RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 TAF1DQ9H5J8 278 aaPredicted RBP10.06□□□□□ -0.8
MECP2-220ENST00000631210 MKRN1Q9UHC7 482 aaKnown RBP10.06□□□□□ -0.8
MECP2-220ENST00000631210 DDX60LQ5H9U9 1706 aaKnown RBP10.06□□□□□ -0.8
MECP2-220ENST00000631210 POLR2AP24928 1970 aaKnown RBP10.05□□□□□ -0.8
MECP2-220ENST00000631210 SGSM2O43147 1006 aa10.05□□□□□ -0.8
MECP2-220ENST00000631210 PRKAB2O43741 272 aa10.05□□□□□ -0.8
MECP2-220ENST00000631210 CDC45O75419 566 aa10.05□□□□□ -0.8
MECP2-220ENST00000631210 WDHD1O75717 1129 aaPredicted RBP10.05□□□□□ -0.8
MECP2-220ENST00000631210 MBD4O95243 580 aa10.05□□□□□ -0.8
MECP2-220ENST00000631210 LDHCP07864 332 aa10.05□□□□□ -0.8
MECP2-220ENST00000631210 POTEIP0CG38 1075 aa10.05□□□□□ -0.8
MECP2-220ENST00000631210 POTEJP0CG39 1038 aa10.05□□□□□ -0.8
MECP2-220ENST00000631210 GSTO1P78417 241 aa10.05□□□□□ -0.8
MECP2-220ENST00000631210 VPS53Q5VIR6 699 aa10.05□□□□□ -0.8
MECP2-220ENST00000631210 ZSCAN25Q6NSZ9 544 aa10.05□□□□□ -0.8
MECP2-220ENST00000631210 CWC27Q6UX04 472 aaKnown RBP10.05□□□□□ -0.8
MECP2-220ENST00000631210 SH3RF3Q8TEJ3 882 aaPredicted RBP10.05□□□□□ -0.8
MECP2-220ENST00000631210 ESYT1Q9BSJ8 1104 aa10.05□□□□□ -0.8
MECP2-220ENST00000631210 ARMT1Q9H993 441 aa10.05□□□□□ -0.8
MECP2-220ENST00000631210 NMRK2Q9NPI5 230 aa10.05□□□□□ -0.8
MECP2-220ENST00000631210 DDX4Q9NQI0 724 aaKnown RBP10.05□□□□□ -0.8
MECP2-220ENST00000631210 HELLSQ9NRZ9 838 aa10.05□□□□□ -0.8
MECP2-220ENST00000631210 ADARB2Q9NS39 739 aaKnown RBP10.05□□□□□ -0.8
MECP2-220ENST00000631210 AATFQ9NY61 560 aaKnown RBP eCLIP10.05□□□□□ -0.8
MECP2-220ENST00000631210 PGAP2Q9UHJ9 254 aa10.05□□□□□ -0.8
MECP2-220ENST00000631210 CNTNAP1P78357 1384 aa10.04□□□□□ -0.8
MECP2-220ENST00000631210 MAGEB6P1A0A0J9YX57 407 aa10.04□□□□□ -0.8
MECP2-220ENST00000631210 GSG1L2A8MUP6 293 aa10.04□□□□□ -0.8
MECP2-220ENST00000631210 GPAA1O43292 621 aa10.04□□□□□ -0.8
MECP2-220ENST00000631210 SEC24BO95487 1268 aa10.04□□□□□ -0.8
MECP2-220ENST00000631210 EPHX2P34913 555 aa10.04□□□□□ -0.8
MECP2-220ENST00000631210 CACNB3P54284 484 aa10.04□□□□□ -0.8
MECP2-220ENST00000631210 NFIAQ12857 509 aa10.04□□□□□ -0.8
MECP2-220ENST00000631210 KIF4BQ2VIQ3 1234 aa10.04□□□□□ -0.8
MECP2-220ENST00000631210 SPDYE2Q495Y8 402 aa10.04□□□□□ -0.8
MECP2-220ENST00000631210 MCMDC2Q4G0Z9 681 aa10.04□□□□□ -0.8
MECP2-220ENST00000631210 RBM26Q5T8P6 1007 aaKnown RBP10.04□□□□□ -0.8
MECP2-220ENST00000631210 ZFPM1Q8IX07 1006 aa10.04□□□□□ -0.8
MECP2-220ENST00000631210 OGFOD1Q8N543 542 aa10.04□□□□□ -0.8
MECP2-220ENST00000631210 TDRD3Q9H7E2 651 aaKnown RBP10.04□□□□□ -0.8
MECP2-220ENST00000631210 RRAGCQ9HB90 399 aa10.04□□□□□ -0.8
MECP2-220ENST00000631210 EPB41L4AQ9HCS5 686 aaPredicted RBP10.04□□□□□ -0.8
MECP2-220ENST00000631210 ZNF70Q9UC06 446 aaPredicted RBP10.04□□□□□ -0.8
MECP2-220ENST00000631210 FAM198AQ9UFP1 575 aa10.04□□□□□ -0.8
MECP2-220ENST00000631210 HACL1Q9UJ83 578 aa10.04□□□□□ -0.8
MECP2-220ENST00000631210 HDAC9Q9UKV0 1011 aa10.04□□□□□ -0.8
MECP2-220ENST00000631210 SIPA1L1O43166 1804 aa10.04□□□□□ -0.8
MECP2-220ENST00000631210 RPAP1Q9BWH6 1393 aaPredicted RBP10.03□□□□□ -0.8
MECP2-220ENST00000631210 H7C1D1 291 aa10.03□□□□□ -0.8
MECP2-220ENST00000631210 SMIM22K7EJ46 135 aa10.03□□□□□ -0.8
MECP2-220ENST00000631210 HIP1O00291 1037 aa10.03□□□□□ -0.8
MECP2-220ENST00000631210 PTH1RQ03431 593 aa10.03□□□□□ -0.8
MECP2-220ENST00000631210 EVX2Q03828 476 aa10.03□□□□□ -0.8
MECP2-220ENST00000631210 DLGAP5Q15398 846 aa10.03□□□□□ -0.8
MECP2-220ENST00000631210 SH3BP5LQ7L8J4 393 aa10.03□□□□□ -0.8
MECP2-220ENST00000631210 IDI2Q9BXS1 227 aa10.03□□□□□ -0.8
MECP2-220ENST00000631210 LSG1Q9H089 658 aaKnown RBP10.03□□□□□ -0.8
MECP2-220ENST00000631210 DIAPH3Q9NSV4 1193 aa10.03□□□□□ -0.8
MECP2-220ENST00000631210 USP40Q9NVE5 1235 aa10.03□□□□□ -0.8
MECP2-220ENST00000631210 BAZ2AQ9UIF9 1905 aaKnown RBP10.03□□□□□ -0.8
MECP2-220ENST00000631210 CCDC171Q6TFL3 1326 aa10.03□□□□□ -0.8
MECP2-220ENST00000631210 RAD50Q92878 1312 aa10.03□□□□□ -0.8
MECP2-220ENST00000631210 CLRN2A0PK11 232 aa10.02□□□□□ -0.81
MECP2-220ENST00000631210 KIF3CO14782 793 aa10.02□□□□□ -0.81
MECP2-220ENST00000631210 LRRFIP1Q32MZ4 808 aaKnown RBP10.02□□□□□ -0.81
MECP2-220ENST00000631210 DLK2Q6UY11 383 aa10.02□□□□□ -0.81
MECP2-220ENST00000631210 USP50Q70EL3 339 aaPredicted RBP10.02□□□□□ -0.81
MECP2-220ENST00000631210 CDAN1Q8IWY9 1227 aa10.02□□□□□ -0.81
MECP2-220ENST00000631210 SLF2Q8IX21 1173 aa10.02□□□□□ -0.81
MECP2-220ENST00000631210 SDR42E1Q8WUS8 393 aa10.02□□□□□ -0.81
MECP2-220ENST00000631210 SCAF8Q9UPN6 1271 aaKnown RBP10.02□□□□□ -0.81
MECP2-220ENST00000631210 TACC3Q9Y6A5 838 aa10.02□□□□□ -0.81
MECP2-220ENST00000631210 IQCA1LA6NCM1 817 aa10.01□□□□□ -0.81
MECP2-220ENST00000631210 NPM3O75607 178 aaKnown RBP10.01□□□□□ -0.81
MECP2-220ENST00000631210 SLURP2P0DP57 97 aa10.01□□□□□ -0.81
MECP2-220ENST00000631210 HSPD1P10809 573 aaKnown RBP10.01□□□□□ -0.81
MECP2-220ENST00000631210 VEGFAP15692 232 aaPredicted RBP10.01□□□□□ -0.81
MECP2-220ENST00000631210 LMOD1P29536 600 aaPredicted RBP10.01□□□□□ -0.81
MECP2-220ENST00000631210 RBM5P52756 815 aaKnown RBP eCLIP10.01□□□□□ -0.81
MECP2-220ENST00000631210 ANGEL2Q5VTE6 544 aaKnown RBP10.01□□□□□ -0.81
MECP2-220ENST00000631210 FKBP1CQ5VVH2 108 aa10.01□□□□□ -0.81
MECP2-220ENST00000631210 ZNF526Q8TF50 670 aaPredicted RBP10.01□□□□□ -0.81
MECP2-220ENST00000631210 AIDAQ96BJ3 306 aa10.01□□□□□ -0.81
MECP2-220ENST00000631210 TEPSINQ96N21 525 aa10.01□□□□□ -0.81
MECP2-220ENST00000631210 DCP1AQ9NPI6 582 aaPredicted RBP10.01□□□□□ -0.81
MECP2-220ENST00000631210 NAV1Q8NEY1 1877 aa10.01□□□□□ -0.81
MECP2-220ENST00000631210 MYH1P12882 1939 aa10.01□□□□□ -0.81
MECP2-220ENST00000631210 FLT1P17948 1338 aa10.01□□□□□ -0.81
MECP2-220ENST00000631210 ATRNL1Q5VV63 1379 aa10.01□□□□□ -0.81
MECP2-220ENST00000631210 COL2A1P02458 1487 aaPredicted RBP10□□□□□ -0.81
MECP2-220ENST00000631210 PATL2C9JE40 543 aaKnown RBP10□□□□□ -0.81
MECP2-220ENST00000631210 BAG3O95817 575 aa10□□□□□ -0.81
MECP2-220ENST00000631210 ALX1Q15699 326 aa10□□□□□ -0.81
MECP2-220ENST00000631210 TEX11Q8IYF3 940 aa10□□□□□ -0.81
MECP2-220ENST00000631210 IFNL3Q8IZI9 196 aa10□□□□□ -0.81
MECP2-220ENST00000631210 NKX2-3Q8TAU0 364 aa10□□□□□ -0.81
MECP2-220ENST00000631210 ZC3H15Q8WU90 426 aaKnown RBP10□□□□□ -0.81
MECP2-220ENST00000631210 TGFBRAP1Q8WUH2 860 aa10□□□□□ -0.81
MECP2-220ENST00000631210 MAP4K1Q92918 833 aa10□□□□□ -0.81
MECP2-220ENST00000631210 DSCC1Q9BVC3 393 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms