RNA–Protein interactions for RNA: ENST00000635293.1

TP53-228, Transcript of tumor protein p53, humanhuman

TSL 5

Gene TP53, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-228ENST00000635293 STAG1Q8WVM7 1258 aa13.73□□□□□ -0.21
TP53-228ENST00000635293 LRRC2Q9BYS8 371 aa13.73□□□□□ -0.21
TP53-228ENST00000635293 KRT23Q9C075 422 aa13.73□□□□□ -0.21
TP53-228ENST00000635293 RNF41Q9H4P4 317 aaPredicted RBP13.73□□□□□ -0.21
TP53-228ENST00000635293 CD209Q9NNX6 404 aa13.73□□□□□ -0.21
TP53-228ENST00000635293 MYH15Q9Y2K3 1946 aa13.72□□□□□ -0.21
TP53-228ENST00000635293 LDHBP07195 334 aaKnown RBP13.72□□□□□ -0.21
TP53-228ENST00000635293 ZSCAN22P10073 491 aaPredicted RBP13.72□□□□□ -0.21
TP53-228ENST00000635293 SYT1P21579 422 aa13.72□□□□□ -0.21
TP53-228ENST00000635293 PRDX5P30044 214 aa13.72□□□□□ -0.21
TP53-228ENST00000635293 ANTXR2P58335 489 aa13.72□□□□□ -0.21
TP53-228ENST00000635293 AKNAD1Q5T1N1 836 aa13.72□□□□□ -0.21
TP53-228ENST00000635293 TMEM87BQ96K49 555 aa13.72□□□□□ -0.21
TP53-228ENST00000635293 MTA3Q9BTC8 594 aa13.72□□□□□ -0.21
TP53-228ENST00000635293 CRNKL1Q9BZJ0 848 aaKnown RBP13.72□□□□□ -0.21
TP53-228ENST00000635293 TMX4Q9H1E5 349 aaPredicted RBP13.72□□□□□ -0.21
TP53-228ENST00000635293 ANAPC4Q9UJX5 808 aa13.72□□□□□ -0.21
TP53-228ENST00000635293 ATP6V1DQ9Y5K8 247 aa13.72□□□□□ -0.21
TP53-228ENST00000635293 FOCADQ5VW36 1801 aa13.72□□□□□ -0.21
TP53-228ENST00000635293 KIF13BQ9NQT8 1826 aa13.72□□□□□ -0.21
TP53-228ENST00000635293 DDX60LQ5H9U9 1706 aaKnown RBP13.72□□□□□ -0.21
TP53-228ENST00000635293 PRKAB2O43741 272 aa13.72□□□□□ -0.21
TP53-228ENST00000635293 PCP11498 1178 aaKnown RBP13.72□□□□□ -0.21
TP53-228ENST00000635293 HMGN5P82970 282 aaKnown RBP13.72□□□□□ -0.21
TP53-228ENST00000635293 APOBRQ0VD83 1088 aa13.72□□□□□ -0.21
TP53-228ENST00000635293 SLC51AQ86UW1 340 aa13.72□□□□□ -0.21
TP53-228ENST00000635293 TBC1D22AQ8WUA7 517 aa13.72□□□□□ -0.21
TP53-228ENST00000635293 POLLQ9UGP5 575 aa13.72□□□□□ -0.21
TP53-228ENST00000635293 KIF3AQ9Y496 699 aa13.72□□□□□ -0.21
TP53-228ENST00000635293 NEDD4P46934 1319 aa13.72□□□□□ -0.21
TP53-228ENST00000635293 STK3Q13188 491 aa13.71□□□□□ -0.21
TP53-228ENST00000635293 SMARCC2Q8TAQ2 1214 aa13.71□□□□□ -0.21
TP53-228ENST00000635293 FAM205AQ6ZU69 1335 aa13.71□□□□□ -0.21
TP53-228ENST00000635293 C10orf71Q711Q0 1435 aa13.71□□□□□ -0.22
TP53-228ENST00000635293 SLX4Q8IY92 1834 aa13.71□□□□□ -0.22
TP53-228ENST00000635293 TCHHQ07283 1943 aa13.71□□□□□ -0.22
TP53-228ENST00000635293 C6orf229H3BNL8 230 aa13.7□□□□□ -0.22
TP53-228ENST00000635293 F13A1P00488 732 aa13.7□□□□□ -0.22
TP53-228ENST00000635293 LDHCP07864 332 aa13.7□□□□□ -0.22
TP53-228ENST00000635293 PPARAQ07869 468 aa13.7□□□□□ -0.22
TP53-228ENST00000635293 SCRN1Q12765 414 aa13.7□□□□□ -0.22
TP53-228ENST00000635293 MCTP1Q6DN14 999 aa13.7□□□□□ -0.22
TP53-228ENST00000635293 MFSD6Q6ZSS7 791 aa13.7□□□□□ -0.22
TP53-228ENST00000635293 C2CD5Q86YS7 1000 aa13.7□□□□□ -0.22
TP53-228ENST00000635293 MPNDQ8N594 471 aa13.7□□□□□ -0.22
TP53-228ENST00000635293 COA1Q9GZY4 146 aa13.7□□□□□ -0.22
TP53-228ENST00000635293 ANGEL1Q9UNK9 670 aaKnown RBP13.7□□□□□ -0.22
TP53-228ENST00000635293 ECM29Q5VYK3 1845 aa13.7□□□□□ -0.22
TP53-228ENST00000635293 H0YIN7 160 aa13.7□□□□□ -0.22
TP53-228ENST00000635293 SH2B2O14492 632 aaPredicted RBP13.7□□□□□ -0.22
TP53-228ENST00000635293 PDIA3P30101 505 aaKnown RBP13.7□□□□□ -0.22
TP53-228ENST00000635293 DYNLL1P63167 89 aaKnown RBP13.7□□□□□ -0.22
TP53-228ENST00000635293 GPR101Q96P66 508 aaPredicted RBP13.7□□□□□ -0.22
TP53-228ENST00000635293 ATP8A2Q9NTI2 1148 aa13.7□□□□□ -0.22
TP53-228ENST00000635293 BRPF3Q9ULD4 1205 aa13.7□□□□□ -0.22
TP53-228ENST00000635293 MTMR6Q9Y217 621 aa13.7□□□□□ -0.22
TP53-228ENST00000635293 ZNF646O15015 1829 aaPredicted RBP13.69□□□□□ -0.22
TP53-228ENST00000635293 B4E1Z4 1266 aa13.69□□□□□ -0.22
TP53-228ENST00000635293 DHX16O60231 1041 aaKnown RBP13.69□□□□□ -0.22
TP53-228ENST00000635293 NT5C2P49902 561 aa13.69□□□□□ -0.22
TP53-228ENST00000635293 LARP1BQ659C4 914 aaKnown RBP13.69□□□□□ -0.22
TP53-228ENST00000635293 CHST3Q7LGC8 479 aa13.69□□□□□ -0.22
TP53-228ENST00000635293 SLF2Q8IX21 1173 aa13.69□□□□□ -0.22
TP53-228ENST00000635293 NSUN7Q8NE18 718 aaKnown RBP13.69□□□□□ -0.22
TP53-228ENST00000635293 SDR42E1Q8WUS8 393 aa13.69□□□□□ -0.22
TP53-228ENST00000635293 EYA3Q99504 573 aa13.69□□□□□ -0.22
TP53-228ENST00000635293 NOL10Q9BSC4 688 aaKnown RBP13.69□□□□□ -0.22
TP53-228ENST00000635293 ARPP21Q9UBL0 812 aaPredicted RBP13.69□□□□□ -0.22
TP53-228ENST00000635293 NID2Q14112 1375 aa13.68□□□□□ -0.22
TP53-228ENST00000635293 MROH7-TTC4A0A0A0MT08 1334 aa13.68□□□□□ -0.22
TP53-228ENST00000635293 KLF18A0A0U1RQI7 1052 aa13.68□□□□□ -0.22
TP53-228ENST00000635293 GOLGA8BA8MQT2 603 aa13.68□□□□□ -0.22
TP53-228ENST00000635293 CTDSPL2Q05D32 466 aa13.68□□□□□ -0.22
TP53-228ENST00000635293 DPP8Q6V1X1 898 aaPredicted RBP13.68□□□□□ -0.22
TP53-228ENST00000635293 CYB5R4Q7L1T6 521 aa13.68□□□□□ -0.22
TP53-228ENST00000635293 SGMS1Q86VZ5 419 aa13.68□□□□□ -0.22
TP53-228ENST00000635293 SLC16A10Q8TF71 515 aa13.68□□□□□ -0.22
TP53-228ENST00000635293 CNKSR1Q969H4 720 aa13.68□□□□□ -0.22
TP53-228ENST00000635293 SUGT1Q9Y2Z0 365 aa13.68□□□□□ -0.22
TP53-228ENST00000635293 BAG3O95817 575 aa13.67□□□□□ -0.22
TP53-228ENST00000635293 LIFRP42702 1097 aa13.67□□□□□ -0.22
TP53-228ENST00000635293 PPP4CP60510 307 aa13.67□□□□□ -0.22
TP53-228ENST00000635293 SART3Q15020 963 aaKnown RBP13.67□□□□□ -0.22
TP53-228ENST00000635293 KLHL40Q2TBA0 621 aa13.67□□□□□ -0.22
TP53-228ENST00000635293 SBK1Q52WX2 424 aa13.67□□□□□ -0.22
TP53-228ENST00000635293 FOXD4L5Q5VV16 416 aaPredicted RBP13.67□□□□□ -0.22
TP53-228ENST00000635293 FOXD4L4Q8WXT5 416 aaPredicted RBP13.67□□□□□ -0.22
TP53-228ENST00000635293 ZNF622Q969S3 477 aaKnown RBP eCLIP13.67□□□□□ -0.225e-6■□□□□ 11.2
TP53-228ENST00000635293 AATFQ9NY61 560 aaKnown RBP eCLIP13.67□□□□□ -0.22
TP53-228ENST00000635293 PSME4Q14997 1843 aa13.67□□□□□ -0.22
TP53-228ENST00000635293 FSD2A1L4K1 749 aa13.67□□□□□ -0.22
TP53-228ENST00000635293 PTPDC1A2A3K4 754 aa13.67□□□□□ -0.22
TP53-228ENST00000635293 VPS37CA5D8V6 355 aaPredicted RBP13.67□□□□□ -0.22
TP53-228ENST00000635293 GOLGA6L3A6NEY3 463 aa13.67□□□□□ -0.22
TP53-228ENST00000635293 KDM4AO75164 1064 aa13.67□□□□□ -0.22
TP53-228ENST00000635293 TMEM87AQ8NBN3 555 aa13.67□□□□□ -0.22
TP53-228ENST00000635293 ZC3H12CQ9C0D7 883 aaKnown RBP13.67□□□□□ -0.22
TP53-228ENST00000635293 LMBRD1Q9NUN5 540 aa13.67□□□□□ -0.22
TP53-228ENST00000635293 JAG2Q9Y219 1238 aa13.67□□□□□ -0.22
TP53-228ENST00000635293 ROBO3Q96MS0 1386 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms