RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 PTPN11Q06124 597 aaPredicted RBP6.47□□□□□ -1.37
CDR1-202ENST00000625883 KCNMA1Q12791 1236 aa6.47□□□□□ -1.37
CDR1-202ENST00000625883 LRRC14Q15048 493 aa6.47□□□□□ -1.37
CDR1-202ENST00000625883 CCDC84Q86UT8 332 aaPredicted RBP6.47□□□□□ -1.37
CDR1-202ENST00000625883 MCF2L2Q86YR7 1114 aa6.47□□□□□ -1.37
CDR1-202ENST00000625883 DDX54Q8TDD1 881 aaKnown RBP6.47□□□□□ -1.37
CDR1-202ENST00000625883 MIR1-1HGQ9H1L0 117 aa6.47□□□□□ -1.37
CDR1-202ENST00000625883 ARL4DP49703 201 aa6.47□□□□□ -1.37
CDR1-202ENST00000625883 KLHL23Q8NBE8 558 aa6.47□□□□□ -1.37
CDR1-202ENST00000625883 FBXO27Q8NI29 283 aa6.47□□□□□ -1.37
CDR1-202ENST00000625883 GATAD2BQ8WXI9 593 aa6.47□□□□□ -1.37
CDR1-202ENST00000625883 PPP1R1BQ9UD71 204 aaPredicted RBP6.47□□□□□ -1.37
CDR1-202ENST00000625883 ADAM11O75078 769 aa6.46□□□□□ -1.38
CDR1-202ENST00000625883 TRIM37O94972 964 aa6.46□□□□□ -1.38
CDR1-202ENST00000625883 SELPP16109 830 aa6.46□□□□□ -1.38
CDR1-202ENST00000625883 MAOBP27338 520 aa6.46□□□□□ -1.38
CDR1-202ENST00000625883 APOBRQ0VD83 1088 aa6.46□□□□□ -1.38
CDR1-202ENST00000625883 POU4F3Q15319 338 aa6.46□□□□□ -1.38
CDR1-202ENST00000625883 FOXD4L6Q3SYB3 417 aaPredicted RBP6.46□□□□□ -1.38
CDR1-202ENST00000625883 MAP1SQ66K74 1059 aaPredicted RBP6.46□□□□□ -1.38
CDR1-202ENST00000625883 FOXD4L3Q6VB84 417 aaPredicted RBP6.46□□□□□ -1.38
CDR1-202ENST00000625883 JARID2Q92833 1246 aaPredicted RBP6.46□□□□□ -1.38
CDR1-202ENST00000625883 TRIM11Q96F44 468 aa6.46□□□□□ -1.38
CDR1-202ENST00000625883 LRRC3Q9BY71 257 aa6.46□□□□□ -1.38
CDR1-202ENST00000625883 ZC3H12CQ9C0D7 883 aaKnown RBP6.46□□□□□ -1.38
CDR1-202ENST00000625883 GINM1Q9NU53 330 aa6.46□□□□□ -1.38
CDR1-202ENST00000625883 TLR3O15455 904 aaKnown RBP6.45□□□□□ -1.38
CDR1-202ENST00000625883 DDX3YO15523 660 aaKnown RBP6.45□□□□□ -1.38
CDR1-202ENST00000625883 CILPO75339 1184 aa6.45□□□□□ -1.38
CDR1-202ENST00000625883 CYP11A1P05108 521 aa6.45□□□□□ -1.38
CDR1-202ENST00000625883 LMNB1P20700 586 aa6.45□□□□□ -1.38
CDR1-202ENST00000625883 NLRP12P59046 1061 aa6.45□□□□□ -1.38
CDR1-202ENST00000625883 SNRPNP63162 240 aaKnown RBP6.45□□□□□ -1.38
CDR1-202ENST00000625883 SUZ12Q15022 739 aaKnown RBP6.45□□□□□ -1.38
CDR1-202ENST00000625883 SCARA3Q6AZY7 606 aa6.45□□□□□ -1.38
CDR1-202ENST00000625883 LINC00114Q6XXX2 140 aa6.45□□□□□ -1.38
CDR1-202ENST00000625883 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.45□□□□□ -1.38
CDR1-202ENST00000625883 VPS37DQ86XT2 251 aa6.45□□□□□ -1.38
CDR1-202ENST00000625883 MAP4K3Q8IVH8 894 aa6.45□□□□□ -1.38
CDR1-202ENST00000625883 SLITRK4Q8IW52 837 aa6.45□□□□□ -1.38
CDR1-202ENST00000625883 UBXN4Q92575 508 aa6.45□□□□□ -1.38
CDR1-202ENST00000625883 KCNB2Q92953 911 aa6.45□□□□□ -1.38
CDR1-202ENST00000625883 SEC16BQ96JE7 1060 aa6.45□□□□□ -1.38
CDR1-202ENST00000625883 SPATA32Q96LK8 384 aa6.45□□□□□ -1.38
CDR1-202ENST00000625883 CCDC86Q9H6F5 360 aaKnown RBP6.45□□□□□ -1.38
CDR1-202ENST00000625883 KCNK4Q9NYG8 393 aa6.45□□□□□ -1.38
CDR1-202ENST00000625883 EFR3BQ9Y2G0 817 aa6.45□□□□□ -1.38
CDR1-202ENST00000625883 ROBO2Q9HCK4 1378 aa6.44□□□□□ -1.38
CDR1-202ENST00000625883 LOC100289279A0A1B0GTE1 492 aa6.44□□□□□ -1.38
CDR1-202ENST00000625883 EIF4EBP3O60516 100 aaPredicted RBP6.44□□□□□ -1.38
CDR1-202ENST00000625883 SOX9P48436 509 aa6.44□□□□□ -1.38
CDR1-202ENST00000625883 NASPP49321 788 aaPredicted RBP6.44□□□□□ -1.38
CDR1-202ENST00000625883 MPP2Q14168 576 aa6.44□□□□□ -1.38
CDR1-202ENST00000625883 TMEM151AQ8N4L1 468 aa6.44□□□□□ -1.38
CDR1-202ENST00000625883 DTWD1Q8N5C7 304 aa6.44□□□□□ -1.38
CDR1-202ENST00000625883 GPBAR1Q8TDU6 330 aa6.44□□□□□ -1.38
CDR1-202ENST00000625883 DHX38Q92620 1227 aaKnown RBP6.44□□□□□ -1.38
CDR1-202ENST00000625883 NKD1Q969G9 470 aa6.44□□□□□ -1.38
CDR1-202ENST00000625883 CORO1BQ9BR76 489 aa6.44□□□□□ -1.38
CDR1-202ENST00000625883 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.44□□□□□ -1.38
CDR1-202ENST00000625883 CNTNAP5Q8WYK1 1306 aa6.44□□□□□ -1.38
CDR1-202ENST00000625883 ZNF862O60290 1169 aa6.43□□□□□ -1.38
CDR1-202ENST00000625883 DLGAP3O95886 979 aa6.43□□□□□ -1.38
CDR1-202ENST00000625883 ATP2B1P20020 1258 aa6.43□□□□□ -1.38
CDR1-202ENST00000625883 CD68P34810 354 aaPredicted RBP6.43□□□□□ -1.38
CDR1-202ENST00000625883 CDK8P49336 464 aa6.43□□□□□ -1.38
CDR1-202ENST00000625883 RASSF7Q02833 373 aa6.43□□□□□ -1.38
CDR1-202ENST00000625883 TRAPPC3LQ5T215 181 aa6.43□□□□□ -1.38
CDR1-202ENST00000625883 FMR1NBQ8N0W7 255 aaPredicted RBP6.43□□□□□ -1.38
CDR1-202ENST00000625883 WDR89Q96FK6 387 aaPredicted RBP6.43□□□□□ -1.38
CDR1-202ENST00000625883 KRT82Q9NSB4 513 aa6.43□□□□□ -1.38
CDR1-202ENST00000625883 A0A0A0MRY4 1105 aa6.42□□□□□ -1.38
CDR1-202ENST00000625883 LOC100996750A0A140TA64 210 aa6.42□□□□□ -1.38
CDR1-202ENST00000625883 DLL1O00548 723 aa6.42□□□□□ -1.38
CDR1-202ENST00000625883 GDF11O95390 407 aa6.42□□□□□ -1.38
CDR1-202ENST00000625883 GTF2F1P35269 517 aaKnown RBP eCLIP6.42□□□□□ -1.38
CDR1-202ENST00000625883 COL9A2Q14055 689 aaPredicted RBP6.42□□□□□ -1.38
CDR1-202ENST00000625883 SEZ6Q53EL9 994 aa6.42□□□□□ -1.38
CDR1-202ENST00000625883 REC114Q7Z4M0 266 aa6.42□□□□□ -1.38
CDR1-202ENST00000625883 ARMC5Q96C12 935 aa6.42□□□□□ -1.38
CDR1-202ENST00000625883 USP26Q9BXU7 913 aa6.42□□□□□ -1.38
CDR1-202ENST00000625883 KRTAP4-6Q9BYQ5 205 aa6.42□□□□□ -1.38
CDR1-202ENST00000625883 LOC105371045A0A1W2PR82 267 aa6.41□□□□□ -1.38
CDR1-202ENST00000625883 RPL6Q02878 288 aaKnown RBP6.41□□□□□ -1.38
CDR1-202ENST00000625883 FBXO11Q86XK2 927 aa6.41□□□□□ -1.38
CDR1-202ENST00000625883 UBASH3BQ8TF42 649 aa6.41□□□□□ -1.38
CDR1-202ENST00000625883 PLVAPQ9BX97 442 aa6.41□□□□□ -1.38
CDR1-202ENST00000625883 POLR3KQ9Y2Y1 108 aaPredicted RBP6.41□□□□□ -1.38
CDR1-202ENST00000625883 WISP1O95388 367 aa6.41□□□□□ -1.38
CDR1-202ENST00000625883 LIG1P18858 919 aa6.41□□□□□ -1.38
CDR1-202ENST00000625883 PDE3AQ14432 1141 aa6.41□□□□□ -1.38
CDR1-202ENST00000625883 INPP5AQ14642 412 aa6.41□□□□□ -1.38
CDR1-202ENST00000625883 CWF19L2Q2TBE0 894 aaKnown RBP6.41□□□□□ -1.38
CDR1-202ENST00000625883 PRRT3Q5FWE3 981 aa6.41□□□□□ -1.38
CDR1-202ENST00000625883 DNAJC2Q99543 621 aaKnown RBP6.41□□□□□ -1.38
CDR1-202ENST00000625883 BRMS1Q9HCU9 246 aa6.41□□□□□ -1.38
CDR1-202ENST00000625883 PPT2Q9UMR5 302 aa6.41□□□□□ -1.38
CDR1-202ENST00000625883 PCDHA4Q9UN74 947 aa6.41□□□□□ -1.38
CDR1-202ENST00000625883 PCDHGC5Q9Y5F6 944 aa6.41□□□□□ -1.38
CDR1-202ENST00000625883 GFRA2O00451 464 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms