RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 RAB6AP20340 208 aa8.17□□□□□ -1.1
BRCA1-229ENST00000621897 PPP2R3AQ06190 1150 aa8.17□□□□□ -1.1
BRCA1-229ENST00000621897 TPTE2Q6XPS3 522 aa8.17□□□□□ -1.1
BRCA1-229ENST00000621897 SULF2Q8IWU5 870 aa8.17□□□□□ -1.1
BRCA1-229ENST00000621897 EZH1Q92800 747 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-229ENST00000621897 SRCIN1Q9C0H9 1055 aa8.17□□□□□ -1.1
BRCA1-229ENST00000621897 GSX1Q9H4S2 264 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-229ENST00000621897 C12orf49Q9H741 205 aa8.17□□□□□ -1.1
BRCA1-229ENST00000621897 PRR19A6NJB7 356 aa8.16□□□□□ -1.1
BRCA1-229ENST00000621897 ENC1O14682 589 aa8.16□□□□□ -1.1
BRCA1-229ENST00000621897 TMPRSS2O15393 492 aa8.16□□□□□ -1.1
BRCA1-229ENST00000621897 SSTR4P31391 388 aa8.16□□□□□ -1.1
BRCA1-229ENST00000621897 NFKBIBQ15653 356 aa8.16□□□□□ -1.1
BRCA1-229ENST00000621897 NECAB3Q96P71 396 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-229ENST00000621897 SPG7Q9UQ90 795 aa8.16□□□□□ -1.1
BRCA1-229ENST00000621897 PCDHGC5Q9Y5F6 944 aa8.16□□□□□ -1.1
BRCA1-229ENST00000621897 WDR64B1ANS9 1081 aa8.15□□□□□ -1.1
BRCA1-229ENST00000621897 PAGE1O75459 146 aa8.15□□□□□ -1.1
BRCA1-229ENST00000621897 F13BP05160 661 aa8.15□□□□□ -1.1
BRCA1-229ENST00000621897 NFICP08651 508 aa8.15□□□□□ -1.1
BRCA1-229ENST00000621897 ASPAP45381 313 aa8.15□□□□□ -1.1
BRCA1-229ENST00000621897 DNAJC14Q6Y2X3 702 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-229ENST00000621897 FBXL6Q8N531 539 aa8.15□□□□□ -1.1
BRCA1-229ENST00000621897 KCNB2Q92953 911 aa8.15□□□□□ -1.1
BRCA1-229ENST00000621897 ACSS3Q9H6R3 686 aa8.15□□□□□ -1.1
BRCA1-229ENST00000621897 KRT82Q9NSB4 513 aa8.15□□□□□ -1.1
BRCA1-229ENST00000621897 SYNGAP1Q96PV0 1343 aa8.14□□□□□ -1.11
BRCA1-229ENST00000621897 GIPC1O14908 333 aa8.14□□□□□ -1.11
BRCA1-229ENST00000621897 USP17L7P0C7H9 530 aa8.14□□□□□ -1.11
BRCA1-229ENST00000621897 NME2P22392 152 aa8.14□□□□□ -1.11
BRCA1-229ENST00000621897 ARNTP27540 789 aa8.14□□□□□ -1.11
BRCA1-229ENST00000621897 ADMP35318 185 aa8.14□□□□□ -1.11
BRCA1-229ENST00000621897 CD97P48960 835 aa8.14□□□□□ -1.11
BRCA1-229ENST00000621897 KIF4BQ2VIQ3 1234 aa8.14□□□□□ -1.11
BRCA1-229ENST00000621897 PAOXQ6QHF9 649 aa8.14□□□□□ -1.11
BRCA1-229ENST00000621897 MPRIPQ6WCQ1 1025 aa8.14□□□□□ -1.11
BRCA1-229ENST00000621897 NPAS4Q8IUM7 802 aa8.14□□□□□ -1.11
BRCA1-229ENST00000621897 SEMA6CQ9H3T2 930 aa8.14□□□□□ -1.11
BRCA1-229ENST00000621897 CRIM1Q9NZV1 1036 aa8.14□□□□□ -1.11
BRCA1-229ENST00000621897 PPM1HQ9ULR3 514 aa8.14□□□□□ -1.11
BRCA1-229ENST00000621897 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-229ENST00000621897 PRPF40AO75400 957 aaKnown RBP8.13□□□□□ -1.11
BRCA1-229ENST00000621897 BMP6P22004 513 aa8.13□□□□□ -1.11
BRCA1-229ENST00000621897 ZNF252P-AS1Q0IIN9 211 aa8.13□□□□□ -1.11
BRCA1-229ENST00000621897 RASIP1Q5U651 963 aa8.13□□□□□ -1.11
BRCA1-229ENST00000621897 GRIN3AQ8TCU5 1115 aa8.13□□□□□ -1.11
BRCA1-229ENST00000621897 GATA6Q92908 595 aa8.13□□□□□ -1.11
BRCA1-229ENST00000621897 YIPF2Q9BWQ6 316 aa8.13□□□□□ -1.11
BRCA1-229ENST00000621897 FAM8A1Q9UBU6 413 aa8.13□□□□□ -1.11
BRCA1-229ENST00000621897 PRKAG2Q9UGJ0 569 aa8.13□□□□□ -1.11
BRCA1-229ENST00000621897 DYNC1LI2O43237 492 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-229ENST00000621897 CELA3AP09093 270 aa8.12□□□□□ -1.11
BRCA1-229ENST00000621897 GNA15P30679 374 aa8.12□□□□□ -1.11
BRCA1-229ENST00000621897 COL19A1Q14993 1142 aa8.12□□□□□ -1.11
BRCA1-229ENST00000621897 EAPPQ56P03 285 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-229ENST00000621897 MAP1SQ66K74 1059 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-229ENST00000621897 GPBAR1Q8TDU6 330 aa8.12□□□□□ -1.11
BRCA1-229ENST00000621897 FANCD2OSQ96PS1 177 aa8.12□□□□□ -1.11
BRCA1-229ENST00000621897 DUSP9Q99956 384 aaKnown RBP8.12□□□□□ -1.11
BRCA1-229ENST00000621897 CBX8Q9HC52 389 aa8.12□□□□□ -1.11
BRCA1-229ENST00000621897 HOXA10P31260 410 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-229ENST00000621897 ID3Q02535 119 aa8.11□□□□□ -1.11
BRCA1-229ENST00000621897 SEZ6L2Q6UXD5 910 aa8.11□□□□□ -1.11
BRCA1-229ENST00000621897 ZAR1Q86SH2 424 aa8.11□□□□□ -1.11
BRCA1-229ENST00000621897 ANKRD24Q8TF21 1146 aa8.11□□□□□ -1.11
BRCA1-229ENST00000621897 TBC1D32Q96NH3 1257 aa8.11□□□□□ -1.11
BRCA1-229ENST00000621897 CEP44Q9C0F1 390 aa8.11□□□□□ -1.11
BRCA1-229ENST00000621897 GZF1Q9H116 711 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-229ENST00000621897 LGR6Q9HBX8 967 aa8.11□□□□□ -1.11
BRCA1-229ENST00000621897 DISC1Q9NRI5 854 aa8.11□□□□□ -1.11
BRCA1-229ENST00000621897 PCMTD2Q9NV79 361 aa8.11□□□□□ -1.11
BRCA1-229ENST00000621897 DAGLAQ9Y4D2 1042 aa8.11□□□□□ -1.11
BRCA1-229ENST00000621897 KIAA1324LA8MWY0 1029 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-229ENST00000621897 COBLO75128 1261 aa8.1□□□□□ -1.11
BRCA1-229ENST00000621897 SLFN14P0C7P3 912 aa8.1□□□□□ -1.11
BRCA1-229ENST00000621897 MAP7Q14244 749 aa8.1□□□□□ -1.11
BRCA1-229ENST00000621897 EMILIN2Q9BXX0 1053 aa8.1□□□□□ -1.11
BRCA1-229ENST00000621897 C1GALT1Q9NS00 363 aa8.1□□□□□ -1.11
BRCA1-229ENST00000621897 CACNA2D2Q9NY47 1150 aa8.1□□□□□ -1.11
BRCA1-229ENST00000621897 FAM170BA6NMN3 283 aa8.09□□□□□ -1.11
BRCA1-229ENST00000621897 EIF4BP23588 611 aaKnown RBP8.09□□□□□ -1.11
BRCA1-229ENST00000621897 FRMD6Q96NE9 622 aa8.09□□□□□ -1.11
BRCA1-229ENST00000621897 AK5Q9Y6K8 562 aa8.09□□□□□ -1.11
BRCA1-229ENST00000621897 HCLS1P14317 486 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-229ENST00000621897 TAGLNQ01995 201 aaKnown RBP8.08□□□□□ -1.12
BRCA1-229ENST00000621897 TTLL4Q14679 1199 aa8.08□□□□□ -1.12
BRCA1-229ENST00000621897 NBPF11Q86T75 865 aa8.08□□□□□ -1.12
BRCA1-229ENST00000621897 OSBPL1AQ9BXW6 950 aa8.08□□□□□ -1.12
BRCA1-229ENST00000621897 ATXN3LQ9H3M9 355 aa8.08□□□□□ -1.12
BRCA1-229ENST00000621897 ATG3Q9NT62 314 aa8.08□□□□□ -1.12
BRCA1-229ENST00000621897 PIM2Q9P1W9 311 aa8.08□□□□□ -1.12
BRCA1-229ENST00000621897 PARP2Q9UGN5 583 aa8.08□□□□□ -1.12
BRCA1-229ENST00000621897 TTF2Q9UNY4 1162 aaKnown RBP8.08□□□□□ -1.12
BRCA1-229ENST00000621897 ADAMTS4O75173 837 aa8.07□□□□□ -1.12
BRCA1-229ENST00000621897 NEFMP07197 916 aa8.07□□□□□ -1.12
BRCA1-229ENST00000621897 SPINK2P20155 84 aa8.07□□□□□ -1.12
BRCA1-229ENST00000621897 ZC3H12AQ5D1E8 599 aaKnown RBP8.07□□□□□ -1.12
BRCA1-229ENST00000621897 PCNX4Q63HM2 1172 aa8.07□□□□□ -1.12
BRCA1-229ENST00000621897 FBXO33Q7Z6M2 555 aa8.07□□□□□ -1.12
BRCA1-229ENST00000621897 ACSBG1Q96GR2 724 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms