RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-223ENST00000631247 ZNF70Q9UC06 446 aaPredicted RBP12.97□□□□□ -0.33
UBE3A-223ENST00000631247 TCP10L2B9ZVM9 353 aa12.96□□□□□ -0.33
UBE3A-223ENST00000631247 FKTNO75072 461 aa12.96□□□□□ -0.33
UBE3A-223ENST00000631247 NOM1Q5C9Z4 860 aaKnown RBP12.96□□□□□ -0.33
UBE3A-223ENST00000631247 OTUD7BQ6GQQ9 843 aa12.96□□□□□ -0.33
UBE3A-223ENST00000631247 DZIP1LQ8IYY4 767 aaKnown RBP12.96□□□□□ -0.33
UBE3A-223ENST00000631247 KLHDC4Q8TBB5 520 aa12.96□□□□□ -0.33
UBE3A-223ENST00000631247 TEKT1Q969V4 418 aa12.96□□□□□ -0.33
UBE3A-223ENST00000631247 TMOD2Q9NZR1 351 aa12.96□□□□□ -0.33
UBE3A-223ENST00000631247 HPS5Q9UPZ3 1129 aa12.96□□□□□ -0.33
UBE3A-223ENST00000631247 MAST3O60307 1309 aa12.95□□□□□ -0.34
UBE3A-223ENST00000631247 UBTFL1P0CB47 393 aaPredicted RBP12.95□□□□□ -0.34
UBE3A-223ENST00000631247 FBXO33Q7Z6M2 555 aa12.95□□□□□ -0.34
UBE3A-223ENST00000631247 CFHR5Q9BXR6 569 aa12.95□□□□□ -0.34
UBE3A-223ENST00000631247 USP44Q9H0E7 712 aa12.95□□□□□ -0.34
UBE3A-223ENST00000631247 KIF16BQ96L93 1317 aa12.94□□□□□ -0.34
UBE3A-223ENST00000631247 USP2O75604 605 aaPredicted RBP12.94□□□□□ -0.34
UBE3A-223ENST00000631247 SLC5A1P13866 664 aa12.94□□□□□ -0.34
UBE3A-223ENST00000631247 FBXO46Q6PJ61 603 aaPredicted RBP12.94□□□□□ -0.34
UBE3A-223ENST00000631247 VGLL2Q8N8G2 317 aa12.94□□□□□ -0.34
UBE3A-223ENST00000631247 BBXQ8WY36 941 aaPredicted RBP12.94□□□□□ -0.34
UBE3A-223ENST00000631247 ELP3Q9H9T3 547 aa12.94□□□□□ -0.34
UBE3A-223ENST00000631247 CSADQ9Y600 493 aa12.94□□□□□ -0.34
UBE3A-223ENST00000631247 EYA2O00167 538 aa12.93□□□□□ -0.34
UBE3A-223ENST00000631247 BCAMP50895 628 aa12.93□□□□□ -0.34
UBE3A-223ENST00000631247 HDLBPQ00341 1268 aaKnown RBP12.93□□□□□ -0.34
UBE3A-223ENST00000631247 OPTNQ96CV9 577 aa12.93□□□□□ -0.34
UBE3A-223ENST00000631247 CDCA7LQ96GN5 454 aa12.93□□□□□ -0.34
UBE3A-223ENST00000631247 TMEM39BQ9GZU3 492 aa12.93□□□□□ -0.34
UBE3A-223ENST00000631247 HDAC5Q9UQL6 1122 aa12.93□□□□□ -0.34
UBE3A-223ENST00000631247 PDE4DIPQ5VU43 2346 aa12.93□□□□□ -0.34
UBE3A-223ENST00000631247 IGF2BP3O00425 579 aaKnown RBP eCLIP12.92□□□□□ -0.34
UBE3A-223ENST00000631247 CT47B1P0C2W7 299 aaPredicted RBP12.92□□□□□ -0.34
UBE3A-223ENST00000631247 CACNB3P54284 484 aa12.92□□□□□ -0.34
UBE3A-223ENST00000631247 PDAP1Q13442 181 aaKnown RBP12.92□□□□□ -0.34
UBE3A-223ENST00000631247 GRIK5Q16478 980 aa12.92□□□□□ -0.34
UBE3A-223ENST00000631247 LPIN2Q92539 896 aa12.92□□□□□ -0.34
UBE3A-223ENST00000631247 HOOK2Q96ED9 719 aa12.92□□□□□ -0.34
UBE3A-223ENST00000631247 ZDHHC15Q96MV8 337 aa12.92□□□□□ -0.34
UBE3A-223ENST00000631247 API5Q9BZZ5 524 aaKnown RBP12.92□□□□□ -0.34
UBE3A-223ENST00000631247 SIL1Q9H173 461 aa12.92□□□□□ -0.34
UBE3A-223ENST00000631247 SUGT1Q9Y2Z0 365 aa12.92□□□□□ -0.34
UBE3A-223ENST00000631247 BRCA2P51587 3418 aa12.91□□□□□ -0.34
UBE3A-223ENST00000631247 WDHD1O75717 1129 aaPredicted RBP12.91□□□□□ -0.34
UBE3A-223ENST00000631247 CRHR2Q13324 411 aa12.91□□□□□ -0.34
UBE3A-223ENST00000631247 VGLL4Q14135 290 aa12.91□□□□□ -0.34
UBE3A-223ENST00000631247 ATP2B3Q16720 1220 aa12.91□□□□□ -0.34
UBE3A-223ENST00000631247 CDAN1Q8IWY9 1227 aa12.91□□□□□ -0.34
UBE3A-223ENST00000631247 SLAIN1Q8ND83 568 aa12.91□□□□□ -0.34
UBE3A-223ENST00000631247 WDR66Q8TBY9 1149 aa12.91□□□□□ -0.34
UBE3A-223ENST00000631247 ERO1AQ96HE7 468 aa12.91□□□□□ -0.34
UBE3A-223ENST00000631247 TEPSINQ96N21 525 aa12.91□□□□□ -0.34
UBE3A-223ENST00000631247 R3HDMLQ9H3Y0 253 aa12.91□□□□□ -0.34
UBE3A-223ENST00000631247 GNL3LQ9NVN8 582 aaKnown RBP12.91□□□□□ -0.34
UBE3A-223ENST00000631247 NOB1Q9ULX3 412 aaKnown RBP12.91□□□□□ -0.34
UBE3A-223ENST00000631247 TRIM17Q9Y577 477 aa12.91□□□□□ -0.34
UBE3A-223ENST00000631247 FGFR2P21802 821 aa12.9□□□□□ -0.34
UBE3A-223ENST00000631247 GJA5P36382 358 aa12.9□□□□□ -0.34
UBE3A-223ENST00000631247 MAP3K9P80192 1104 aa12.9□□□□□ -0.34
UBE3A-223ENST00000631247 CEP126Q9P2H0 1117 aa12.9□□□□□ -0.34
UBE3A-223ENST00000631247 MKI67P46013 3256 aaKnown RBP12.89□□□□□ -0.35
UBE3A-223ENST00000631247 CCL15-CCL14A0A0B4J2E2 113 aa12.89□□□□□ -0.35
UBE3A-223ENST00000631247 CIAO1O76071 339 aa12.89□□□□□ -0.35
UBE3A-223ENST00000631247 RFX5P48382 616 aaPredicted RBP12.89□□□□□ -0.35
UBE3A-223ENST00000631247 GTF2A2P52657 109 aa12.89□□□□□ -0.35
UBE3A-223ENST00000631247 CCL15Q16663 113 aa12.89□□□□□ -0.35
UBE3A-223ENST00000631247 DCAF15Q66K64 600 aa12.89□□□□□ -0.35
UBE3A-223ENST00000631247 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.89□□□□□ -0.35
UBE3A-223ENST00000631247 FAM83AQ86UY5 434 aa12.89□□□□□ -0.35
UBE3A-223ENST00000631247 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.89□□□□□ -0.35
UBE3A-223ENST00000631247 WRNIP1Q96S55 665 aa12.89□□□□□ -0.35
UBE3A-223ENST00000631247 LRRFIP2Q9Y608 721 aaKnown RBP12.89□□□□□ -0.35
UBE3A-223ENST00000631247 AK9Q5TCS8 1911 aa12.88□□□□□ -0.35
UBE3A-223ENST00000631247 IL15P40933 162 aaPredicted RBP12.88□□□□□ -0.35
UBE3A-223ENST00000631247 TAF1CQ15572 869 aaPredicted RBP12.88□□□□□ -0.35
UBE3A-223ENST00000631247 FKBP1CQ5VVH2 108 aa12.88□□□□□ -0.35
UBE3A-223ENST00000631247 HHIPL2Q6UWX4 724 aa12.88□□□□□ -0.35
UBE3A-223ENST00000631247 OTOP1Q7RTM1 612 aa12.88□□□□□ -0.35
UBE3A-223ENST00000631247 CD99L2Q8TCZ2 262 aa12.88□□□□□ -0.35
UBE3A-223ENST00000631247 MRIQ9BWK5 157 aa12.88□□□□□ -0.35
UBE3A-223ENST00000631247 RPAP1Q9BWH6 1393 aaPredicted RBP12.88□□□□□ -0.35
UBE3A-223ENST00000631247 TESPA1A2RU30 521 aaPredicted RBP12.87□□□□□ -0.35
UBE3A-223ENST00000631247 SPDYE5A6NIY4 337 aa12.87□□□□□ -0.35
UBE3A-223ENST00000631247 CCER2I3L3R5 266 aa12.87□□□□□ -0.35
UBE3A-223ENST00000631247 LDHBP07195 334 aaKnown RBP12.87□□□□□ -0.35
UBE3A-223ENST00000631247 SP3Q02447 781 aa12.87□□□□□ -0.35
UBE3A-223ENST00000631247 ARHGEF6Q15052 776 aa12.87□□□□□ -0.35
UBE3A-223ENST00000631247 LCE2DQ5TA82 110 aaPredicted RBP12.87□□□□□ -0.35
UBE3A-223ENST00000631247 APOBEC3HQ6NTF7 200 aaKnown RBP12.87□□□□□ -0.35
UBE3A-223ENST00000631247 ATG9AQ7Z3C6 839 aa12.87□□□□□ -0.35
UBE3A-223ENST00000631247 TRMT2AQ8IZ69 625 aaKnown RBP12.87□□□□□ -0.35
UBE3A-223ENST00000631247 BRI3BPQ8WY22 251 aa12.87□□□□□ -0.35
UBE3A-223ENST00000631247 PTPN18Q99952 460 aa12.87□□□□□ -0.35
UBE3A-223ENST00000631247 EFCC1Q9HA90 598 aa12.87□□□□□ -0.35
UBE3A-223ENST00000631247 ZFYVE28Q9HCC9 887 aa12.87□□□□□ -0.35
UBE3A-223ENST00000631247 SEMA3EO15041 775 aa12.86□□□□□ -0.35
UBE3A-223ENST00000631247 CETPP11597 493 aa12.86□□□□□ -0.35
UBE3A-223ENST00000631247 ERO1BQ86YB8 467 aa12.86□□□□□ -0.35
UBE3A-223ENST00000631247 ZGPATQ8N5A5 531 aaKnown RBP12.86□□□□□ -0.35
UBE3A-223ENST00000631247 ZKSCAN4Q969J2 545 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms