RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	SMC1B	Q8NDV3	1235 aa		31.48	■■■□□ 2.63
UBE3A-222	ENST00000630907	NOL10	Q9BSC4	688 aa	Known RBP	31.48	■■■□□ 2.63
UBE3A-222	ENST00000630907	FSD1	Q9BTV5	496 aa		31.48	■■■□□ 2.63
UBE3A-222	ENST00000630907	PITPNM2	Q9BZ72	1349 aa		31.48	■■■□□ 2.63
UBE3A-222	ENST00000630907	ZNF532	Q9HCE3	1301 aa		31.48	■■■□□ 2.63
UBE3A-222	ENST00000630907	LRRFIP1	Q32MZ4	808 aa	Known RBP	31.47	■■■□□ 2.63
UBE3A-222	ENST00000630907	TTC22	Q5TAA0	569 aa		31.47	■■■□□ 2.63
UBE3A-222	ENST00000630907	CNTROB	Q8N137	903 aa		31.47	■■■□□ 2.63
UBE3A-222	ENST00000630907	USP40	Q9NVE5	1235 aa		31.47	■■■□□ 2.63
UBE3A-222	ENST00000630907	BAG3	O95817	575 aa		31.46	■■■□□ 2.63
UBE3A-222	ENST00000630907	UBE3C	Q15386	1083 aa		31.46	■■■□□ 2.63
UBE3A-222	ENST00000630907	CDC42EP5	Q6NZY7	148 aa		31.46	■■■□□ 2.63
UBE3A-222	ENST00000630907	RILPL2	Q969X0	211 aa		31.46	■■■□□ 2.63
UBE3A-222	ENST00000630907	VEZT	Q9HBM0	779 aa		31.46	■■■□□ 2.63
UBE3A-222	ENST00000630907	TCRBV5S4A2T	A0A5A2	114 aa		31.45	■■■□□ 2.63
UBE3A-222	ENST00000630907	APOBEC3F	Q8IUX4	373 aa	Known RBP	31.45	■■■□□ 2.63
UBE3A-222	ENST00000630907	TMOD2	Q9NZR1	351 aa		31.45	■■■□□ 2.63
UBE3A-222	ENST00000630907	RNF113A	O15541	343 aa	Known RBP	31.44	■■■□□ 2.62
UBE3A-222	ENST00000630907	ZFY	P08048	801 aa	Predicted RBP	31.44	■■■□□ 2.62
UBE3A-222	ENST00000630907	RGS3	P49796	1198 aa		31.44	■■■□□ 2.62
UBE3A-222	ENST00000630907	PPP4C	P60510	307 aa		31.44	■■■□□ 2.62
UBE3A-222	ENST00000630907	CDC37L1	Q7L3B6	337 aa		31.44	■■■□□ 2.62
UBE3A-222	ENST00000630907	SULF1	Q8IWU6	871 aa		31.44	■■■□□ 2.62
UBE3A-222	ENST00000630907	AATF	Q9NY61	560 aa	Known RBP eCLIP	31.44	■■■□□ 2.62
UBE3A-222	ENST00000630907	GSPT1	P15170	499 aa	Known RBP	31.43	■■■□□ 2.62
UBE3A-222	ENST00000630907	KRT26	Q7Z3Y9	468 aa		31.43	■■■□□ 2.62
UBE3A-222	ENST00000630907	USP48	Q86UV5	1035 aa		31.43	■■■□□ 2.62
UBE3A-222	ENST00000630907	MIGA1	Q8NAN2	632 aa		31.43	■■■□□ 2.62
UBE3A-222	ENST00000630907	CHGB	P05060	677 aa		31.42	■■■□□ 2.62
UBE3A-222	ENST00000630907	FSTL1	Q12841	308 aa		31.42	■■■□□ 2.62
UBE3A-222	ENST00000630907	SLFNL1	Q499Z3	407 aa		31.42	■■■□□ 2.62
UBE3A-222	ENST00000630907	GLIS2	Q9BZE0	524 aa	Predicted RBP	31.42	■■■□□ 2.62
UBE3A-222	ENST00000630907	SCAF8	Q9UPN6	1271 aa	Known RBP	31.42	■■■□□ 2.62
UBE3A-222	ENST00000630907	PLCG2	P16885	1265 aa		31.41	■■■□□ 2.62
UBE3A-222	ENST00000630907	CACNB3	P54284	484 aa		31.41	■■■□□ 2.62
UBE3A-222	ENST00000630907	RHBDL3	P58872	404 aa		31.41	■■■□□ 2.62
UBE3A-222	ENST00000630907	TCP10L2	B9ZVM9	353 aa		31.4	■■■□□ 2.62
UBE3A-222	ENST00000630907	DYNLL1	P63167	89 aa	Known RBP	31.4	■■■□□ 2.62
UBE3A-222	ENST00000630907	TNFAIP1	Q13829	316 aa		31.4	■■■□□ 2.62
UBE3A-222	ENST00000630907	FKBP1C	Q5VVH2	108 aa		31.4	■■■□□ 2.62
UBE3A-222	ENST00000630907	TICAM2	Q86XR7	235 aa		31.4	■■■□□ 2.62
UBE3A-222	ENST00000630907	CERS3	Q8IU89	383 aa		31.4	■■■□□ 2.62
UBE3A-222	ENST00000630907	ECM29	Q5VYK3	1845 aa		31.4	■■■□□ 2.62
UBE3A-222	ENST00000630907	MAGEB6P1	A0A0J9YX57	407 aa		31.39	■■■□□ 2.62
UBE3A-222	ENST00000630907	ADM5	C9JUS6	153 aa		31.39	■■■□□ 2.62
UBE3A-222	ENST00000630907	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	31.39	■■■□□ 2.62
UBE3A-222	ENST00000630907	ITGBL1	O95965	494 aa	Predicted RBP	31.38	■■■□□ 2.61
UBE3A-222	ENST00000630907	SDS	P20132	328 aa		31.38	■■■□□ 2.61
UBE3A-222	ENST00000630907	TNNI2	P48788	182 aa		31.38	■■■□□ 2.61
UBE3A-222	ENST00000630907	TEX11	Q8IYF3	940 aa		31.38	■■■□□ 2.61
UBE3A-222	ENST00000630907	APPBP2	Q92624	585 aa		31.38	■■■□□ 2.61
UBE3A-222	ENST00000630907	GTF3C3	Q9Y5Q9	886 aa		31.38	■■■□□ 2.61
UBE3A-222	ENST00000630907	RIOK1	Q9BRS2	568 aa	Known RBP	31.37	■■■□□ 2.61
UBE3A-222	ENST00000630907	IDI2	Q9BXS1	227 aa		31.37	■■■□□ 2.61
UBE3A-222	ENST00000630907	DEFB129	Q9H1M3	183 aa		31.37	■■■□□ 2.61
UBE3A-222	ENST00000630907	RFX7	Q2KHR2	1363 aa		31.37	■■■□□ 2.61
UBE3A-222	ENST00000630907	MYH7	P12883	1935 aa		31.37	■■■□□ 2.61
UBE3A-222	ENST00000630907	WDHD1	O75717	1129 aa	Predicted RBP	31.36	■■■□□ 2.61
UBE3A-222	ENST00000630907	NFIA	Q12857	509 aa		31.36	■■■□□ 2.61
UBE3A-222	ENST00000630907	RASA3	Q14644	834 aa		31.36	■■■□□ 2.61
UBE3A-222	ENST00000630907	PUS7L	Q9H0K6	701 aa	Known RBP	31.36	■■■□□ 2.61
UBE3A-222	ENST00000630907	PPP2R3B	Q9Y5P8	575 aa		31.36	■■■□□ 2.61
UBE3A-222	ENST00000630907	POLR2A	P24928	1970 aa	Known RBP	31.36	■■■□□ 2.61
UBE3A-222	ENST00000630907	FAM83A	Q86UY5	434 aa		31.35	■■■□□ 2.61
UBE3A-222	ENST00000630907	OSBP2	Q969R2	916 aa		31.35	■■■□□ 2.61
UBE3A-222	ENST00000630907	TRAF5	O00463	557 aa		31.34	■■■□□ 2.61
UBE3A-222	ENST00000630907	MBD4	O95243	580 aa		31.34	■■■□□ 2.61
UBE3A-222	ENST00000630907	ZMYM1	Q5SVZ6	1142 aa		31.34	■■■□□ 2.61
UBE3A-222	ENST00000630907	DLK2	Q6UY11	383 aa		31.34	■■■□□ 2.61
UBE3A-222	ENST00000630907	AIDA	Q96BJ3	306 aa		31.34	■■■□□ 2.61
UBE3A-222	ENST00000630907	FAM198A	Q9UFP1	575 aa		31.34	■■■□□ 2.61
UBE3A-222	ENST00000630907	PICALM	Q13492	652 aa		31.33	■■■□□ 2.61
UBE3A-222	ENST00000630907	LCORL	Q8N3X6	602 aa		31.33	■■■□□ 2.61
UBE3A-222	ENST00000630907	FAM151A	Q8WW52	585 aa		31.33	■■■□□ 2.61
UBE3A-222	ENST00000630907	ARMT1	Q9H993	441 aa		31.33	■■■□□ 2.61
UBE3A-222	ENST00000630907	CNTNAP1	P78357	1384 aa		31.32	■■■□□ 2.6
UBE3A-222	ENST00000630907	ENTPD3	O75355	529 aa		31.32	■■■□□ 2.6
UBE3A-222	ENST00000630907	TCP10	Q12799	353 aa		31.32	■■■□□ 2.6
UBE3A-222	ENST00000630907	CDCA5	Q96FF9	252 aa		31.32	■■■□□ 2.6
UBE3A-222	ENST00000630907	PASK	Q96RG2	1323 aa		31.31	■■■□□ 2.6
UBE3A-222	ENST00000630907	HIP1	O00291	1037 aa		31.31	■■■□□ 2.6
UBE3A-222	ENST00000630907	NPM3	O75607	178 aa	Known RBP	31.31	■■■□□ 2.6
UBE3A-222	ENST00000630907	FMR1	Q06787	632 aa	Known RBP eCLIP	31.31	■■■□□ 2.6
UBE3A-222	ENST00000630907	BMP2KL	Q5H9B9	411 aa		31.31	■■■□□ 2.6
UBE3A-222	ENST00000630907	PRAMEF18	Q5VWM3	479 aa		31.31	■■■□□ 2.6
UBE3A-222	ENST00000630907	TGFBRAP1	Q8WUH2	860 aa		31.31	■■■□□ 2.6
UBE3A-222	ENST00000630907	CRNKL1	Q9BZJ0	848 aa	Known RBP	31.31	■■■□□ 2.6
UBE3A-222	ENST00000630907	TMEM39B	Q9GZU3	492 aa		31.31	■■■□□ 2.6
UBE3A-222	ENST00000630907	DDX4	Q9NQI0	724 aa	Known RBP	31.31	■■■□□ 2.6
UBE3A-222	ENST00000630907	SEC62	Q99442	399 aa	Known RBP	31.3	■■■□□ 2.6
UBE3A-222	ENST00000630907	HELLS	Q9NRZ9	838 aa		31.3	■■■□□ 2.6
UBE3A-222	ENST00000630907		M0R2C6	588 aa		31.29	■■■□□ 2.6
UBE3A-222	ENST00000630907	USP5	P45974	858 aa		31.29	■■■□□ 2.6
UBE3A-222	ENST00000630907	NMI	Q13287	307 aa	Predicted RBP	31.29	■■■□□ 2.6
UBE3A-222	ENST00000630907	DIAPH3	Q9NSV4	1193 aa		31.29	■■■□□ 2.6
UBE3A-222	ENST00000630907	MAPKAPK5	Q8IW41	473 aa		31.28	■■■□□ 2.6
UBE3A-222	ENST00000630907	ZFPM1	Q8IX07	1006 aa		31.28	■■■□□ 2.6
UBE3A-222	ENST00000630907	FAM227B	Q96M60	508 aa		31.28	■■■□□ 2.6
UBE3A-222	ENST00000630907	STRBP	Q96SI9	672 aa	Known RBP	31.28	■■■□□ 2.6
UBE3A-222	ENST00000630907	GPAA1	O43292	621 aa		31.27	■■■□□ 2.6

Retrieved 100 of 20,778 RNA–protein pairs in 339.3 ms