RNA–Protein interactions for RNA: ENST00000637278.1

CLN5-217, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 2,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-217ENST00000637278 DCTN4Q9UJW0 460 aa9.09□□□□□ -0.95
CLN5-217ENST00000637278 QSER1Q2KHR3 1735 aa9.08□□□□□ -0.96
CLN5-217ENST00000637278 SLC26A4O43511 780 aa9.08□□□□□ -0.96
CLN5-217ENST00000637278 PIP5K1CO60331 668 aa9.08□□□□□ -0.96
CLN5-217ENST00000637278 CASQ1P31415 396 aa9.08□□□□□ -0.96
CLN5-217ENST00000637278 SUN2Q9UH99 717 aa9.08□□□□□ -0.96
CLN5-217ENST00000637278 KIF20BQ96Q89 1820 aa9.08□□□□□ -0.96
CLN5-217ENST00000637278 ICMTO60725 284 aa9.08□□□□□ -0.96
CLN5-217ENST00000637278 COL9A1P20849 921 aa9.08□□□□□ -0.96
CLN5-217ENST00000637278 R3HDM1Q15032 1099 aaKnown RBP9.08□□□□□ -0.96
CLN5-217ENST00000637278 A0A1W2PP64 1363 aa9.08□□□□□ -0.96
CLN5-217ENST00000637278 ANKRD36BQ8N2N9 1353 aa9.08□□□□□ -0.96
CLN5-217ENST00000637278 CCDC66A2RUB6 948 aa9.07□□□□□ -0.96
CLN5-217ENST00000637278 TGFB3P10600 412 aa9.07□□□□□ -0.96
CLN5-217ENST00000637278 NOP2P46087 812 aaKnown RBP9.07□□□□□ -0.96
CLN5-217ENST00000637278 KCTD2Q14681 263 aa9.07□□□□□ -0.96
CLN5-217ENST00000637278 CCDC93Q567U6 631 aa9.07□□□□□ -0.96
CLN5-217ENST00000637278 FAM184AQ8NB25 1140 aa9.07□□□□□ -0.96
CLN5-217ENST00000637278 ERCC4Q92889 916 aaPredicted RBP9.07□□□□□ -0.96
CLN5-217ENST00000637278 SEZ6LQ9BYH1 1024 aa9.07□□□□□ -0.96
CLN5-217ENST00000637278 CHCHD3Q9NX63 227 aaKnown RBP9.07□□□□□ -0.96
CLN5-217ENST00000637278 CWC25Q9NXE8 425 aaPredicted RBP9.07□□□□□ -0.96
CLN5-217ENST00000637278 LZTS1Q9Y250 596 aa9.07□□□□□ -0.96
CLN5-217ENST00000637278 KIF3AQ9Y496 699 aa9.07□□□□□ -0.96
CLN5-217ENST00000637278 KIF24Q5T7B8 1368 aa9.07□□□□□ -0.96
CLN5-217ENST00000637278 PSDA5PKW4 1024 aaPredicted RBP9.07□□□□□ -0.96
CLN5-217ENST00000637278 WASHC4Q2M389 1173 aa9.07□□□□□ -0.96
CLN5-217ENST00000637278 SLC45A1Q9Y2W3 748 aa9.07□□□□□ -0.96
CLN5-217ENST00000637278 PER1O15534 1290 aaPredicted RBP9.06□□□□□ -0.96
CLN5-217ENST00000637278 CTSHP09668 335 aa9.06□□□□□ -0.96
CLN5-217ENST00000637278 C11orf91Q3C1V1 193 aa9.06□□□□□ -0.96
CLN5-217ENST00000637278 FAM182BQ5T319 152 aa9.06□□□□□ -0.96
CLN5-217ENST00000637278 DZIP3Q86Y13 1208 aaKnown RBP9.06□□□□□ -0.96
CLN5-217ENST00000637278 CFAP53Q96M91 514 aa9.06□□□□□ -0.96
CLN5-217ENST00000637278 SYNRGQ9UMZ2 1314 aa9.06□□□□□ -0.96
CLN5-217ENST00000637278 FMNL1O95466 1100 aaPredicted RBP9.06□□□□□ -0.96
CLN5-217ENST00000637278 CDC27P30260 824 aa9.06□□□□□ -0.96
CLN5-217ENST00000637278 Q3C1V9 767 aa9.06□□□□□ -0.96
CLN5-217ENST00000637278 ARNT2Q9HBZ2 717 aa9.06□□□□□ -0.96
CLN5-217ENST00000637278 AVENQ9NQS1 362 aaPredicted RBP9.06□□□□□ -0.96
CLN5-217ENST00000637278 RSPH14Q9UHP6 348 aa9.06□□□□□ -0.96
CLN5-217ENST00000637278 LDHBP07195 334 aaKnown RBP9.06□□□□□ -0.96
CLN5-217ENST00000637278 NR1H3Q13133 447 aa9.06□□□□□ -0.96
CLN5-217ENST00000637278 LILRB2Q8N423 598 aa9.06□□□□□ -0.96
CLN5-217ENST00000637278 GMLQ99445 158 aa9.06□□□□□ -0.96
CLN5-217ENST00000637278 RSPH9Q9H1X1 276 aaPredicted RBP9.06□□□□□ -0.96
CLN5-217ENST00000637278 PAPPAQ13219 1627 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 SORBS3O60504 671 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 ALDH1L1O75891 902 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 ETFBP38117 255 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 RAB27AP51159 221 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 SEC13P55735 322 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 NFX1Q12986 1120 aaKnown RBP9.05□□□□□ -0.96
CLN5-217ENST00000637278 OCLNQ16625 522 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 TRIM74Q86UV6 250 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 TRIM73Q86UV7 250 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 FAM200AQ8TCP9 573 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 NELL1Q92832 810 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 SPON1Q9HCB6 807 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 SMG6Q86US8 1419 aaKnown RBP9.05□□□□□ -0.96
CLN5-217ENST00000637278 KIF3CO14782 793 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 IL2RBP14784 551 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 GUCY2CP25092 1073 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 DSG3P32926 999 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 ADD2P35612 726 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 CHMP4BP1P59074 171 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 TMF1P82094 1093 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 IL31Q6EBC2 164 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 PLPP6Q8IY26 295 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 MRFAP1L1Q96HT8 127 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 AGBL1Q96MI9 1066 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 SENP7Q9BQF6 1050 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 SNTG2Q9NY99 539 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 AXIN2Q9Y2T1 843 aa9.05□□□□□ -0.96
CLN5-217ENST00000637278 FGAP02671 866 aa9.04□□□□□ -0.96
CLN5-217ENST00000637278 XRCC5P13010 732 aaKnown RBP9.04□□□□□ -0.96
CLN5-217ENST00000637278 FAM160A1Q05DH4 1040 aa9.04□□□□□ -0.96
CLN5-217ENST00000637278 TTF1Q15361 905 aaPredicted RBP9.04□□□□□ -0.96
CLN5-217ENST00000637278 COG3Q96JB2 828 aa9.04□□□□□ -0.96
CLN5-217ENST00000637278 EIF2AK1Q9BQI3 630 aaKnown RBP9.04□□□□□ -0.96
CLN5-217ENST00000637278 MRGBPQ9NV56 204 aa9.04□□□□□ -0.96
CLN5-217ENST00000637278 PLEKHG2Q9H7P9 1386 aa9.04□□□□□ -0.96
CLN5-217ENST00000637278 CGNL1Q0VF96 1302 aa9.04□□□□□ -0.96
CLN5-217ENST00000637278 NBNO60934 754 aa9.04□□□□□ -0.96
CLN5-217ENST00000637278 KATNA1O75449 491 aa9.04□□□□□ -0.96
CLN5-217ENST00000637278 NEK3P51956 506 aa9.04□□□□□ -0.96
CLN5-217ENST00000637278 INHBEP58166 350 aa9.04□□□□□ -0.96
CLN5-217ENST00000637278 SWT1Q5T5J6 900 aaKnown RBP9.04□□□□□ -0.96
CLN5-217ENST00000637278 IP6K1Q92551 441 aa9.04□□□□□ -0.96
CLN5-217ENST00000637278 CLP1Q92989 425 aaKnown RBP9.04□□□□□ -0.96
CLN5-217ENST00000637278 EMID1Q96A84 441 aaPredicted RBP9.04□□□□□ -0.96
CLN5-217ENST00000637278 CDC5LQ99459 802 aaKnown RBP9.04□□□□□ -0.96
CLN5-217ENST00000637278 PRM3Q9NNZ6 103 aa9.04□□□□□ -0.96
CLN5-217ENST00000637278 PICK1Q9NRD5 415 aa9.04□□□□□ -0.96
CLN5-217ENST00000637278 LEMD3Q9Y2U8 911 aa9.04□□□□□ -0.96
CLN5-217ENST00000637278 MRPS23Q9Y3D9 190 aaKnown RBP9.04□□□□□ -0.96
CLN5-217ENST00000637278 PAXBP1Q9Y5B6 917 aa9.04□□□□□ -0.96
CLN5-217ENST00000637278 BTAF1O14981 1849 aa9.04□□□□□ -0.96
CLN5-217ENST00000637278 KCNQ2O43526 872 aa9.03□□□□□ -0.96
CLN5-217ENST00000637278 POU3F3P20264 500 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms