RNA–Protein interactions for RNA: ENST00000627515.2

ACAA1-220, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 5 BASIC

Gene ACAA1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-220ENST00000627515 IFFO2Q5TF58 517 aa29.4■■■□□ 2.3
ACAA1-220ENST00000627515 GAS2L3Q86XJ1 694 aa29.4■■■□□ 2.3
ACAA1-220ENST00000627515 NKX2-3Q8TAU0 364 aa29.4■■■□□ 2.3
ACAA1-220ENST00000627515 ZNF384Q8TF68 577 aa29.4■■■□□ 2.3
ACAA1-220ENST00000627515 MYH15Q9Y2K3 1946 aa29.4■■■□□ 2.3
ACAA1-220ENST00000627515 SH2B2O14492 632 aaPredicted RBP29.4■■■□□ 2.3
ACAA1-220ENST00000627515 NSUN4Q96CB9 384 aaKnown RBP29.4■■■□□ 2.3
ACAA1-220ENST00000627515 TMEM87BQ96K49 555 aa29.4■■■□□ 2.3
ACAA1-220ENST00000627515 TMEM63CQ9P1W3 806 aa29.4■■■□□ 2.3
ACAA1-220ENST00000627515 ANKRD31Q8N7Z5 1873 aa29.39■■■□□ 2.3
ACAA1-220ENST00000627515 STAG1Q8WVM7 1258 aa29.39■■■□□ 2.3
ACAA1-220ENST00000627515 AKT1S1Q96B36 256 aa29.39■■■□□ 2.3
ACAA1-220ENST00000627515 HPS5Q9UPZ3 1129 aa29.39■■■□□ 2.3
ACAA1-220ENST00000627515 DHX16O60231 1041 aaKnown RBP29.38■■■□□ 2.29
ACAA1-220ENST00000627515 MECOMQ03112 1051 aa29.38■■■□□ 2.29
ACAA1-220ENST00000627515 MFSD6Q6ZSS7 791 aa29.38■■■□□ 2.29
ACAA1-220ENST00000627515 SDR42E1Q8WUS8 393 aa29.38■■■□□ 2.29
ACAA1-220ENST00000627515 KRT23Q9C075 422 aa29.38■■■□□ 2.29
ACAA1-220ENST00000627515 GRPEL1Q9HAV7 217 aa29.38■■■□□ 2.29
ACAA1-220ENST00000627515 TNS1Q9HBL0 1735 aaKnown RBP29.38■■■□□ 2.29
ACAA1-220ENST00000627515 XRCC6P12956 609 aaKnown RBP eCLIP29.38■■■□□ 2.29
ACAA1-220ENST00000627515 RXRBP28702 533 aa29.38■■■□□ 2.29
ACAA1-220ENST00000627515 KRT85P78386 507 aa29.38■■■□□ 2.29
ACAA1-220ENST00000627515 NRXN2Q9P2S2 1712 aa29.37■■■□□ 2.29
ACAA1-220ENST00000627515 UBE2HP62256 183 aa29.37■■■□□ 2.29
ACAA1-220ENST00000627515 INCENPQ9NQS7 918 aa29.37■■■□□ 2.29
ACAA1-220ENST00000627515 HOXA10P31260 410 aaPredicted RBP29.36■■■□□ 2.29
ACAA1-220ENST00000627515 TMED8Q6PL24 325 aaPredicted RBP29.36■■■□□ 2.29
ACAA1-220ENST00000627515 TACC3Q9Y6A5 838 aa29.36■■■□□ 2.29
ACAA1-220ENST00000627515 LRRC37AA6NMS7 1700 aa29.36■■■□□ 2.29
ACAA1-220ENST00000627515 PRDX5P30044 214 aa29.36■■■□□ 2.29
ACAA1-220ENST00000627515 DYNLL1P63167 89 aaKnown RBP29.36■■■□□ 2.29
ACAA1-220ENST00000627515 GPSM2P81274 684 aa29.36■■■□□ 2.29
ACAA1-220ENST00000627515 C15orf52Q6ZUT6 534 aaKnown RBP29.36■■■□□ 2.29
ACAA1-220ENST00000627515 ZNF804AQ7Z570 1209 aa29.36■■■□□ 2.29
ACAA1-220ENST00000627515 SYAP1Q96A49 352 aaPredicted RBP29.36■■■□□ 2.29
ACAA1-220ENST00000627515 RGPD3A6NKT7 1758 aaPredicted RBP29.35■■■□□ 2.29
ACAA1-220ENST00000627515 RGPD4Q7Z3J3 1758 aa29.35■■■□□ 2.29
ACAA1-220ENST00000627515 KDM4AO75164 1064 aa29.35■■■□□ 2.29
ACAA1-220ENST00000627515 BBOX1O75936 387 aa29.35■■■□□ 2.29
ACAA1-220ENST00000627515 PPARAQ07869 468 aa29.35■■■□□ 2.29
ACAA1-220ENST00000627515 RNF41Q9H4P4 317 aaPredicted RBP29.35■■■□□ 2.29
ACAA1-220ENST00000627515 KLRG2A4D1S0 409 aaPredicted RBP29.34■■■□□ 2.29
ACAA1-220ENST00000627515 RESTQ13127 1097 aa29.34■■■□□ 2.29
ACAA1-220ENST00000627515 SPTY2D1Q68D10 685 aaPredicted RBP29.34■■■□□ 2.29
ACAA1-220ENST00000627515 COL23A1Q86Y22 540 aaPredicted RBP29.34■■■□□ 2.29
ACAA1-220ENST00000627515 NLGN1Q8N2Q7 840 aa29.34■■■□□ 2.29
ACAA1-220ENST00000627515 IGDCC4Q8TDY8 1250 aa29.34■■■□□ 2.29
ACAA1-220ENST00000627515 ZSCAN16Q9H4T2 348 aaPredicted RBP29.34■■■□□ 2.29
ACAA1-220ENST00000627515 ZSWIM5Q9P217 1185 aa29.34■■■□□ 2.29
ACAA1-220ENST00000627515 TMEM67Q5HYA8 995 aa29.34■■■□□ 2.29
ACAA1-220ENST00000627515 FAM173BQ6P4H8 233 aa29.34■■■□□ 2.29
ACAA1-220ENST00000627515 CRAMP1Q96RY5 1269 aa29.34■■■□□ 2.29
ACAA1-220ENST00000627515 BRIP1Q9BX63 1249 aa29.34■■■□□ 2.29
ACAA1-220ENST00000627515 LAMB1P07942 1786 aa29.33■■■□□ 2.29
ACAA1-220ENST00000627515 RAB11FIP4Q86YS3 637 aa29.33■■■□□ 2.29
ACAA1-220ENST00000627515 TDRD7Q8NHU6 1098 aaKnown RBP29.33■■■□□ 2.29
ACAA1-220ENST00000627515 LY9Q9HBG7 655 aa29.33■■■□□ 2.29
ACAA1-220ENST00000627515 ANAPC4Q9UJX5 808 aa29.33■■■□□ 2.29
ACAA1-220ENST00000627515 JAG2Q9Y219 1238 aa29.33■■■□□ 2.29
ACAA1-220ENST00000627515 CPLX1O14810 134 aa29.32■■■□□ 2.28
ACAA1-220ENST00000627515 UFL1O94874 794 aa29.32■■■□□ 2.28
ACAA1-220ENST00000627515 ATP2B4P23634 1241 aa29.32■■■□□ 2.28
ACAA1-220ENST00000627515 APOA5Q6Q788 366 aa29.32■■■□□ 2.28
ACAA1-220ENST00000627515 WDR66Q8TBY9 1149 aa29.32■■■□□ 2.28
ACAA1-220ENST00000627515 FDPSP14324 419 aaKnown RBP29.31■■■□□ 2.28
ACAA1-220ENST00000627515 LIFRP42702 1097 aa29.31■■■□□ 2.28
ACAA1-220ENST00000627515 RRP12Q5JTH9 1297 aaKnown RBP29.31■■■□□ 2.28
ACAA1-220ENST00000627515 GIMAP6Q6P9H5 292 aa29.31■■■□□ 2.28
ACAA1-220ENST00000627515 SGMS1Q86VZ5 419 aa29.31■■■□□ 2.28
ACAA1-220ENST00000627515 FLAD1Q8NFF5 587 aa29.31■■■□□ 2.28
ACAA1-220ENST00000627515 TOMM22Q9NS69 142 aa29.31■■■□□ 2.28
ACAA1-220ENST00000627515 GGA1Q9UJY5 639 aa29.31■■■□□ 2.28
ACAA1-220ENST00000627515 LTBP1Q14766 1721 aa29.31■■■□□ 2.28
ACAA1-220ENST00000627515 MINDY4BA8MYZ0 360 aa29.31■■■□□ 2.28
ACAA1-220ENST00000627515 PPFIA3O75145 1194 aa29.31■■■□□ 2.28
ACAA1-220ENST00000627515 FOSBP53539 338 aa29.31■■■□□ 2.28
ACAA1-220ENST00000627515 DZIP1Q86YF9 867 aaKnown RBP29.31■■■□□ 2.28
ACAA1-220ENST00000627515 GPR101Q96P66 508 aaPredicted RBP29.31■■■□□ 2.28
ACAA1-220ENST00000627515 MYH2Q9UKX2 1941 aa29.3■■■□□ 2.28
ACAA1-220ENST00000627515 DUOX1Q9NRD9 1551 aa29.3■■■□□ 2.28
ACAA1-220ENST00000627515 ELP1O95163 1332 aa29.3■■■□□ 2.28
ACAA1-220ENST00000627515 IFIT3O14879 490 aaKnown RBP29.3■■■□□ 2.28
ACAA1-220ENST00000627515 IGSF3O75054 1194 aa29.3■■■□□ 2.28
ACAA1-220ENST00000627515 METAP2P50579 478 aaKnown RBP eCLIP29.3■■■□□ 2.28
ACAA1-220ENST00000627515 NFXL1Q6ZNB6 911 aa29.3■■■□□ 2.28
ACAA1-220ENST00000627515 SCAND2PQ9GZW5 306 aaPredicted RBP29.3■■■□□ 2.28
ACAA1-220ENST00000627515 SENP2Q9HC62 589 aa29.3■■■□□ 2.28
ACAA1-220ENST00000627515 AATFQ9NY61 560 aaKnown RBP eCLIP29.29■■■□□ 2.28
ACAA1-220ENST00000627515 SART3Q15020 963 aaKnown RBP29.29■■■□□ 2.28
ACAA1-220ENST00000627515 TTC6Q86TZ1 520 aa29.29■■■□□ 2.28
ACAA1-220ENST00000627515 CRNKL1Q9BZJ0 848 aaKnown RBP29.29■■■□□ 2.28
ACAA1-220ENST00000627515 PODXL2Q9NZ53 605 aa29.29■■■□□ 2.28
ACAA1-220ENST00000627515 SYCE3A1L190 88 aa29.28■■■□□ 2.28
ACAA1-220ENST00000627515 TMC4Q7Z404 712 aa29.28■■■□□ 2.28
ACAA1-220ENST00000627515 STK11IPQ8N1F8 1099 aa29.28■■■□□ 2.28
ACAA1-220ENST00000627515 MTA3Q9BTC8 594 aa29.28■■■□□ 2.28
ACAA1-220ENST00000627515 ECM29Q5VYK3 1845 aa29.28■■■□□ 2.28
ACAA1-220ENST00000627515 ZBTB43O43298 467 aa29.27■■■□□ 2.28
ACAA1-220ENST00000627515 LDHBP07195 334 aaKnown RBP29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms