RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 CCDC74AQ96AQ1 378 aa5.79□□□□□ -1.48
ATM-228ENST00000639240 ALKBH8Q96BT7 664 aaKnown RBP5.79□□□□□ -1.48
ATM-228ENST00000639240 TBC1D32Q96NH3 1257 aa5.79□□□□□ -1.48
ATM-228ENST00000639240 C1GALT1Q9NS00 363 aa5.79□□□□□ -1.48
ATM-228ENST00000639240 CCDC39Q9UFE4 941 aa5.79□□□□□ -1.48
ATM-228ENST00000639240 PPP1R9AQ9ULJ8 1098 aa5.79□□□□□ -1.48
ATM-228ENST00000639240 LEMD3Q9Y2U8 911 aa5.79□□□□□ -1.48
ATM-228ENST00000639240 ZNF157P51786 506 aaPredicted RBP5.78□□□□□ -1.48
ATM-228ENST00000639240 PLCB3Q01970 1234 aa5.78□□□□□ -1.48
ATM-228ENST00000639240 PAOXQ6QHF9 649 aa5.78□□□□□ -1.48
ATM-228ENST00000639240 SND1Q7KZF4 910 aaKnown RBP eCLIP5.78□□□□□ -1.48
ATM-228ENST00000639240 EPS8L3Q8TE67 593 aaKnown RBP5.78□□□□□ -1.48
ATM-228ENST00000639240 CSRNP1Q96S65 589 aa5.78□□□□□ -1.48
ATM-228ENST00000639240 WDR18Q9BV38 432 aa5.78□□□□□ -1.48
ATM-228ENST00000639240 OSBPL1AQ9BXW6 950 aa5.78□□□□□ -1.48
ATM-228ENST00000639240 DNAJC25Q9H1X3 360 aa5.78□□□□□ -1.48
ATM-228ENST00000639240 EHD4Q9H223 541 aa5.78□□□□□ -1.48
ATM-228ENST00000639240 ATG3Q9NT62 314 aa5.78□□□□□ -1.48
ATM-228ENST00000639240 TREHO43280 583 aa5.77□□□□□ -1.49
ATM-228ENST00000639240 AOC2O75106 756 aa5.77□□□□□ -1.49
ATM-228ENST00000639240 PRNPP04156 253 aa5.77□□□□□ -1.49
ATM-228ENST00000639240 CYP11A1P05108 521 aa5.77□□□□□ -1.49
ATM-228ENST00000639240 RAB6AP20340 208 aa5.77□□□□□ -1.49
ATM-228ENST00000639240 GRM2Q14416 872 aa5.77□□□□□ -1.49
ATM-228ENST00000639240 DSC3Q14574 896 aa5.77□□□□□ -1.49
ATM-228ENST00000639240 PI16Q6UXB8 463 aa5.77□□□□□ -1.49
ATM-228ENST00000639240 ZNF765Q7L2R6 523 aa5.77□□□□□ -1.49
ATM-228ENST00000639240 DYMQ7RTS9 669 aa5.77□□□□□ -1.49
ATM-228ENST00000639240 WFDC3Q8IUB2 231 aa5.77□□□□□ -1.49
ATM-228ENST00000639240 ASB16Q96NS5 453 aa5.77□□□□□ -1.49
ATM-228ENST00000639240 GZF1Q9H116 711 aaPredicted RBP5.77□□□□□ -1.49
ATM-228ENST00000639240 TMEM238LA0A1B0GVL6 79 aa5.76□□□□□ -1.49
ATM-228ENST00000639240 ZNF862O60290 1169 aa5.76□□□□□ -1.49
ATM-228ENST00000639240 LIG1P18858 919 aa5.76□□□□□ -1.49
ATM-228ENST00000639240 MAPK8P45983 427 aa5.76□□□□□ -1.49
ATM-228ENST00000639240 PRPF40BQ6NWY9 871 aaKnown RBP5.76□□□□□ -1.49
ATM-228ENST00000639240 CCDC86Q9H6F5 360 aaKnown RBP5.76□□□□□ -1.49
ATM-228ENST00000639240 LGR6Q9HBX8 967 aa5.76□□□□□ -1.49
ATM-228ENST00000639240 ZC3H7BQ9UGR2 993 aaKnown RBP5.76□□□□□ -1.49
ATM-228ENST00000639240 PNMA6FA0A0J9YX94 578 aa5.75□□□□□ -1.49
ATM-228ENST00000639240 TMPRSS2O15393 492 aa5.75□□□□□ -1.49
ATM-228ENST00000639240 CYP26A1O43174 497 aa5.75□□□□□ -1.49
ATM-228ENST00000639240 GADD45BO75293 160 aaPredicted RBP5.75□□□□□ -1.49
ATM-228ENST00000639240 ASPAP45381 313 aa5.75□□□□□ -1.49
ATM-228ENST00000639240 PTPN12Q05209 780 aaKnown RBP5.75□□□□□ -1.49
ATM-228ENST00000639240 FZD5Q13467 585 aa5.75□□□□□ -1.49
ATM-228ENST00000639240 CBLL1Q75N03 491 aa5.75□□□□□ -1.49
ATM-228ENST00000639240 STK35Q8TDR2 534 aa5.75□□□□□ -1.49
ATM-228ENST00000639240 CORO1BQ9BR76 489 aa5.75□□□□□ -1.49
ATM-228ENST00000639240 ZC3H12CQ9C0D7 883 aaKnown RBP5.75□□□□□ -1.49
ATM-228ENST00000639240 AP4E1Q9UPM8 1137 aa5.75□□□□□ -1.49
ATM-228ENST00000639240 PCDHGC5Q9Y5F6 944 aa5.75□□□□□ -1.49
ATM-228ENST00000639240 U3KQE9 123 aa5.75□□□□□ -1.49
ATM-228ENST00000639240 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.74□□□□□ -1.49
ATM-228ENST00000639240 PAX4O43316 350 aa5.74□□□□□ -1.49
ATM-228ENST00000639240 CPSF6Q16630 551 aaKnown RBP eCLIP5.74□□□□□ -1.49
ATM-228ENST00000639240 RAD18Q9NS91 495 aa5.74□□□□□ -1.49
ATM-228ENST00000639240 FMR1Q06787 632 aaKnown RBP eCLIP5.73□□□□□ -1.49
ATM-228ENST00000639240 ENOX2Q16206 610 aaKnown RBP5.73□□□□□ -1.49
ATM-228ENST00000639240 PDZD3Q86UT5 571 aa5.73□□□□□ -1.49
ATM-228ENST00000639240 GIMAP7Q8NHV1 300 aa5.73□□□□□ -1.49
ATM-228ENST00000639240 METTL22Q9BUU2 404 aaPredicted RBP5.73□□□□□ -1.49
ATM-228ENST00000639240 KRTAP9-8Q9BYQ0 159 aa5.73□□□□□ -1.49
ATM-228ENST00000639240 PAK6Q9NQU5 681 aaPredicted RBP5.73□□□□□ -1.49
ATM-228ENST00000639240 NLRP2Q9NX02 1062 aa5.73□□□□□ -1.49
ATM-228ENST00000639240 CRIM1Q9NZV1 1036 aa5.73□□□□□ -1.49
ATM-228ENST00000639240 DAGLAQ9Y4D2 1042 aa5.73□□□□□ -1.49
ATM-228ENST00000639240 MAP7Q14244 749 aa5.72□□□□□ -1.49
ATM-228ENST00000639240 PDE3AQ14432 1141 aa5.72□□□□□ -1.49
ATM-228ENST00000639240 RPS26P11Q5JNZ5 115 aaPredicted RBP5.72□□□□□ -1.49
ATM-228ENST00000639240 OGFOD3Q6PK18 319 aa5.72□□□□□ -1.49
ATM-228ENST00000639240 FANCD2OSQ96PS1 177 aa5.72□□□□□ -1.49
ATM-228ENST00000639240 YIPF2Q9BWQ6 316 aa5.72□□□□□ -1.49
ATM-228ENST00000639240 LRRC4CQ9HCJ2 640 aa5.72□□□□□ -1.49
ATM-228ENST00000639240 DISC1Q9NRI5 854 aa5.72□□□□□ -1.49
ATM-228ENST00000639240 WWC3Q9ULE0 1092 aa5.72□□□□□ -1.49
ATM-228ENST00000639240 RNF114Q9Y508 228 aa5.72□□□□□ -1.49
ATM-228ENST00000639240 SYNGAP1Q96PV0 1343 aa5.72□□□□□ -1.49
ATM-228ENST00000639240 ZBTB7CA1YPR0 619 aa5.71□□□□□ -1.5
ATM-228ENST00000639240 ANKRD33BA6NCL7 494 aa5.71□□□□□ -1.5
ATM-228ENST00000639240 EIF4EBP3O60516 100 aaPredicted RBP5.71□□□□□ -1.5
ATM-228ENST00000639240 P4HBP07237 508 aaKnown RBP5.71□□□□□ -1.5
ATM-228ENST00000639240 TXKP42681 527 aa5.71□□□□□ -1.5
ATM-228ENST00000639240 CDK5R2Q13319 367 aa5.71□□□□□ -1.5
ATM-228ENST00000639240 AP3B2Q13367 1082 aa5.71□□□□□ -1.5
ATM-228ENST00000639240 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.71□□□□□ -1.5
ATM-228ENST00000639240 MPRIPQ6WCQ1 1025 aa5.71□□□□□ -1.5
ATM-228ENST00000639240 ZNF574Q6ZN55 896 aaPredicted RBP5.71□□□□□ -1.5
ATM-228ENST00000639240 SPRED2Q7Z698 418 aa5.71□□□□□ -1.5
ATM-228ENST00000639240 VSIG10LQ86VR7 867 aa5.71□□□□□ -1.5
ATM-228ENST00000639240 SETDB2Q96T68 719 aa5.71□□□□□ -1.5
ATM-228ENST00000639240 BSDC1Q9NW68 430 aaPredicted RBP5.71□□□□□ -1.5
ATM-228ENST00000639240 GSTP1P09211 210 aaKnown RBP5.7□□□□□ -1.5
ATM-228ENST00000639240 FCGRTP55899 365 aa5.7□□□□□ -1.5
ATM-228ENST00000639240 ATP2B2Q01814 1243 aa5.7□□□□□ -1.5
ATM-228ENST00000639240 CCDC27Q2M243 656 aa5.7□□□□□ -1.5
ATM-228ENST00000639240 KIF4BQ2VIQ3 1234 aa5.7□□□□□ -1.5
ATM-228ENST00000639240 BCO2Q9BYV7 579 aa5.7□□□□□ -1.5
ATM-228ENST00000639240 PPP4R2Q9NY27 417 aa5.7□□□□□ -1.5
ATM-228ENST00000639240 ANGEL1Q9UNK9 670 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms