RNA–Protein interactions for RNA: ENST00000630813.1

CHD2-220, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2

Gene CHD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-220ENST00000630813 PRPF40AO75400 957 aaKnown RBP5.28□□□□□ -1.56
CHD2-220ENST00000630813 FMNL1O95466 1100 aaPredicted RBP5.28□□□□□ -1.56
CHD2-220ENST00000630813 STARD3NLO95772 234 aa5.28□□□□□ -1.56
CHD2-220ENST00000630813 CYP21A2P08686 494 aa5.28□□□□□ -1.56
CHD2-220ENST00000630813 SYT1P21579 422 aa5.28□□□□□ -1.56
CHD2-220ENST00000630813 FGFR2P21802 821 aa5.28□□□□□ -1.56
CHD2-220ENST00000630813 RPS6KB1P23443 525 aa5.28□□□□□ -1.56
CHD2-220ENST00000630813 IL6STP40189 918 aaPredicted RBP5.28□□□□□ -1.56
CHD2-220ENST00000630813 CRKLP46109 303 aaKnown RBP5.28□□□□□ -1.56
CHD2-220ENST00000630813 CTSWP56202 376 aa5.28□□□□□ -1.56
CHD2-220ENST00000630813 KCNQ4P56696 695 aa5.28□□□□□ -1.56
CHD2-220ENST00000630813 EXOSC10Q01780 885 aaKnown RBP5.28□□□□□ -1.56
CHD2-220ENST00000630813 KLHL40Q2TBA0 621 aa5.28□□□□□ -1.56
CHD2-220ENST00000630813 TTLL5Q6EMB2 1281 aa5.28□□□□□ -1.56
CHD2-220ENST00000630813 BARGINQ6ZT62 677 aa5.28□□□□□ -1.56
CHD2-220ENST00000630813 KIAA1211Q6ZU35 1233 aa5.28□□□□□ -1.56
CHD2-220ENST00000630813 AMIGO3Q86WK7 504 aa5.28□□□□□ -1.56
CHD2-220ENST00000630813 NUTM2AQ8IVF1 878 aaPredicted RBP5.28□□□□□ -1.56
CHD2-220ENST00000630813 CCDC83Q8IWF9 413 aa5.28□□□□□ -1.56
CHD2-220ENST00000630813 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.28□□□□□ -1.56
CHD2-220ENST00000630813 THAP11Q96EK4 314 aa5.28□□□□□ -1.56
CHD2-220ENST00000630813 NEUROD6Q96NK8 337 aa5.28□□□□□ -1.56
CHD2-220ENST00000630813 GDPD2Q9HCC8 539 aa5.28□□□□□ -1.56
CHD2-220ENST00000630813 PRDM9Q9NQV7 894 aa5.28□□□□□ -1.56
CHD2-220ENST00000630813 PAG1Q9NWQ8 432 aa5.28□□□□□ -1.56
CHD2-220ENST00000630813 TMEM63CQ9P1W3 806 aa5.28□□□□□ -1.56
CHD2-220ENST00000630813 MTMR6Q9Y217 621 aa5.28□□□□□ -1.56
CHD2-220ENST00000630813 TCHHQ07283 1943 aa5.28□□□□□ -1.56
CHD2-220ENST00000630813 DDX60Q8IY21 1712 aaKnown RBP5.28□□□□□ -1.56
CHD2-220ENST00000630813 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.27□□□□□ -1.57
CHD2-220ENST00000630813 LOC102724428A0A0B4J2F2 783 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 RNF113AO15541 343 aaKnown RBP5.27□□□□□ -1.57
CHD2-220ENST00000630813 NTSR2O95665 410 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 HCLS1P14317 486 aaPredicted RBP5.27□□□□□ -1.57
CHD2-220ENST00000630813 ITGA6P23229 1130 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 COL5A3P25940 1745 aaPredicted RBP5.27□□□□□ -1.57
CHD2-220ENST00000630813 MCAMP43121 646 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 ZAP70P43403 619 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 SIK1P57059 783 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 ZNF445P59923 1031 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 PIP4K2BP78356 416 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 TRIM32Q13049 653 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 PTGDRQ13258 359 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 DDB1Q16531 1140 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 ZSCAN23Q3MJ62 389 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 FOXD4L6Q3SYB3 417 aaPredicted RBP5.27□□□□□ -1.57
CHD2-220ENST00000630813 MCMDC2Q4G0Z9 681 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 FOXD4L3Q6VB84 417 aaPredicted RBP5.27□□□□□ -1.57
CHD2-220ENST00000630813 KIF6Q6ZMV9 814 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 DZIP3Q86Y13 1208 aaKnown RBP5.27□□□□□ -1.57
CHD2-220ENST00000630813 TMEM87AQ8NBN3 555 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 LINC00116Q8NCU8 138 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 SYTL4Q96C24 671 aaPredicted RBP5.27□□□□□ -1.57
CHD2-220ENST00000630813 REPIN1Q9BWE0 567 aaKnown RBP5.27□□□□□ -1.57
CHD2-220ENST00000630813 RBSNQ9H1K0 784 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 GRPEL1Q9HAV7 217 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 PIH1D3Q9NQM4 214 aaKnown RBP5.27□□□□□ -1.57
CHD2-220ENST00000630813 SEC31BQ9NQW1 1179 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 CCDC87Q9NVE4 849 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 CEP126Q9P2H0 1117 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 DENND2AQ9ULE3 1009 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 THRAP3Q9Y2W1 955 aaKnown RBP5.27□□□□□ -1.57
CHD2-220ENST00000630813 CYP46A1Q9Y6A2 500 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 TACC3Q9Y6A5 838 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 KAT6BQ8WYB5 2073 aa5.27□□□□□ -1.57
CHD2-220ENST00000630813 SPEF2Q9C093 1822 aa5.26□□□□□ -1.57
CHD2-220ENST00000630813 TCRBV5S4A2TA0A5A2 114 aa5.26□□□□□ -1.57
CHD2-220ENST00000630813 GOLGA6L3A6NEY3 463 aa5.26□□□□□ -1.57
CHD2-220ENST00000630813 PDE8AO60658 829 aa5.26□□□□□ -1.57
CHD2-220ENST00000630813 JAK2O60674 1132 aa5.26□□□□□ -1.57
CHD2-220ENST00000630813 CTDNEP1O95476 244 aa5.26□□□□□ -1.57
CHD2-220ENST00000630813 IFIT1P09914 478 aaKnown RBP5.26□□□□□ -1.57
CHD2-220ENST00000630813 ZSCAN22P10073 491 aaPredicted RBP5.26□□□□□ -1.57
CHD2-220ENST00000630813 HSPD1P10809 573 aaKnown RBP5.26□□□□□ -1.57
CHD2-220ENST00000630813 BMP1P13497 986 aa5.26□□□□□ -1.57
CHD2-220ENST00000630813 GJB2P29033 226 aa5.26□□□□□ -1.57
CHD2-220ENST00000630813 ATP6V1AP38606 617 aa5.26□□□□□ -1.57
CHD2-220ENST00000630813 PHKA1P46020 1223 aa5.26□□□□□ -1.57
CHD2-220ENST00000630813 GSK3AP49840 483 aa5.26□□□□□ -1.57
CHD2-220ENST00000630813 IFIT5Q13325 482 aaKnown RBP5.26□□□□□ -1.57
CHD2-220ENST00000630813 CCDC57Q2TAC2 916 aa5.26□□□□□ -1.57
CHD2-220ENST00000630813 SKOR2Q2VWA4 1001 aaPredicted RBP5.26□□□□□ -1.57
CHD2-220ENST00000630813 HSP90AB3PQ58FF7 597 aa5.26□□□□□ -1.57
CHD2-220ENST00000630813 MORN1Q5T089 497 aa5.26□□□□□ -1.57
CHD2-220ENST00000630813 USP48Q86UV5 1035 aa5.26□□□□□ -1.57
CHD2-220ENST00000630813 SLC51AQ86UW1 340 aa5.26□□□□□ -1.57
CHD2-220ENST00000630813 HELBQ8NG08 1087 aaPredicted RBP5.26□□□□□ -1.57
CHD2-220ENST00000630813 ARXQ96QS3 562 aa5.26□□□□□ -1.57
CHD2-220ENST00000630813 CDCA7Q9BWT1 371 aaPredicted RBP5.26□□□□□ -1.57
CHD2-220ENST00000630813 LRRC2Q9BYS8 371 aa5.26□□□□□ -1.57
CHD2-220ENST00000630813 AGXT2Q9BYV1 514 aa5.26□□□□□ -1.57
CHD2-220ENST00000630813 PUS7LQ9H0K6 701 aaKnown RBP5.26□□□□□ -1.57
CHD2-220ENST00000630813 RRAGDQ9NQL2 400 aaPredicted RBP5.26□□□□□ -1.57
CHD2-220ENST00000630813 HELLSQ9NRZ9 838 aa5.26□□□□□ -1.57
CHD2-220ENST00000630813 TRMT112Q9UI30 125 aaKnown RBP5.26□□□□□ -1.57
CHD2-220ENST00000630813 CNPY2Q9Y2B0 182 aa5.26□□□□□ -1.57
CHD2-220ENST00000630813 DDX49Q9Y6V7 483 aaKnown RBP5.26□□□□□ -1.57
CHD2-220ENST00000630813 MYH3P11055 1940 aa5.26□□□□□ -1.57
CHD2-220ENST00000630813 BCORQ6W2J9 1755 aa5.25□□□□□ -1.57
CHD2-220ENST00000630813 STX6O43752 255 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms