RNA–Protein interactions for RNA: ENST00000621573.1

TARDBP-224, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-224ENST00000621573 BCS1LQ9Y276 419 aa10.77□□□□□ -0.69
TARDBP-224ENST00000621573 PCDHGC4Q9Y5F7 938 aa10.77□□□□□ -0.69
TARDBP-224ENST00000621573 MEGF6O75095 1541 aa10.77□□□□□ -0.69
TARDBP-224ENST00000621573 ATXN7O15265 892 aaPredicted RBP10.76□□□□□ -0.69
TARDBP-224ENST00000621573 GAS6Q14393 721 aa10.76□□□□□ -0.69
TARDBP-224ENST00000621573 SAMD5Q5TGI4 173 aa10.76□□□□□ -0.69
TARDBP-224ENST00000621573 B4GALNT3Q6L9W6 998 aa10.76□□□□□ -0.69
TARDBP-224ENST00000621573 C16orf46Q6P387 395 aa10.76□□□□□ -0.69
TARDBP-224ENST00000621573 ACSBG1Q96GR2 724 aa10.76□□□□□ -0.69
TARDBP-224ENST00000621573 ABHD17AQ96GS6 310 aa10.76□□□□□ -0.69
TARDBP-224ENST00000621573 TRERF1Q96PN7 1200 aa10.76□□□□□ -0.69
TARDBP-224ENST00000621573 OVOS2A0A0G2JMS6 1433 aa10.75□□□□□ -0.69
TARDBP-224ENST00000621573 TNS2Q63HR2 1409 aa10.75□□□□□ -0.69
TARDBP-224ENST00000621573 HIF1AQ16665 826 aa10.75□□□□□ -0.69
TARDBP-224ENST00000621573 C11orf91Q3C1V1 193 aa10.75□□□□□ -0.69
TARDBP-224ENST00000621573 RNFT1Q5M7Z0 435 aa10.75□□□□□ -0.69
TARDBP-224ENST00000621573 CFHR5Q9BXR6 569 aa10.75□□□□□ -0.69
TARDBP-224ENST00000621573 COL25A1Q9BXS0 654 aaPredicted RBP10.75□□□□□ -0.69
TARDBP-224ENST00000621573 PCDH11XQ9BZA7 1347 aa10.75□□□□□ -0.69
TARDBP-224ENST00000621573 PCDH11YQ9BZA8 1340 aa10.75□□□□□ -0.69
TARDBP-224ENST00000621573 FAM208AQ9UK61 1670 aaKnown RBP10.74□□□□□ -0.69
TARDBP-224ENST00000621573 KRT76Q01546 638 aa10.74□□□□□ -0.69
TARDBP-224ENST00000621573 AMOTQ4VCS5 1084 aa10.74□□□□□ -0.69
TARDBP-224ENST00000621573 ZNF530Q6P9A1 599 aaPredicted RBP10.74□□□□□ -0.69
TARDBP-224ENST00000621573 HCN2Q9UL51 889 aa10.74□□□□□ -0.69
TARDBP-224ENST00000621573 ATXN7L1Q9ULK2 861 aaPredicted RBP10.74□□□□□ -0.69
TARDBP-224ENST00000621573 NCAPD2Q15021 1401 aa10.74□□□□□ -0.69
TARDBP-224ENST00000621573 BRWD3Q6RI45 1802 aa10.73□□□□□ -0.69
TARDBP-224ENST00000621573 DCDC2BA2VCK2 349 aa10.73□□□□□ -0.69
TARDBP-224ENST00000621573 CYP27B1O15528 508 aa10.73□□□□□ -0.69
TARDBP-224ENST00000621573 APBA3O96018 575 aa10.73□□□□□ -0.69
TARDBP-224ENST00000621573 FAM157BP0CG42 384 aa10.73□□□□□ -0.69
TARDBP-224ENST00000621573 TNP2Q05952 138 aa10.73□□□□□ -0.69
TARDBP-224ENST00000621573 C1orf141Q5JVX7 400 aa10.73□□□□□ -0.69
TARDBP-224ENST00000621573 IFNL2Q8IZJ0 200 aa10.73□□□□□ -0.69
TARDBP-224ENST00000621573 SYTL4Q96C24 671 aaPredicted RBP10.73□□□□□ -0.69
TARDBP-224ENST00000621573 PHF24Q9UPV7 400 aa10.73□□□□□ -0.69
TARDBP-224ENST00000621573 COL3A1P02461 1466 aaPredicted RBP10.73□□□□□ -0.69
TARDBP-224ENST00000621573 PARP4Q9UKK3 1724 aaKnown RBP10.72□□□□□ -0.69
TARDBP-224ENST00000621573 RGPD2P0DJD1 1756 aa10.72□□□□□ -0.69
TARDBP-224ENST00000621573 TGFBR3LH3BV60 316 aa10.72□□□□□ -0.69
TARDBP-224ENST00000621573 KHNYNO15037 678 aaKnown RBP10.72□□□□□ -0.69
TARDBP-224ENST00000621573 KCNQ2O43526 872 aa10.72□□□□□ -0.69
TARDBP-224ENST00000621573 NEFMP07197 916 aa10.72□□□□□ -0.69
TARDBP-224ENST00000621573 MAPTP10636 758 aaKnown RBP10.72□□□□□ -0.69
TARDBP-224ENST00000621573 PRKAR2BP31323 418 aa10.72□□□□□ -0.69
TARDBP-224ENST00000621573 BAG6P46379 1132 aa10.72□□□□□ -0.69
TARDBP-224ENST00000621573 WDR43Q15061 677 aaKnown RBP eCLIP10.72□□□□□ -0.69
TARDBP-224ENST00000621573 IER5Q5VY09 327 aa10.72□□□□□ -0.69
TARDBP-224ENST00000621573 BTLAQ7Z6A9 289 aa10.72□□□□□ -0.69
TARDBP-224ENST00000621573 DEFB132Q7Z7B7 95 aa10.72□□□□□ -0.69
TARDBP-224ENST00000621573 TRAIPQ9BWF2 469 aa10.72□□□□□ -0.69
TARDBP-224ENST00000621573 DMGDHQ9UI17 866 aaKnown RBP10.72□□□□□ -0.69
TARDBP-224ENST00000621573 LRRC37A3O60309 1634 aa10.72□□□□□ -0.69
TARDBP-224ENST00000621573 TNFRSF10BO14763 440 aa10.71□□□□□ -0.69
TARDBP-224ENST00000621573 EFSO43281 561 aa10.71□□□□□ -0.69
TARDBP-224ENST00000621573 HSP90AB1P08238 724 aaKnown RBP10.71□□□□□ -0.69
TARDBP-224ENST00000621573 PHKG2P15735 406 aa10.71□□□□□ -0.69
TARDBP-224ENST00000621573 KDRP35968 1356 aa10.71□□□□□ -0.69
TARDBP-224ENST00000621573 TYRO3Q06418 890 aa10.71□□□□□ -0.69
TARDBP-224ENST00000621573 IFT43Q96FT9 208 aa10.71□□□□□ -0.69
TARDBP-224ENST00000621573 CEP63Q96MT8 703 aa10.71□□□□□ -0.69
TARDBP-224ENST00000621573 CNTNAP3BQ96NU0 1288 aa10.71□□□□□ -0.69
TARDBP-224ENST00000621573 CNTNAP3Q9BZ76 1288 aa10.71□□□□□ -0.69
TARDBP-224ENST00000621573 FGFR3P22607 806 aa10.7□□□□□ -0.7
TARDBP-224ENST00000621573 PTF1AQ7RTS3 328 aa10.7□□□□□ -0.7
TARDBP-224ENST00000621573 GTF3C2Q8WUA4 911 aaPredicted RBP10.7□□□□□ -0.7
TARDBP-224ENST00000621573 PNNQ9H307 717 aaKnown RBP10.7□□□□□ -0.7
TARDBP-224ENST00000621573 BCL9O00512 1426 aa10.69□□□□□ -0.7
TARDBP-224ENST00000621573 BRD1O95696 1058 aa10.69□□□□□ -0.7
TARDBP-224ENST00000621573 ARID4AP29374 1257 aaPredicted RBP10.69□□□□□ -0.7
TARDBP-224ENST00000621573 MTHFSDQ2M296 383 aaKnown RBP10.69□□□□□ -0.7
TARDBP-224ENST00000621573 AKAP4Q5JQC9 854 aa10.69□□□□□ -0.7
TARDBP-224ENST00000621573 FAM26DQ5JW98 314 aa10.69□□□□□ -0.7
TARDBP-224ENST00000621573 MBIPQ9NS73 344 aa10.69□□□□□ -0.7
TARDBP-224ENST00000621573 PLEKHG2Q9H7P9 1386 aa10.68□□□□□ -0.7
TARDBP-224ENST00000621573 MICAL2O94851 1124 aa10.68□□□□□ -0.7
TARDBP-224ENST00000621573 MX2P20592 715 aa10.68□□□□□ -0.7
TARDBP-224ENST00000621573 BRD2P25440 801 aaKnown RBP10.68□□□□□ -0.7
TARDBP-224ENST00000621573 CTBSQ01459 385 aa10.68□□□□□ -0.7
TARDBP-224ENST00000621573 MPRIPQ6WCQ1 1025 aa10.68□□□□□ -0.7
TARDBP-224ENST00000621573 ETFBKMTQ8IXQ9 262 aa10.68□□□□□ -0.7
TARDBP-224ENST00000621573 HELQQ8TDG4 1101 aa10.68□□□□□ -0.7
TARDBP-224ENST00000621573 DCAF5Q96JK2 942 aa10.68□□□□□ -0.7
TARDBP-224ENST00000621573 PHACTR3Q96KR7 559 aa10.68□□□□□ -0.7
TARDBP-224ENST00000621573 MRS2Q9HD23 443 aa10.68□□□□□ -0.7
TARDBP-224ENST00000621573 BRD7Q9NPI1 651 aa10.68□□□□□ -0.7
TARDBP-224ENST00000621573 STIM2Q9P246 746 aa10.68□□□□□ -0.7
TARDBP-224ENST00000621573 MTMR7Q9Y216 660 aa10.68□□□□□ -0.7
TARDBP-224ENST00000621573 DNMT3AQ9Y6K1 912 aaPredicted RBP10.68□□□□□ -0.7
TARDBP-224ENST00000621573 KAT6BQ8WYB5 2073 aa10.68□□□□□ -0.7
TARDBP-224ENST00000621573 WNK3Q9BYP7 1800 aa10.68□□□□□ -0.7
TARDBP-224ENST00000621573 MAPK8IP3Q9UPT6 1336 aa10.67□□□□□ -0.7
TARDBP-224ENST00000621573 WIPF1O43516 503 aa10.67□□□□□ -0.7
TARDBP-224ENST00000621573 CD33P20138 364 aa10.67□□□□□ -0.7
TARDBP-224ENST00000621573 IDH3AP50213 366 aa10.67□□□□□ -0.7
TARDBP-224ENST00000621573 CABP4P57796 275 aa10.67□□□□□ -0.7
TARDBP-224ENST00000621573 SFSWAPQ12872 951 aaKnown RBP10.67□□□□□ -0.7
TARDBP-224ENST00000621573 MTMR3Q13615 1198 aa10.67□□□□□ -0.7
TARDBP-224ENST00000621573 LAMC2Q13753 1193 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms