RNA–Protein interactions for RNA: ENST00000639169.1

GCSH-208, Transcript of glycine cleavage system protein H, humanhuman

TSL 2 BASIC

Gene GCSH, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSH-208ENST00000639169 PDLIM2Q96JY6 352 aa21.51■■□□□ 1.03
GCSH-208ENST00000639169 GOLGB1Q14789 3259 aaKnown RBP21.51■■□□□ 1.03
GCSH-208ENST00000639169 CPLX1O14810 134 aa21.51■■□□□ 1.03
GCSH-208ENST00000639169 TOMM22Q9NS69 142 aa21.51■■□□□ 1.03
GCSH-208ENST00000639169 SCN7AQ01118 1682 aa21.51■■□□□ 1.03
GCSH-208ENST00000639169 POLR3DP05423 398 aaPredicted RBP21.5■■□□□ 1.03
GCSH-208ENST00000639169 RFC4P35249 363 aa21.5■■□□□ 1.03
GCSH-208ENST00000639169 PHKBQ93100 1093 aa21.5■■□□□ 1.03
GCSH-208ENST00000639169 NPHP1O15259 732 aa21.5■■□□□ 1.03
GCSH-208ENST00000639169 CAVIN4Q5BKX8 364 aa21.5■■□□□ 1.03
GCSH-208ENST00000639169 APOA5Q6Q788 366 aa21.5■■□□□ 1.03
GCSH-208ENST00000639169 MPNDQ8N594 471 aa21.5■■□□□ 1.03
GCSH-208ENST00000639169 NYXQ9GZU5 481 aa21.5■■□□□ 1.03
GCSH-208ENST00000639169 LY9Q9HBG7 655 aa21.5■■□□□ 1.03
GCSH-208ENST00000639169 CYP2D7A0A087X1C5 515 aa21.49■■□□□ 1.03
GCSH-208ENST00000639169 EVX2Q03828 476 aa21.49■■□□□ 1.03
GCSH-208ENST00000639169 BICD2Q8TD16 824 aa21.49■■□□□ 1.03
GCSH-208ENST00000639169 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.49■■□□□ 1.03
GCSH-208ENST00000639169 TMEM67Q5HYA8 995 aa21.49■■□□□ 1.03
GCSH-208ENST00000639169 AKNAD1Q5T1N1 836 aa21.49■■□□□ 1.03
GCSH-208ENST00000639169 TRAPPC3LQ5T215 181 aa21.49■■□□□ 1.03
GCSH-208ENST00000639169 NHSQ6T4R5 1651 aa21.48■■□□□ 1.03
GCSH-208ENST00000639169 MINDY4BA8MYZ0 360 aa21.48■■□□□ 1.03
GCSH-208ENST00000639169 NFIXQ14938 502 aa21.48■■□□□ 1.03
GCSH-208ENST00000639169 NFXL1Q6ZNB6 911 aa21.48■■□□□ 1.03
GCSH-208ENST00000639169 C8orf76Q96K31 380 aa21.48■■□□□ 1.03
GCSH-208ENST00000639169 GNL3LQ9NVN8 582 aaKnown RBP21.48■■□□□ 1.03
GCSH-208ENST00000639169 PNPLA7Q6ZV29 1317 aa21.48■■□□□ 1.03
GCSH-208ENST00000639169 WDR19Q8NEZ3 1342 aa21.48■■□□□ 1.03
GCSH-208ENST00000639169 A0A1B0GUL6 1792 aa21.48■■□□□ 1.03
GCSH-208ENST00000639169 METAP2P50579 478 aaKnown RBP eCLIP21.48■■□□□ 1.03
GCSH-208ENST00000639169 MFSD6Q6ZSS7 791 aa21.48■■□□□ 1.03
GCSH-208ENST00000639169 KIF28PB7ZC32 967 aa21.47■■□□□ 1.03
GCSH-208ENST00000639169 IFIT3O14879 490 aaKnown RBP21.47■■□□□ 1.03
GCSH-208ENST00000639169 LETM1O95202 739 aaPredicted RBP21.47■■□□□ 1.03
GCSH-208ENST00000639169 FBXO33Q7Z6M2 555 aa21.47■■□□□ 1.03
GCSH-208ENST00000639169 NUP62CLQ9H1M0 184 aa21.47■■□□□ 1.03
GCSH-208ENST00000639169 FAM217BQ9NTX9 383 aaPredicted RBP21.47■■□□□ 1.03
GCSH-208ENST00000639169 CFAP45Q9UL16 551 aa21.47■■□□□ 1.03
GCSH-208ENST00000639169 KIF3AQ9Y496 699 aa21.47■■□□□ 1.03
GCSH-208ENST00000639169 MAGEB6P1A0A0J9YX57 407 aa21.47■■□□□ 1.03
GCSH-208ENST00000639169 RIOK1Q9BRS2 568 aaKnown RBP21.47■■□□□ 1.03
GCSH-208ENST00000639169 USP25Q9UHP3 1055 aa21.47■■□□□ 1.03
GCSH-208ENST00000639169 DHX16O60231 1041 aaKnown RBP21.46■■□□□ 1.03
GCSH-208ENST00000639169 CHAF1AQ13111 956 aaPredicted RBP21.46■■□□□ 1.03
GCSH-208ENST00000639169 FBXO18Q8NFZ0 1043 aa21.46■■□□□ 1.03
GCSH-208ENST00000639169 ZMYM6O95789 1325 aa21.46■■□□□ 1.03
GCSH-208ENST00000639169 GPR101Q96P66 508 aaPredicted RBP21.46■■□□□ 1.03
GCSH-208ENST00000639169 GOLPH3LQ9H4A5 285 aa21.46■■□□□ 1.03
GCSH-208ENST00000639169 RCOR1Q9UKL0 485 aa21.46■■□□□ 1.03
GCSH-208ENST00000639169 CMTR1Q8N1G2 835 aaKnown RBP21.45■■□□□ 1.02
GCSH-208ENST00000639169 NACAP1Q9BZK3 213 aa21.45■■□□□ 1.02
GCSH-208ENST00000639169 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.45■■□□□ 1.02
GCSH-208ENST00000639169 RANBP6O60518 1105 aaKnown RBP21.45■■□□□ 1.02
GCSH-208ENST00000639169 TMEM87BQ96K49 555 aa21.45■■□□□ 1.02
GCSH-208ENST00000639169 TNMDQ9H2S6 317 aa21.45■■□□□ 1.02
GCSH-208ENST00000639169 CLIC4Q9Y696 253 aa21.45■■□□□ 1.02
GCSH-208ENST00000639169 TAF1LQ8IZX4 1826 aa21.44■■□□□ 1.02
GCSH-208ENST00000639169 ZBTB43O43298 467 aa21.44■■□□□ 1.02
GCSH-208ENST00000639169 PRDX5P30044 214 aa21.44■■□□□ 1.02
GCSH-208ENST00000639169 PPARAQ07869 468 aa21.44■■□□□ 1.02
GCSH-208ENST00000639169 AP5Z1O43299 807 aa21.44■■□□□ 1.02
GCSH-208ENST00000639169 ONECUT3O60422 494 aaPredicted RBP21.44■■□□□ 1.02
GCSH-208ENST00000639169 GNAT2P19087 354 aa21.44■■□□□ 1.02
GCSH-208ENST00000639169 HIBADHP31937 336 aaKnown RBP21.44■■□□□ 1.02
GCSH-208ENST00000639169 NTRK3Q16288 839 aa21.44■■□□□ 1.02
GCSH-208ENST00000639169 MAP3K11Q16584 847 aa21.44■■□□□ 1.02
GCSH-208ENST00000639169 CCDC82Q8N4S0 544 aa21.44■■□□□ 1.02
GCSH-208ENST00000639169 CERKQ8TCT0 537 aa21.44■■□□□ 1.02
GCSH-208ENST00000639169 CACNA1SQ13698 1873 aa21.43■■□□□ 1.02
GCSH-208ENST00000639169 C4AP0C0L4 1744 aa21.43■■□□□ 1.02
GCSH-208ENST00000639169 C4BP0C0L5 1744 aa21.43■■□□□ 1.02
GCSH-208ENST00000639169 STAG1Q8WVM7 1258 aa21.43■■□□□ 1.02
GCSH-208ENST00000639169 TNRC6CQ9HCJ0 1690 aaKnown RBP21.43■■□□□ 1.02
GCSH-208ENST00000639169 SBF2Q86WG5 1849 aa21.43■■□□□ 1.02
GCSH-208ENST00000639169 PRDM1O75626 825 aa21.43■■□□□ 1.02
GCSH-208ENST00000639169 MECOMQ03112 1051 aa21.43■■□□□ 1.02
GCSH-208ENST00000639169 CCAR1Q8IX12 1150 aaKnown RBP21.43■■□□□ 1.02
GCSH-208ENST00000639169 GOLGA8AA7E2F4 631 aa21.42■■□□□ 1.02
GCSH-208ENST00000639169 SGMS1Q86VZ5 419 aa21.42■■□□□ 1.02
GCSH-208ENST00000639169 NSUN4Q96CB9 384 aaKnown RBP21.42■■□□□ 1.02
GCSH-208ENST00000639169 ALG1Q9BT22 464 aa21.42■■□□□ 1.02
GCSH-208ENST00000639169 QTRT2Q9H974 415 aaKnown RBP21.42■■□□□ 1.02
GCSH-208ENST00000639169 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.42■■□□□ 1.02
GCSH-208ENST00000639169 SLC12A7Q9Y666 1083 aa21.42■■□□□ 1.02
GCSH-208ENST00000639169 COL24A1Q17RW2 1714 aa21.42■■□□□ 1.02
GCSH-208ENST00000639169 RGL2O15211 777 aa21.42■■□□□ 1.02
GCSH-208ENST00000639169 ME1P48163 572 aa21.42■■□□□ 1.02
GCSH-208ENST00000639169 PLCB2Q00722 1185 aa21.42■■□□□ 1.02
GCSH-208ENST00000639169 CLSTN2Q9H4D0 955 aa21.42■■□□□ 1.02
GCSH-208ENST00000639169 MRVI1Q9Y6F6 885 aa21.42■■□□□ 1.02
GCSH-208ENST00000639169 MYH15Q9Y2K3 1946 aa21.41■■□□□ 1.02
GCSH-208ENST00000639169 A0A087WWV3 80 aa21.41■■□□□ 1.02
GCSH-208ENST00000639169 GUCY1A2P33402 732 aa21.41■■□□□ 1.02
GCSH-208ENST00000639169 CLCN1P35523 988 aa21.41■■□□□ 1.02
GCSH-208ENST00000639169 SLC4A8Q2Y0W8 1093 aa21.41■■□□□ 1.02
GCSH-208ENST00000639169 KRT23Q9C075 422 aa21.41■■□□□ 1.02
GCSH-208ENST00000639169 BCL11BQ9C0K0 894 aaPredicted RBP21.41■■□□□ 1.02
GCSH-208ENST00000639169 AATFQ9NY61 560 aaKnown RBP eCLIP21.41■■□□□ 1.02
GCSH-208ENST00000639169 TRPC5Q9UL62 973 aaPredicted RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms