RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 TTF1Q15361 905 aaPredicted RBP17.41■□□□□ 0.38
CBWD3-217ENST00000621474 PLEKHM2Q8IWE5 1019 aa17.41■□□□□ 0.38
CBWD3-217ENST00000621474 GPATCH3Q96I76 525 aa17.41■□□□□ 0.38
CBWD3-217ENST00000621474 VEZTQ9HBM0 779 aa17.41■□□□□ 0.38
CBWD3-217ENST00000621474 CNTNAP1P78357 1384 aa17.41■□□□□ 0.38
CBWD3-217ENST00000621474 SSC5DA1L4H1 1573 aa17.4■□□□□ 0.38
CBWD3-217ENST00000621474 NEFLP07196 543 aa17.4■□□□□ 0.38
CBWD3-217ENST00000621474 HSPA6P17066 643 aa17.4■□□□□ 0.38
CBWD3-217ENST00000621474 BTDP43251 543 aa17.4■□□□□ 0.38
CBWD3-217ENST00000621474 RHBDL3P58872 404 aa17.4■□□□□ 0.38
CBWD3-217ENST00000621474 PRAMEF18Q5VWM3 479 aa17.4■□□□□ 0.38
CBWD3-217ENST00000621474 NAA16Q6N069 864 aaPredicted RBP17.4■□□□□ 0.38
CBWD3-217ENST00000621474 DEFB129Q9H1M3 183 aa17.4■□□□□ 0.38
CBWD3-217ENST00000621474 ZBTB47Q9UFB7 747 aaPredicted RBP17.4■□□□□ 0.38
CBWD3-217ENST00000621474 GLRX3O76003 335 aaKnown RBP17.39■□□□□ 0.38
CBWD3-217ENST00000621474 APLP1P51693 650 aa17.39■□□□□ 0.38
CBWD3-217ENST00000621474 NFIAQ12857 509 aa17.39■□□□□ 0.38
CBWD3-217ENST00000621474 SLFNL1Q499Z3 407 aa17.39■□□□□ 0.38
CBWD3-217ENST00000621474 CDAN1Q8IWY9 1227 aa17.39■□□□□ 0.38
CBWD3-217ENST00000621474 SLF2Q8IX21 1173 aa17.39■□□□□ 0.38
CBWD3-217ENST00000621474 MAGEB6Q8N7X4 407 aa17.39■□□□□ 0.38
CBWD3-217ENST00000621474 CDCA5Q96FF9 252 aa17.39■□□□□ 0.38
CBWD3-217ENST00000621474 TCRBV5S4A2TA0A5A2 114 aa17.39■□□□□ 0.37
CBWD3-217ENST00000621474 TCP10L2B9ZVM9 353 aa17.39■□□□□ 0.37
CBWD3-217ENST00000621474 ERC2O15083 957 aa17.39■□□□□ 0.37
CBWD3-217ENST00000621474 GSTO1P78417 241 aa17.39■□□□□ 0.37
CBWD3-217ENST00000621474 HTRA3P83110 453 aa17.39■□□□□ 0.37
CBWD3-217ENST00000621474 MAP3K12Q12852 859 aa17.39■□□□□ 0.37
CBWD3-217ENST00000621474 OSBPL3Q9H4L5 887 aa17.39■□□□□ 0.37
CBWD3-217ENST00000621474 WDHD1O75717 1129 aaPredicted RBP17.38■□□□□ 0.37
CBWD3-217ENST00000621474 MAP4K4O95819 1239 aaPredicted RBP17.38■□□□□ 0.37
CBWD3-217ENST00000621474 PDE6AP16499 860 aa17.38■□□□□ 0.37
CBWD3-217ENST00000621474 RASA3Q14644 834 aa17.38■□□□□ 0.37
CBWD3-217ENST00000621474 TEPSINQ96N21 525 aa17.38■□□□□ 0.37
CBWD3-217ENST00000621474 USP40Q9NVE5 1235 aa17.38■□□□□ 0.37
CBWD3-217ENST00000621474 CELF2O95319 508 aaKnown RBP17.37■□□□□ 0.37
CBWD3-217ENST00000621474 LDHCP07864 332 aa17.37■□□□□ 0.37
CBWD3-217ENST00000621474 CYP7A1P22680 504 aa17.37■□□□□ 0.37
CBWD3-217ENST00000621474 SLC9C2Q5TAH2 1124 aa17.37■□□□□ 0.37
CBWD3-217ENST00000621474 FKBP1CQ5VVH2 108 aa17.37■□□□□ 0.37
CBWD3-217ENST00000621474 IDI2Q9BXS1 227 aa17.37■□□□□ 0.37
CBWD3-217ENST00000621474 TMEM39BQ9GZU3 492 aa17.37■□□□□ 0.37
CBWD3-217ENST00000621474 AATFQ9NY61 560 aaKnown RBP eCLIP17.37■□□□□ 0.37
CBWD3-217ENST00000621474 FAM198AQ9UFP1 575 aa17.37■□□□□ 0.37
CBWD3-217ENST00000621474 AK9Q5TCS8 1911 aa17.37■□□□□ 0.37
CBWD3-217ENST00000621474 ZNF532Q9HCE3 1301 aa17.37■□□□□ 0.37
CBWD3-217ENST00000621474 ADD2P35612 726 aa17.36■□□□□ 0.37
CBWD3-217ENST00000621474 PPP4CP60510 307 aa17.36■□□□□ 0.37
CBWD3-217ENST00000621474 TNFAIP1Q13829 316 aa17.36■□□□□ 0.37
CBWD3-217ENST00000621474 KBTBD3Q8NAB2 608 aa17.36■□□□□ 0.37
CBWD3-217ENST00000621474 DDX4Q9NQI0 724 aaKnown RBP17.36■□□□□ 0.37
CBWD3-217ENST00000621474 PPP2R3BQ9Y5P8 575 aa17.36■□□□□ 0.37
CBWD3-217ENST00000621474 PAPPA2Q9BXP8 1791 aa17.36■□□□□ 0.37
CBWD3-217ENST00000621474 TMEM88BA6NKF7 163 aa17.36■□□□□ 0.37
CBWD3-217ENST00000621474 DYNLL1P63167 89 aaKnown RBP17.36■□□□□ 0.37
CBWD3-217ENST00000621474 TMED8Q6PL24 325 aaPredicted RBP17.36■□□□□ 0.37
CBWD3-217ENST00000621474 CENPQQ7L2Z9 268 aaPredicted RBP17.36■□□□□ 0.37
CBWD3-217ENST00000621474 FAM83AQ86UY5 434 aa17.36■□□□□ 0.37
CBWD3-217ENST00000621474 MIGA1Q8NAN2 632 aa17.36■□□□□ 0.37
CBWD3-217ENST00000621474 SH3RF3Q8TEJ3 882 aaPredicted RBP17.36■□□□□ 0.37
CBWD3-217ENST00000621474 RIOK1Q9BRS2 568 aaKnown RBP17.36■□□□□ 0.37
CBWD3-217ENST00000621474 ZNF408Q9H9D4 720 aa17.36■□□□□ 0.37
CBWD3-217ENST00000621474 CREBZFQ9NS37 354 aa17.36■□□□□ 0.37
CBWD3-217ENST00000621474 DDX60LQ5H9U9 1706 aaKnown RBP17.35■□□□□ 0.37
CBWD3-217ENST00000621474 OTOFQ9HC10 1997 aa17.35■□□□□ 0.37
CBWD3-217ENST00000621474 NBPF12Q5TAG4 269 aaPredicted RBP17.35■□□□□ 0.37
CBWD3-217ENST00000621474 ZFPM1Q8IX07 1006 aa17.35■□□□□ 0.37
CBWD3-217ENST00000621474 TMOD2Q9NZR1 351 aa17.35■□□□□ 0.37
CBWD3-217ENST00000621474 RPAP1Q9BWH6 1393 aaPredicted RBP17.34■□□□□ 0.37
CBWD3-217ENST00000621474 SIPA1L1O43166 1804 aa17.34■□□□□ 0.37
CBWD3-217ENST00000621474 SKAP1Q86WV1 359 aa17.34■□□□□ 0.37
CBWD3-217ENST00000621474 CCDC136Q96JN2 1154 aa17.34■□□□□ 0.37
CBWD3-217ENST00000621474 FZD1Q9UP38 647 aa17.34■□□□□ 0.37
CBWD3-217ENST00000621474 RGS3P49796 1198 aa17.33■□□□□ 0.37
CBWD3-217ENST00000621474 TCP10Q12799 353 aa17.33■□□□□ 0.37
CBWD3-217ENST00000621474 UBE3CQ15386 1083 aa17.33■□□□□ 0.37
CBWD3-217ENST00000621474 ERICH6BQ5W0A0 696 aa17.33■□□□□ 0.37
CBWD3-217ENST00000621474 SAPCD2Q86UD0 394 aa17.33■□□□□ 0.37
CBWD3-217ENST00000621474 FAM151AQ8WW52 585 aa17.33■□□□□ 0.37
CBWD3-217ENST00000621474 MYH1P12882 1939 aa17.33■□□□□ 0.36
CBWD3-217ENST00000621474 BAG3O95817 575 aa17.32■□□□□ 0.36
CBWD3-217ENST00000621474 TNNI2P48788 182 aa17.32■□□□□ 0.36
CBWD3-217ENST00000621474 SH3BP5LQ7L8J4 393 aa17.32■□□□□ 0.36
CBWD3-217ENST00000621474 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.32■□□□□ 0.36
CBWD3-217ENST00000621474 GBA2Q9HCG7 927 aaPredicted RBP17.32■□□□□ 0.36
CBWD3-217ENST00000621474 ENTPD3O75355 529 aa17.32■□□□□ 0.36
CBWD3-217ENST00000621474 NPM3O75607 178 aaKnown RBP17.32■□□□□ 0.36
CBWD3-217ENST00000621474 PICALMQ13492 652 aa17.32■□□□□ 0.36
CBWD3-217ENST00000621474 MOB2Q70IA6 237 aa17.32■□□□□ 0.36
CBWD3-217ENST00000621474 PUS7LQ9H0K6 701 aaKnown RBP17.32■□□□□ 0.36
CBWD3-217ENST00000621474 TLL2Q9Y6L7 1015 aa17.32■□□□□ 0.36
CBWD3-217ENST00000621474 ATRNL1Q5VV63 1379 aa17.32■□□□□ 0.36
CBWD3-217ENST00000621474 NAV1Q8NEY1 1877 aa17.31■□□□□ 0.36
CBWD3-217ENST00000621474 GSPT1P15170 499 aaKnown RBP17.31■□□□□ 0.36
CBWD3-217ENST00000621474 TEX11Q8IYF3 940 aa17.31■□□□□ 0.36
CBWD3-217ENST00000621474 LCORLQ8N3X6 602 aa17.31■□□□□ 0.36
CBWD3-217ENST00000621474 EVI5LQ96CN4 794 aa17.31■□□□□ 0.36
CBWD3-217ENST00000621474 BAZ2AQ9UIF9 1905 aaKnown RBP17.31■□□□□ 0.36
CBWD3-217ENST00000621474 FLT1P17948 1338 aa17.3■□□□□ 0.36
CBWD3-217ENST00000621474 COL2A1P02458 1487 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms