6 544 aaKnown RBP7.58□□□□□ -1.2
CCDC7-214ENST00000639453 B4GALNT3Q6L9W6 998 aa7.58□□□□□ -1.2
CCDC7-214ENST00000639453 ANO2Q9NQ90 1003 aa7.58□□□□□ -1.2
CCDC7-214ENST00000639453 PPP4R2Q9NY27 417 aa7.58□□□□□ -1.2
CCDC7-214ENST00000639453 FAM53CQ9NYF3 392 aa7.58□□□□□ -1.2
CCDC7-214ENST00000639453 PPP1R9AQ9ULJ8 1098 aa7.58□□□□□ -1.2
CCDC7-214ENST00000639453 TRAK1Q9UPV9 953 aa7.58□□□□□ -1.2
CCDC7-214ENST00000639453 PPP2R3AQ06190 1150 aa7.57□□□□□ -1.2
CCDC7-214ENST00000639453 AOC3Q16853 763 aa7.57□□□□□ -1.2
CCDC7-214ENST00000639453 CRIM1Q9NZV1 1036 aa7.57□□□□□ -1.2
CCDC7-214ENST00000639453 PCOLCE2Q9UKZ9 415 aa7.57□□□□□ -1.2
CCDC7-214ENST00000639453 TMEM88BA6NKF7 163 aa7.56□□□□□ -1.2
CCDC7-214ENST00000639453 GADD45BO75293 160 aaPredicted RBP7.56□□□□□ -1.2
CCDC7-214ENST00000639453 ZNF211Q13398 564 aaPredicted RBP7.56□□□□□ -1.2
CCDC7-214ENST00000639453 FAM181AQ8N9Y4 354 aa7.56□□□□□ -1.2
CCDC7-214ENST00000639453 GLIS3Q8NEA6 775 aa7.56□□□□□ -1.2
CCDC7-214ENST00000639453 TMPRSS2O15393 492 aa7.55□□□□□ -1.2
CCDC7-214ENST00000639453 RNASE1P07998 156 aaKnown RBP7.55□□□□□ -1.2
CCDC7-214ENST00000639453 LIG1P18858 919 aa7.55□□□□□ -1.2
CCDC7-214ENST00000639453 FBLN7Q53RD9 439 aa7.55□□□□□ -1.2
CCDC7-214ENST00000639453 GLYCTKQ8IVS8 523 aa7.55□□□□□ -1.2
CCDC7-214ENST00000639453 FANCD2OSQ96PS1 177 aa7.55□□□□□ -1.2
CCDC7-214ENST00000639453 KRT82Q9NSB4 513 aa7.55□□□□□ -1.2
CCDC7-214ENST00000639453 MBNL3Q9NUK0 354 aaKnown RBP7.55□□□□□ -1.2
CCDC7-214ENST00000639453 EGFL7Q9UHF1 273 aa7.55□□□□□ -1.2
CCDC7-214ENST00000639453 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.55□□□□□ -1.2
CCDC7-214ENST00000639453 CARMIL2Q6F5E8 1435 aa7.54□□□□□ -1.2
CCDC7-214ENST00000639453 SLC23A3Q6PIS1 610 aa7.54□□□□□ -1.2
CCDC7-214ENST00000639453 TMC1Q8TDI8 760 aa7.54□□□□□ -1.2
CCDC7-214ENST00000639453 FAM84AQ96KN4 292 aa7.54□□□□□ -1.2
CCDC7-214ENST00000639453 ZC3H12CQ9C0D7 883 aaKnown RBP7.54□□□□□ -1.2
CCDC7-214ENST00000639453 NPHS2Q9NP85 383 aa7.54□□□□□ -1.2
CCDC7-214ENST00000639453 LRRC10BA6NIK2 292 aa7.53□□□□□ -1.2
CCDC7-214ENST00000639453 CEACAM5P06731 702 aa7.53□□□□□ -1.2
CCDC7-214ENST00000639453 KRTAP19-4Q3LI73 84 aa7.53□□□□□ -1.2
CCDC7-214ENST00000639453 BHLHE22Q8NFJ8 381 aaPredicted RBP7.53□□□□□ -1.2
CCDC7-214ENST00000639453 CITED4Q96RK1 184 aa7.53□□□□□ -1.2
CCDC7-214ENST00000639453 CCDC86Q9H6F5 360 aaKnown RBP7.53□□□□□ -1.2
CCDC7-214ENST00000639453 SNX11Q9Y5W9 270 aa7.53□□□□□ -1.2
CCDC7-214ENST00000639453 TMEM238LA0A1B0GVL6 79 aa7.52□□□□□ -1.21
CCDC7-214ENST00000639453 GSTP1P09211 210 aaKnown RBP7.52□□□□□ -1.21
CCDC7-214ENST00000639453 TTLL4Q14679 1199 aa7.52□□□□□ -1.21
CCDC7-214ENST00000639453 USPL1Q5W0Q7 1092 aa7.52□□□□□ -1.21
CCDC7-214ENST00000639453 LRRN4CLQ8ND94 238 aa7.52□□□□□ -1.21
CCDC7-214ENST00000639453 ASB11Q8WXH4 323 aa7.52□□□□□ -1.21
CCDC7-214ENST00000639453 DUSP23Q9BVJ7 150 aa7.52□□□□□ -1.21
CCDC7-214ENST00000639453 DNAJC25Q9H1X3 360 aa7.52□□□□□ -1.21
CCDC7-214ENST00000639453 GTF2IRD1Q9UHL9 959 aa7.52□□□□□ -1.21
CCDC7-214ENST00000639453 ICMTO60725 284 aa7.51□□□□□ -1.21
CCDC7-214ENST00000639453 HCLS1P14317 486 aaPredicted RBP7.51□□□□□ -1.21
CCDC7-214ENST00000639453 ZNF157P51786 506 aaPredicted RBP7.51□□□□□ -1.21
CCDC7-214ENST00000639453 KCNMB1Q16558 191 aa7.51□□□□□ -1.21
CCDC7-214ENST00000639453 KIF4BQ2VIQ3 1234 aa7.51□□□□□ -1.21
CCDC7-214ENST00000639453 PRPF40BQ6NWY9 871 aaKnown RBP7.51□□□□□ -1.21
CCDC7-214ENST00000639453 DTHD1Q6ZMT9 781 aa7.51□□□□□ -1.21
CCDC7-214ENST00000639453 ZSWIM9Q86XI8 627 aa7.51□□□□□ -1.21
CCDC7-214ENST00000639453 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.51□□□□□ -1.21
CCDC7-214ENST00000639453 KCNB2Q92953 911 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms