RNA–Protein interactions for RNA: ENST00000638175.1

SCARB2-206, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-206ENST00000638175 PHKG2P15735 406 aa8.21□□□□□ -1.1
SCARB2-206ENST00000638175 SCNN1AP37088 669 aa8.21□□□□□ -1.1
SCARB2-206ENST00000638175 RASSF7Q02833 373 aa8.21□□□□□ -1.1
SCARB2-206ENST00000638175 C1orf141Q5JVX7 400 aa8.21□□□□□ -1.1
SCARB2-206ENST00000638175 FAM182BQ5T319 152 aa8.21□□□□□ -1.1
SCARB2-206ENST00000638175 ZNF530Q6P9A1 599 aaPredicted RBP8.21□□□□□ -1.1
SCARB2-206ENST00000638175 ZSCAN10Q96SZ4 725 aaPredicted RBP8.21□□□□□ -1.1
SCARB2-206ENST00000638175 MAP3K5Q99683 1374 aa8.21□□□□□ -1.1
SCARB2-206ENST00000638175 KDM6AO15550 1401 aaPredicted RBP8.2□□□□□ -1.1
SCARB2-206ENST00000638175 SPATA31C2B4DYI2 1134 aa8.2□□□□□ -1.1
SCARB2-206ENST00000638175 EML1O00423 815 aa8.2□□□□□ -1.1
SCARB2-206ENST00000638175 TRIM37O94972 964 aa8.2□□□□□ -1.1
SCARB2-206ENST00000638175 PRKAR2BP31323 418 aa8.2□□□□□ -1.1
SCARB2-206ENST00000638175 BAG6P46379 1132 aa8.2□□□□□ -1.1
SCARB2-206ENST00000638175 WDR43Q15061 677 aaKnown RBP eCLIP8.2□□□□□ -1.1
SCARB2-206ENST00000638175 SND1Q7KZF4 910 aaKnown RBP eCLIP8.2□□□□□ -1.1
SCARB2-206ENST00000638175 RHBDD1Q8TEB9 315 aa8.2□□□□□ -1.1
SCARB2-206ENST00000638175 ZDHHC1Q8WTX9 485 aa8.2□□□□□ -1.1
SCARB2-206ENST00000638175 SERPINB4P48594 390 aa8.19□□□□□ -1.1
SCARB2-206ENST00000638175 AKAP4Q5JQC9 854 aa8.19□□□□□ -1.1
SCARB2-206ENST00000638175 TBCELQ5QJ74 424 aa8.19□□□□□ -1.1
SCARB2-206ENST00000638175 TMEM151AQ8N4L1 468 aa8.19□□□□□ -1.1
SCARB2-206ENST00000638175 ZNF837Q96EG3 531 aaPredicted RBP8.19□□□□□ -1.1
SCARB2-206ENST00000638175 DCAF5Q96JK2 942 aa8.19□□□□□ -1.1
SCARB2-206ENST00000638175 TJP1Q07157 1748 aa8.19□□□□□ -1.1
SCARB2-206ENST00000638175 MAPK8IP3Q9UPT6 1336 aa8.19□□□□□ -1.1
SCARB2-206ENST00000638175 UBR3Q6ZT12 1888 aa8.19□□□□□ -1.1
SCARB2-206ENST00000638175 SOWAHDA6NJG2 315 aa8.18□□□□□ -1.1
SCARB2-206ENST00000638175 GDF11O95390 407 aa8.18□□□□□ -1.1
SCARB2-206ENST00000638175 POU4F2Q12837 409 aa8.18□□□□□ -1.1
SCARB2-206ENST00000638175 DBN1Q16643 649 aa8.18□□□□□ -1.1
SCARB2-206ENST00000638175 MTHFSDQ2M296 383 aaKnown RBP8.18□□□□□ -1.1
SCARB2-206ENST00000638175 LYPD4Q6UWN0 246 aa8.18□□□□□ -1.1
SCARB2-206ENST00000638175 CAPN12Q6ZSI9 719 aa8.18□□□□□ -1.1
SCARB2-206ENST00000638175 MYO19Q96H55 970 aa8.18□□□□□ -1.1
SCARB2-206ENST00000638175 MKNK1Q9BUB5 465 aa8.18□□□□□ -1.1
SCARB2-206ENST00000638175 SEPT3Q9UH03 358 aa8.18□□□□□ -1.1
SCARB2-206ENST00000638175 C4BP0C0L5 1744 aa8.17□□□□□ -1.1
SCARB2-206ENST00000638175 ERVV-2B6SEH9 535 aa8.17□□□□□ -1.1
SCARB2-206ENST00000638175 PLSCR1O15162 318 aa8.17□□□□□ -1.1
SCARB2-206ENST00000638175 NOS2P35228 1153 aa8.17□□□□□ -1.1
SCARB2-206ENST00000638175 SRSF11Q05519 484 aaKnown RBP8.17□□□□□ -1.1
SCARB2-206ENST00000638175 DIEXFQ68CQ4 756 aaKnown RBP8.17□□□□□ -1.1
SCARB2-206ENST00000638175 TRIM22Q8IYM9 498 aa8.17□□□□□ -1.1
SCARB2-206ENST00000638175 PLEKHF1Q96S99 279 aa8.17□□□□□ -1.1
SCARB2-206ENST00000638175 NIFKQ9BYG3 293 aaKnown RBP8.17□□□□□ -1.1
SCARB2-206ENST00000638175 MRS2Q9HD23 443 aa8.17□□□□□ -1.1
SCARB2-206ENST00000638175 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.17□□□□□ -1.1
SCARB2-206ENST00000638175 CHMP3Q9Y3E7 222 aa8.17□□□□□ -1.1
SCARB2-206ENST00000638175 CACNA1FO60840 1977 aa8.17□□□□□ -1.1
SCARB2-206ENST00000638175 SERTM1A2A2V5 107 aa8.16□□□□□ -1.1
SCARB2-206ENST00000638175 GNAT3A8MTJ3 354 aa8.16□□□□□ -1.1
SCARB2-206ENST00000638175 GPR25O00155 361 aa8.16□□□□□ -1.1
SCARB2-206ENST00000638175 HTATSF1O43719 755 aaKnown RBP8.16□□□□□ -1.1
SCARB2-206ENST00000638175 APBA3O96018 575 aa8.16□□□□□ -1.1
SCARB2-206ENST00000638175 HMGB2P26583 209 aaKnown RBP8.16□□□□□ -1.1
SCARB2-206ENST00000638175 TMCO4Q5TGY1 634 aa8.16□□□□□ -1.1
SCARB2-206ENST00000638175 RIPOR1Q6ZS17 1223 aa8.16□□□□□ -1.1
SCARB2-206ENST00000638175 MYH14Q7Z406 1995 aaKnown RBP8.16□□□□□ -1.1
SCARB2-206ENST00000638175 HELQQ8TDG4 1101 aa8.16□□□□□ -1.1
SCARB2-206ENST00000638175 GTF3C2Q8WUA4 911 aaPredicted RBP8.16□□□□□ -1.1
SCARB2-206ENST00000638175 CEMIPQ8WUJ3 1361 aa8.16□□□□□ -1.1
SCARB2-206ENST00000638175 SYTL4Q96C24 671 aaPredicted RBP8.16□□□□□ -1.1
SCARB2-206ENST00000638175 ACSBG1Q96GR2 724 aa8.16□□□□□ -1.1
SCARB2-206ENST00000638175 TMOD3Q9NYL9 352 aa8.16□□□□□ -1.1
SCARB2-206ENST00000638175 CASZ1Q86V15 1759 aa8.15□□□□□ -1.1
SCARB2-206ENST00000638175 C4AP0C0L4 1744 aa8.15□□□□□ -1.1
SCARB2-206ENST00000638175 CCER2I3L3R5 266 aa8.15□□□□□ -1.1
SCARB2-206ENST00000638175 KCNQ2O43526 872 aa8.15□□□□□ -1.1
SCARB2-206ENST00000638175 ICMTO60725 284 aa8.15□□□□□ -1.1
SCARB2-206ENST00000638175 NPR3P17342 541 aa8.15□□□□□ -1.1
SCARB2-206ENST00000638175 LMOD3Q0VAK6 560 aa8.15□□□□□ -1.1
SCARB2-206ENST00000638175 C4orf17Q53FE4 359 aa8.15□□□□□ -1.1
SCARB2-206ENST00000638175 WDR44Q5JSH3 913 aa8.15□□□□□ -1.1
SCARB2-206ENST00000638175 GNASQ5JWF2 1037 aa8.15□□□□□ -1.1
SCARB2-206ENST00000638175 SLC27A3Q5K4L6 730 aa8.15□□□□□ -1.1
SCARB2-206ENST00000638175 SH3PXD2AQ5TCZ1 1133 aa8.15□□□□□ -1.1
SCARB2-206ENST00000638175 TMEM214Q6NUQ4 689 aaKnown RBP8.15□□□□□ -1.1
SCARB2-206ENST00000638175 SMARCC1Q92922 1105 aaPredicted RBP8.15□□□□□ -1.1
SCARB2-206ENST00000638175 VTI1AQ96AJ9 217 aa8.15□□□□□ -1.1
SCARB2-206ENST00000638175 RUNDC1Q96C34 613 aa8.15□□□□□ -1.1
SCARB2-206ENST00000638175 PHACTR3Q96KR7 559 aa8.15□□□□□ -1.1
SCARB2-206ENST00000638175 DYRK1BQ9Y463 629 aa8.15□□□□□ -1.1
SCARB2-206ENST00000638175 DNMT3AQ9Y6K1 912 aaPredicted RBP8.15□□□□□ -1.1
SCARB2-206ENST00000638175 COL24A1Q17RW2 1714 aa8.15□□□□□ -1.11
SCARB2-206ENST00000638175 KCPQ6ZWJ8 1503 aa8.14□□□□□ -1.11
SCARB2-206ENST00000638175 PALLDQ8WX93 1383 aa8.14□□□□□ -1.11
SCARB2-206ENST00000638175 RNF225M0QZC1 329 aaPredicted RBP8.14□□□□□ -1.11
SCARB2-206ENST00000638175 RNMTO43148 476 aaKnown RBP8.14□□□□□ -1.11
SCARB2-206ENST00000638175 CELA2BP08218 269 aaPredicted RBP8.14□□□□□ -1.11
SCARB2-206ENST00000638175 GTF2E1P29083 439 aaPredicted RBP8.14□□□□□ -1.11
SCARB2-206ENST00000638175 IRS1P35568 1242 aa8.14□□□□□ -1.11
SCARB2-206ENST00000638175 NFE2L2Q16236 605 aa8.14□□□□□ -1.11
SCARB2-206ENST00000638175 C16orf46Q6P387 395 aa8.14□□□□□ -1.11
SCARB2-206ENST00000638175 NBPF10Q6P3W6 841 aaKnown RBP8.14□□□□□ -1.11
SCARB2-206ENST00000638175 MPRIPQ6WCQ1 1025 aa8.14□□□□□ -1.11
SCARB2-206ENST00000638175 DEFB132Q7Z7B7 95 aa8.14□□□□□ -1.11
SCARB2-206ENST00000638175 PNISRQ8TF01 805 aaKnown RBP8.14□□□□□ -1.11
SCARB2-206ENST00000638175 RTF1Q92541 710 aaKnown RBP8.14□□□□□ -1.11
SCARB2-206ENST00000638175 CAMKK2Q96RR4 588 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms