RNA–Protein interactions for RNA: ENST00000639000.1

SPIN3-217, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,055 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-217ENST00000639000 XPO4Q9C0E2 1151 aaKnown RBP18.8■□□□□ 0.6
SPIN3-217ENST00000639000 ZNF532Q9HCE3 1301 aa18.8■□□□□ 0.6
SPIN3-217ENST00000639000 LTBP4Q8N2S1 1624 aa18.8■□□□□ 0.6
SPIN3-217ENST00000639000 PDE6AP16499 860 aa18.8■□□□□ 0.6
SPIN3-217ENST00000639000 PTPN14Q15678 1187 aa18.8■□□□□ 0.6
SPIN3-217ENST00000639000 ALX1Q15699 326 aa18.8■□□□□ 0.6
SPIN3-217ENST00000639000 KRT40Q6A162 431 aa18.8■□□□□ 0.6
SPIN3-217ENST00000639000 MAP3K14Q99558 947 aa18.8■□□□□ 0.6
SPIN3-217ENST00000639000 CNNM1Q9NRU3 951 aa18.8■□□□□ 0.6
SPIN3-217ENST00000639000 FAM217BQ9NTX9 383 aaPredicted RBP18.8■□□□□ 0.6
SPIN3-217ENST00000639000 TUBE1Q9UJT0 475 aa18.8■□□□□ 0.6
SPIN3-217ENST00000639000 IRS4O14654 1257 aaPredicted RBP18.79■□□□□ 0.6
SPIN3-217ENST00000639000 PPP6R2O75170 966 aa18.79■□□□□ 0.6
SPIN3-217ENST00000639000 CDKL5O76039 1030 aa18.79■□□□□ 0.6
SPIN3-217ENST00000639000 MARCKSP29966 332 aaPredicted RBP18.79■□□□□ 0.6
SPIN3-217ENST00000639000 PHKA1P46020 1223 aa18.79■□□□□ 0.6
SPIN3-217ENST00000639000 CCDC102BQ68D86 513 aa18.79■□□□□ 0.6
SPIN3-217ENST00000639000 VPS37DQ86XT2 251 aa18.79■□□□□ 0.6
SPIN3-217ENST00000639000 STRBPQ96SI9 672 aaKnown RBP18.79■□□□□ 0.6
SPIN3-217ENST00000639000 IFNKQ9P0W0 207 aa18.79■□□□□ 0.6
SPIN3-217ENST00000639000 PRDM4Q9UKN5 801 aa18.79■□□□□ 0.6
SPIN3-217ENST00000639000 WWC3Q9ULE0 1092 aa18.79■□□□□ 0.6
SPIN3-217ENST00000639000 BIN1O00499 593 aa18.78■□□□□ 0.6
SPIN3-217ENST00000639000 NAA30Q147X3 362 aaPredicted RBP18.78■□□□□ 0.6
SPIN3-217ENST00000639000 ARMCX5Q6P1M9 558 aa18.78■□□□□ 0.6
SPIN3-217ENST00000639000 SHC4Q6S5L8 630 aa18.78■□□□□ 0.6
SPIN3-217ENST00000639000 TMEM87BQ96K49 555 aa18.78■□□□□ 0.6
SPIN3-217ENST00000639000 SLC4A9Q96Q91 983 aa18.78■□□□□ 0.6
SPIN3-217ENST00000639000 HSD3B7Q9H2F3 369 aa18.78■□□□□ 0.6
SPIN3-217ENST00000639000 LY9Q9HBG7 655 aa18.78■□□□□ 0.6
SPIN3-217ENST00000639000 B4E1Z4 1266 aa18.78■□□□□ 0.6
SPIN3-217ENST00000639000 IKBKBO14920 756 aa18.78■□□□□ 0.6
SPIN3-217ENST00000639000 IDH1O75874 414 aaKnown RBP18.78■□□□□ 0.6
SPIN3-217ENST00000639000 RXRAP19793 462 aa18.78■□□□□ 0.6
SPIN3-217ENST00000639000 FGFR2P21802 821 aa18.78■□□□□ 0.6
SPIN3-217ENST00000639000 U2AF2P26368 475 aaKnown RBP eCLIP18.78■□□□□ 0.68e-6■■■■□ 19.7
SPIN3-217ENST00000639000 EVA1CP58658 441 aa18.78■□□□□ 0.6
SPIN3-217ENST00000639000 CBX1P83916 185 aa18.78■□□□□ 0.6
SPIN3-217ENST00000639000 ZRSR1Q15695 479 aaKnown RBP18.78■□□□□ 0.6
SPIN3-217ENST00000639000 SGMS1Q86VZ5 419 aa18.78■□□□□ 0.6
SPIN3-217ENST00000639000 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.78■□□□□ 0.6
SPIN3-217ENST00000639000 LRP6O75581 1613 aa18.77■□□□□ 0.6
SPIN3-217ENST00000639000 UQCRFS1P1P0C7P4 283 aa18.77■□□□□ 0.6
SPIN3-217ENST00000639000 CYP19A1P11511 503 aaPredicted RBP18.77■□□□□ 0.6
SPIN3-217ENST00000639000 PHKBQ93100 1093 aa18.77■□□□□ 0.6
SPIN3-217ENST00000639000 TRMT1Q9NXH9 659 aaKnown RBP18.77■□□□□ 0.6
SPIN3-217ENST00000639000 RANBP6O60518 1105 aaKnown RBP18.77■□□□□ 0.59
SPIN3-217ENST00000639000 ZSCAN20P17040 1043 aaPredicted RBP18.77■□□□□ 0.59
SPIN3-217ENST00000639000 SYKP43405 635 aa18.77■□□□□ 0.59
SPIN3-217ENST00000639000 E4F1Q66K89 784 aaPredicted RBP18.77■□□□□ 0.59
SPIN3-217ENST00000639000 CCDC150Q8NCX0 1101 aa18.77■□□□□ 0.59
SPIN3-217ENST00000639000 ZNF592Q92610 1267 aa18.77■□□□□ 0.59
SPIN3-217ENST00000639000 TACC3Q9Y6A5 838 aa18.77■□□□□ 0.59
SPIN3-217ENST00000639000 LRP5O75197 1615 aa18.76■□□□□ 0.59
SPIN3-217ENST00000639000 MYO5AQ9Y4I1 1855 aaKnown RBP18.76■□□□□ 0.59
SPIN3-217ENST00000639000 PDE8AO60658 829 aa18.76■□□□□ 0.59
SPIN3-217ENST00000639000 SMC2O95347 1197 aa18.76■□□□□ 0.59
SPIN3-217ENST00000639000 APPP05067 770 aa18.76■□□□□ 0.59
SPIN3-217ENST00000639000 RESP18Q5W5W9 173 aa18.76■□□□□ 0.59
SPIN3-217ENST00000639000 TMC6Q7Z403 805 aa18.76■□□□□ 0.59
SPIN3-217ENST00000639000 EPB41L4AQ9HCS5 686 aaPredicted RBP18.76■□□□□ 0.59
SPIN3-217ENST00000639000 ZBTB43O43298 467 aa18.75■□□□□ 0.59
SPIN3-217ENST00000639000 KCNJ6P48051 423 aa18.75■□□□□ 0.59
SPIN3-217ENST00000639000 CPLX2Q6PUV4 134 aaKnown RBP18.75■□□□□ 0.59
SPIN3-217ENST00000639000 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.75■□□□□ 0.59
SPIN3-217ENST00000639000 INCENPQ9NQS7 918 aa18.75■□□□□ 0.59
SPIN3-217ENST00000639000 PRDM10Q9NQV6 1147 aa18.75■□□□□ 0.59
SPIN3-217ENST00000639000 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.75■□□□□ 0.59
SPIN3-217ENST00000639000 TRMT112Q9UI30 125 aaKnown RBP18.75■□□□□ 0.59
SPIN3-217ENST00000639000 TBC1D2BQ9UPU7 963 aa18.75■□□□□ 0.59
SPIN3-217ENST00000639000 PATL2C9JE40 543 aaKnown RBP18.75■□□□□ 0.59
SPIN3-217ENST00000639000 LIFRP42702 1097 aa18.75■□□□□ 0.59
SPIN3-217ENST00000639000 MICU3Q86XE3 530 aa18.75■□□□□ 0.59
SPIN3-217ENST00000639000 JMYQ8N9B5 988 aa18.75■□□□□ 0.59
SPIN3-217ENST00000639000 LPIN2Q92539 896 aa18.75■□□□□ 0.59
SPIN3-217ENST00000639000 PKNOX2Q96KN3 472 aa18.75■□□□□ 0.59
SPIN3-217ENST00000639000 FEZ1Q99689 392 aa18.75■□□□□ 0.59
SPIN3-217ENST00000639000 ANKRD36CQ5JPF3 1778 aa18.75■□□□□ 0.59
SPIN3-217ENST00000639000 UBN2Q6ZU65 1347 aa18.74■□□□□ 0.59
SPIN3-217ENST00000639000 STK36Q9NRP7 1315 aa18.74■□□□□ 0.59
SPIN3-217ENST00000639000 TPM4P67936 248 aa18.74■□□□□ 0.59
SPIN3-217ENST00000639000 FANCCQ00597 558 aa18.74■□□□□ 0.59
SPIN3-217ENST00000639000 PUM3Q15397 648 aaKnown RBP18.74■□□□□ 0.59
SPIN3-217ENST00000639000 ECM29Q5VYK3 1845 aa18.74■□□□□ 0.59
SPIN3-217ENST00000639000 MYH3P11055 1940 aa18.74■□□□□ 0.59
SPIN3-217ENST00000639000 PSDA5PKW4 1024 aaPredicted RBP18.73■□□□□ 0.59
SPIN3-217ENST00000639000 SPDYE4A6NLX3 237 aa18.73■□□□□ 0.59
SPIN3-217ENST00000639000 GOLGA8AA7E2F4 631 aa18.73■□□□□ 0.59
SPIN3-217ENST00000639000 KIF2AO00139 706 aaPredicted RBP18.73■□□□□ 0.59
SPIN3-217ENST00000639000 IARSP41252 1262 aaKnown RBP18.73■□□□□ 0.59
SPIN3-217ENST00000639000 TMEM67Q5HYA8 995 aa18.73■□□□□ 0.59
SPIN3-217ENST00000639000 IFNL3Q8IZI9 196 aa18.73■□□□□ 0.59
SPIN3-217ENST00000639000 CGNQ9P2M7 1197 aaKnown RBP18.73■□□□□ 0.59
SPIN3-217ENST00000639000 ZNF215Q9UL58 517 aaPredicted RBP18.73■□□□□ 0.59
SPIN3-217ENST00000639000 ZBTB1Q9Y2K1 713 aa18.73■□□□□ 0.59
SPIN3-217ENST00000639000 NID2Q14112 1375 aa18.73■□□□□ 0.59
SPIN3-217ENST00000639000 BCL9O00512 1426 aa18.73■□□□□ 0.59
SPIN3-217ENST00000639000 ERVV-1B6SEH8 477 aa18.73■□□□□ 0.59
SPIN3-217ENST00000639000 UBE2Q2LH0YL09 131 aa18.73■□□□□ 0.59
SPIN3-217ENST00000639000 CUTAO60888 179 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms