RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 HOXB3P14651 431 aaPredicted RBP8.78□□□□□ -1
CDKL5-204ENST00000623364 ATN1P54259 1190 aaPredicted RBP8.78□□□□□ -1
CDKL5-204ENST00000623364 RTP1P59025 263 aa8.78□□□□□ -1
CDKL5-204ENST00000623364 MAP3K9P80192 1104 aa8.78□□□□□ -1
CDKL5-204ENST00000623364 IER5LQ5T953 404 aa8.78□□□□□ -1
CDKL5-204ENST00000623364 PARK7Q99497 189 aaKnown RBP8.78□□□□□ -1
CDKL5-204ENST00000623364 PBX4Q9BYU1 374 aa8.78□□□□□ -1
CDKL5-204ENST00000623364 ATP11BQ9Y2G3 1177 aa8.78□□□□□ -1
CDKL5-204ENST00000623364 ZNF804BA4D1E1 1349 aa8.78□□□□□ -1
CDKL5-204ENST00000623364 DNAH12Q6ZR08 3092 aa8.77□□□□□ -1
CDKL5-204ENST00000623364 PRRC2BQ5JSZ5 2229 aaKnown RBP8.77□□□□□ -1.01
CDKL5-204ENST00000623364 PROB1E7EW31 1015 aa8.77□□□□□ -1.01
CDKL5-204ENST00000623364 PBX2P40425 430 aa8.77□□□□□ -1.01
CDKL5-204ENST00000623364 TEFQ10587 303 aa8.77□□□□□ -1.01
CDKL5-204ENST00000623364 PKN1Q16512 942 aa8.77□□□□□ -1.01
CDKL5-204ENST00000623364 SULT6B1Q6IMI4 303 aa8.77□□□□□ -1.01
CDKL5-204ENST00000623364 ASCL5Q7RTU5 278 aa8.77□□□□□ -1.01
CDKL5-204ENST00000623364 ERO1BQ86YB8 467 aa8.77□□□□□ -1.01
CDKL5-204ENST00000623364 FAM178BQ8IXR5 827 aa8.77□□□□□ -1.01
CDKL5-204ENST00000623364 MSRAQ9UJ68 235 aa8.77□□□□□ -1.01
CDKL5-204ENST00000623364 NUP98P52948 1817 aa8.77□□□□□ -1.01
CDKL5-204ENST00000623364 PLXNA1Q9UIW2 1896 aa8.77□□□□□ -1.01
CDKL5-204ENST00000623364 ASH1LQ9NR48 2969 aaKnown RBP8.76□□□□□ -1.01
CDKL5-204ENST00000623364 REV3LO60673 3130 aa8.76□□□□□ -1.01
CDKL5-204ENST00000623364 ANKRD36CQ5JPF3 1778 aa8.76□□□□□ -1.01
CDKL5-204ENST00000623364 POTEB3A0JP26 581 aa8.76□□□□□ -1.01
CDKL5-204ENST00000623364 IRF6O14896 467 aa8.76□□□□□ -1.01
CDKL5-204ENST00000623364 MYO1BO43795 1136 aa8.76□□□□□ -1.01
CDKL5-204ENST00000623364 GTPBP6O43824 516 aaPredicted RBP8.76□□□□□ -1.01
CDKL5-204ENST00000623364 UFL1O94874 794 aa8.76□□□□□ -1.01
CDKL5-204ENST00000623364 PARP10Q53GL7 1025 aa8.76□□□□□ -1.01
CDKL5-204ENST00000623364 POTEBQ6S5H4 581 aa8.76□□□□□ -1.01
CDKL5-204ENST00000623364 UTP14AQ9BVJ6 771 aaKnown RBP8.76□□□□□ -1.01
CDKL5-204ENST00000623364 SLC28A3Q9HAS3 691 aa8.76□□□□□ -1.01
CDKL5-204ENST00000623364 MAP3K15Q6ZN16 1313 aa8.76□□□□□ -1.01
CDKL5-204ENST00000623364 PRR23AA6NEV1 266 aa8.75□□□□□ -1.01
CDKL5-204ENST00000623364 TRIM32Q13049 653 aa8.75□□□□□ -1.01
CDKL5-204ENST00000623364 DLGAP5Q15398 846 aa8.75□□□□□ -1.01
CDKL5-204ENST00000623364 RAB30Q15771 203 aa8.75□□□□□ -1.01
CDKL5-204ENST00000623364 KIF6Q6ZMV9 814 aa8.75□□□□□ -1.01
CDKL5-204ENST00000623364 ZNF34Q8IZ26 560 aa8.75□□□□□ -1.01
CDKL5-204ENST00000623364 FBXW7Q969H0 707 aa8.75□□□□□ -1.01
CDKL5-204ENST00000623364 ZBED3Q96IU2 234 aaPredicted RBP8.75□□□□□ -1.01
CDKL5-204ENST00000623364 CHD9Q3L8U1 2897 aa8.75□□□□□ -1.01
CDKL5-204ENST00000623364 EPHB4P54760 987 aa8.74□□□□□ -1.01
CDKL5-204ENST00000623364 EVX2Q03828 476 aa8.74□□□□□ -1.01
CDKL5-204ENST00000623364 PPIL2Q13356 520 aa8.74□□□□□ -1.01
CDKL5-204ENST00000623364 DACT2Q5SW24 774 aa8.74□□□□□ -1.01
CDKL5-204ENST00000623364 RMDN1Q96DB5 314 aa8.74□□□□□ -1.01
CDKL5-204ENST00000623364 MXD3Q9BW11 206 aa8.74□□□□□ -1.01
CDKL5-204ENST00000623364 ANKIB1Q9P2G1 1089 aa8.74□□□□□ -1.01
CDKL5-204ENST00000623364 GGA1Q9UJY5 639 aa8.74□□□□□ -1.01
CDKL5-204ENST00000623364 DOCK3Q8IZD9 2030 aa8.74□□□□□ -1.01
CDKL5-204ENST00000623364 COL4A6Q14031 1691 aa8.73□□□□□ -1.01
CDKL5-204ENST00000623364 BRWD1Q9NSI6 2320 aa8.73□□□□□ -1.01
CDKL5-204ENST00000623364 SNRPA1P09661 255 aaKnown RBP8.73□□□□□ -1.01
CDKL5-204ENST00000623364 PRKAR2AP13861 404 aaKnown RBP8.73□□□□□ -1.01
CDKL5-204ENST00000623364 HCLS1P14317 486 aaPredicted RBP8.73□□□□□ -1.01
CDKL5-204ENST00000623364 FPGSQ05932 587 aa8.73□□□□□ -1.01
CDKL5-204ENST00000623364 RASA3Q14644 834 aa8.73□□□□□ -1.01
CDKL5-204ENST00000623364 SUGP1Q8IWZ8 645 aaKnown RBP8.73□□□□□ -1.01
CDKL5-204ENST00000623364 NGEFQ8N5V2 710 aa8.73□□□□□ -1.01
CDKL5-204ENST00000623364 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.73□□□□□ -1.01
CDKL5-204ENST00000623364 VEZTQ9HBM0 779 aa8.73□□□□□ -1.01
CDKL5-204ENST00000623364 A0A0G2JMZ2 1700 aa8.73□□□□□ -1.01
CDKL5-204ENST00000623364 PLXNA3P51805 1871 aa8.72□□□□□ -1.01
CDKL5-204ENST00000623364 SPTBN2O15020 2390 aa8.72□□□□□ -1.01
CDKL5-204ENST00000623364 TRIM43BA6NCK2 446 aa8.72□□□□□ -1.01
CDKL5-204ENST00000623364 SOBPA7XYQ1 873 aa8.72□□□□□ -1.01
CDKL5-204ENST00000623364 GRXCR1A8MXD5 290 aa8.72□□□□□ -1.01
CDKL5-204ENST00000623364 CYP2C8P10632 490 aa8.72□□□□□ -1.01
CDKL5-204ENST00000623364 PUM1Q14671 1186 aaKnown RBP eCLIP8.72□□□□□ -1.01
CDKL5-204ENST00000623364 STRIP1Q5VSL9 837 aa8.72□□□□□ -1.01
CDKL5-204ENST00000623364 KIAA0825Q8IV33 1275 aa8.72□□□□□ -1.01
CDKL5-204ENST00000623364 ADSSL1Q8N142 457 aa8.72□□□□□ -1.01
CDKL5-204ENST00000623364 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.72□□□□□ -1.01
CDKL5-204ENST00000623364 TRIM43Q96BQ3 446 aaPredicted RBP8.72□□□□□ -1.01
CDKL5-204ENST00000623364 PDLIM7Q9NR12 457 aa8.72□□□□□ -1.01
CDKL5-204ENST00000623364 PODXL2Q9NZ53 605 aa8.72□□□□□ -1.01
CDKL5-204ENST00000623364 GCN1Q92616 2671 aaKnown RBP8.71□□□□□ -1.01
CDKL5-204ENST00000623364 CLRN2A0PK11 232 aa8.71□□□□□ -1.02
CDKL5-204ENST00000623364 SPDYE2BA6NHP3 402 aa8.71□□□□□ -1.02
CDKL5-204ENST00000623364 SPDYE6P0CI01 402 aa8.71□□□□□ -1.02
CDKL5-204ENST00000623364 POU3F3P20264 500 aaPredicted RBP8.71□□□□□ -1.02
CDKL5-204ENST00000623364 SPDYE2Q495Y8 402 aa8.71□□□□□ -1.02
CDKL5-204ENST00000623364 MAP3K21Q5TCX8 1036 aa8.71□□□□□ -1.02
CDKL5-204ENST00000623364 LHX8Q68G74 356 aa8.71□□□□□ -1.02
CDKL5-204ENST00000623364 CELF1Q92879 486 aaKnown RBP8.71□□□□□ -1.02
CDKL5-204ENST00000623364 NKX2-4Q9H2Z4 354 aa8.71□□□□□ -1.02
CDKL5-204ENST00000623364 ZBTB3Q9H5J0 574 aa8.71□□□□□ -1.02
CDKL5-204ENST00000623364 JAG2Q9Y219 1238 aa8.71□□□□□ -1.02
CDKL5-204ENST00000623364 MTCH2Q9Y6C9 303 aa8.71□□□□□ -1.02
CDKL5-204ENST00000623364 ZFYVE26Q68DK2 2539 aa8.71□□□□□ -1.02
CDKL5-204ENST00000623364 TNFAIP1Q13829 316 aa8.7□□□□□ -1.02
CDKL5-204ENST00000623364 CCDC174Q6PII3 467 aa8.7□□□□□ -1.02
CDKL5-204ENST00000623364 BMP8AQ7Z5Y6 402 aa8.7□□□□□ -1.02
CDKL5-204ENST00000623364 SH3RF1Q7Z6J0 888 aa8.7□□□□□ -1.02
CDKL5-204ENST00000623364 PBXIP1Q96AQ6 731 aa8.7□□□□□ -1.02
CDKL5-204ENST00000623364 CHAMP1Q96JM3 812 aa8.7□□□□□ -1.02
CDKL5-204ENST00000623364 FSD1Q9BTV5 496 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms