RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 CYP46A1Q9Y6A2 500 aa18.94■□□□□ 0.62
CBWD3-216ENST00000621396 COL4A5P29400 1685 aa18.93■□□□□ 0.62
CBWD3-216ENST00000621396 TTC14Q96N46 770 aa18.93■□□□□ 0.62
CBWD3-216ENST00000621396 SCN9AQ15858 1988 aa18.93■□□□□ 0.62
CBWD3-216ENST00000621396 RPAP1Q9BWH6 1393 aaPredicted RBP18.93■□□□□ 0.62
CBWD3-216ENST00000621396 MINDY4BA8MYZ0 360 aa18.93■□□□□ 0.62
CBWD3-216ENST00000621396 BLOC1S2Q6QNY1 142 aa18.93■□□□□ 0.62
CBWD3-216ENST00000621396 TBC1D10CQ8IV04 446 aa18.93■□□□□ 0.62
CBWD3-216ENST00000621396 TBC1D22AQ8WUA7 517 aa18.93■□□□□ 0.62
CBWD3-216ENST00000621396 PDRG1Q9NUG6 133 aa18.93■□□□□ 0.62
CBWD3-216ENST00000621396 CTNNA3Q9UI47 895 aa18.93■□□□□ 0.62
CBWD3-216ENST00000621396 TSGA10IPQ3SY00 556 aa18.92■□□□□ 0.62
CBWD3-216ENST00000621396 PSMD1Q99460 953 aa18.92■□□□□ 0.62
CBWD3-216ENST00000621396 TACC3Q9Y6A5 838 aa18.92■□□□□ 0.62
CBWD3-216ENST00000621396 NFKBIEO00221 500 aa18.92■□□□□ 0.62
CBWD3-216ENST00000621396 BTDP43251 543 aa18.92■□□□□ 0.62
CBWD3-216ENST00000621396 RASSF7Q02833 373 aa18.92■□□□□ 0.62
CBWD3-216ENST00000621396 SUPT20HQ8NEM7 779 aa18.92■□□□□ 0.62
CBWD3-216ENST00000621396 HSP90AA1P07900 732 aaKnown RBP18.91■□□□□ 0.62
CBWD3-216ENST00000621396 DACT2Q5SW24 774 aa18.91■□□□□ 0.62
CBWD3-216ENST00000621396 TMX3Q96JJ7 454 aa18.91■□□□□ 0.62
CBWD3-216ENST00000621396 ZBTB12Q9Y330 459 aaPredicted RBP18.91■□□□□ 0.62
CBWD3-216ENST00000621396 MROH7-TTC4A0A0A0MT08 1334 aa18.91■□□□□ 0.62
CBWD3-216ENST00000621396 USP17L3A6NCW0 530 aa18.9■□□□□ 0.62
CBWD3-216ENST00000621396 USP17L4A6NCW7 530 aa18.9■□□□□ 0.62
CBWD3-216ENST00000621396 GNAT2P19087 354 aa18.9■□□□□ 0.62
CBWD3-216ENST00000621396 RPS6KB1P23443 525 aa18.9■□□□□ 0.62
CBWD3-216ENST00000621396 PSMA5P28066 241 aa18.9■□□□□ 0.62
CBWD3-216ENST00000621396 USP17L1Q7RTZ2 530 aa18.9■□□□□ 0.62
CBWD3-216ENST00000621396 TGFBRAP1Q8WUH2 860 aa18.9■□□□□ 0.62
CBWD3-216ENST00000621396 NACAP1Q9BZK3 213 aa18.9■□□□□ 0.62
CBWD3-216ENST00000621396 TM6SF1Q9BZW5 370 aa18.9■□□□□ 0.62
CBWD3-216ENST00000621396 TAOK3Q9H2K8 898 aa18.9■□□□□ 0.62
CBWD3-216ENST00000621396 ZBTB22O15209 634 aa18.9■□□□□ 0.62
CBWD3-216ENST00000621396 LARGE1O95461 756 aa18.9■□□□□ 0.62
CBWD3-216ENST00000621396 STRIP1Q5VSL9 837 aa18.9■□□□□ 0.62
CBWD3-216ENST00000621396 GPHNQ9NQX3 736 aaPredicted RBP18.9■□□□□ 0.62
CBWD3-216ENST00000621396 DAGLAQ9Y4D2 1042 aa18.9■□□□□ 0.62
CBWD3-216ENST00000621396 USP17L12C9JPN9 530 aa18.89■□□□□ 0.61
CBWD3-216ENST00000621396 USP17L21D6R901 530 aa18.89■□□□□ 0.61
CBWD3-216ENST00000621396 CYP2D6P10635 497 aa18.89■□□□□ 0.61
CBWD3-216ENST00000621396 PRELPP51888 382 aa18.89■□□□□ 0.61
CBWD3-216ENST00000621396 GSTO1P78417 241 aa18.89■□□□□ 0.61
CBWD3-216ENST00000621396 DCP1AQ9NPI6 582 aaPredicted RBP18.89■□□□□ 0.61
CBWD3-216ENST00000621396 CCDC88AQ3V6T2 1871 aa18.89■□□□□ 0.61
CBWD3-216ENST00000621396 IARSP41252 1262 aaKnown RBP18.89■□□□□ 0.61
CBWD3-216ENST00000621396 KRT32Q14532 448 aa18.89■□□□□ 0.61
CBWD3-216ENST00000621396 CRNKL1Q9BZJ0 848 aaKnown RBP18.89■□□□□ 0.61
CBWD3-216ENST00000621396 MYH2Q9UKX2 1941 aa18.88■□□□□ 0.61
CBWD3-216ENST00000621396 NEDD4P46934 1319 aa18.88■□□□□ 0.61
CBWD3-216ENST00000621396 USP17L8P0C7I0 530 aa18.88■□□□□ 0.61
CBWD3-216ENST00000621396 RRP12Q5JTH9 1297 aaKnown RBP18.88■□□□□ 0.61
CBWD3-216ENST00000621396 MAPKAPK5Q8IW41 473 aa18.88■□□□□ 0.61
CBWD3-216ENST00000621396 TOMM22Q9NS69 142 aa18.88■□□□□ 0.61
CBWD3-216ENST00000621396 PSMD14O00487 310 aa18.88■□□□□ 0.61
CBWD3-216ENST00000621396 USP5P45974 858 aa18.88■□□□□ 0.61
CBWD3-216ENST00000621396 RBM5P52756 815 aaKnown RBP eCLIP18.88■□□□□ 0.61
CBWD3-216ENST00000621396 TOB2Q14106 344 aaPredicted RBP18.88■□□□□ 0.61
CBWD3-216ENST00000621396 CTR9Q6PD62 1173 aa18.88■□□□□ 0.61
CBWD3-216ENST00000621396 Q6ZUG5 572 aa18.88■□□□□ 0.61
CBWD3-216ENST00000621396 MCM9Q9NXL9 1143 aa18.88■□□□□ 0.61
CBWD3-216ENST00000621396 SAP30BPQ9UHR5 308 aaKnown RBP18.88■□□□□ 0.61
CBWD3-216ENST00000621396 BRCA1P38398 1863 aaKnown RBP18.87■□□□□ 0.61
CBWD3-216ENST00000621396 BAZ2AQ9UIF9 1905 aaKnown RBP18.87■□□□□ 0.61
CBWD3-216ENST00000621396 GPR75-ASB3A0A0A6YYF3 556 aa18.87■□□□□ 0.61
CBWD3-216ENST00000621396 B4E1Z4 1266 aa18.87■□□□□ 0.61
CBWD3-216ENST00000621396 PRDM1O75626 825 aa18.87■□□□□ 0.61
CBWD3-216ENST00000621396 BAG3O95817 575 aa18.87■□□□□ 0.61
CBWD3-216ENST00000621396 ALX1Q15699 326 aa18.87■□□□□ 0.61
CBWD3-216ENST00000621396 SOGA3Q5TF21 947 aa18.87■□□□□ 0.61
CBWD3-216ENST00000621396 LDHCP07864 332 aa18.86■□□□□ 0.61
CBWD3-216ENST00000621396 CACNB3P54284 484 aa18.86■□□□□ 0.61
CBWD3-216ENST00000621396 PPARAQ07869 468 aa18.86■□□□□ 0.61
CBWD3-216ENST00000621396 NOL10Q9BSC4 688 aaKnown RBP18.86■□□□□ 0.61
CBWD3-216ENST00000621396 SYT17Q9BSW7 474 aa18.86■□□□□ 0.61
CBWD3-216ENST00000621396 TPCN1Q9ULQ1 816 aa18.86■□□□□ 0.61
CBWD3-216ENST00000621396 RHBDL3P58872 404 aa18.86■□□□□ 0.61
CBWD3-216ENST00000621396 FGD1P98174 961 aa18.86■□□□□ 0.61
CBWD3-216ENST00000621396 STK3Q13188 491 aa18.86■□□□□ 0.61
CBWD3-216ENST00000621396 PICALMQ13492 652 aa18.86■□□□□ 0.61
CBWD3-216ENST00000621396 DHX32Q7L7V1 743 aaKnown RBP18.85■□□□□ 0.61
CBWD3-216ENST00000621396 NIM1KQ8IY84 436 aa18.85■□□□□ 0.61
CBWD3-216ENST00000621396 NECAB1Q8N987 351 aa18.85■□□□□ 0.61
CBWD3-216ENST00000621396 BRF1Q92994 677 aa18.85■□□□□ 0.61
CBWD3-216ENST00000621396 ADAMTSL1Q8N6G6 1762 aa18.85■□□□□ 0.61
CBWD3-216ENST00000621396 CRKP46108 304 aa18.85■□□□□ 0.61
CBWD3-216ENST00000621396 ME3Q16798 604 aa18.85■□□□□ 0.61
CBWD3-216ENST00000621396 GRIPAP1Q4V328 841 aa18.85■□□□□ 0.61
CBWD3-216ENST00000621396 CYB5R4Q7L1T6 521 aa18.85■□□□□ 0.61
CBWD3-216ENST00000621396 TEX11Q8IYF3 940 aa18.85■□□□□ 0.61
CBWD3-216ENST00000621396 PPP4CP60510 307 aa18.84■□□□□ 0.61
CBWD3-216ENST00000621396 RALYLQ86SE5 291 aaKnown RBP18.84■□□□□ 0.61
CBWD3-216ENST00000621396 NCOA7Q8NI08 942 aa18.84■□□□□ 0.61
CBWD3-216ENST00000621396 ZKSCAN3Q9BRR0 538 aa18.84■□□□□ 0.61
CBWD3-216ENST00000621396 GAKO14976 1311 aa18.84■□□□□ 0.61
CBWD3-216ENST00000621396 ANTXR2P58335 489 aa18.84■□□□□ 0.61
CBWD3-216ENST00000621396 EXOSC10Q01780 885 aaKnown RBP18.84■□□□□ 0.61
CBWD3-216ENST00000621396 CXCL9Q07325 125 aa18.84■□□□□ 0.61
CBWD3-216ENST00000621396 APOBEC3HQ6NTF7 200 aaKnown RBP18.84■□□□□ 0.61
CBWD3-216ENST00000621396 TEKT1Q969V4 418 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms