RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 GPR75-ASB3A0A0A6YYF3 556 aa13.22□□□□□ -0.29
POLR2J3-221ENST00000621093 RNF113AO15541 343 aaKnown RBP13.22□□□□□ -0.29
POLR2J3-221ENST00000621093 LDHCP07864 332 aa13.22□□□□□ -0.29
POLR2J3-221ENST00000621093 CACNB3P54284 484 aa13.22□□□□□ -0.29
POLR2J3-221ENST00000621093 CDC42EP5Q6NZY7 148 aa13.22□□□□□ -0.29
POLR2J3-221ENST00000621093 FAM163AQ96GL9 167 aaPredicted RBP13.22□□□□□ -0.29
POLR2J3-221ENST00000621093 SEC62Q99442 399 aaKnown RBP13.22□□□□□ -0.29
POLR2J3-221ENST00000621093 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.22□□□□□ -0.29
POLR2J3-221ENST00000621093 AATFQ9NY61 560 aaKnown RBP eCLIP13.22□□□□□ -0.29
POLR2J3-221ENST00000621093 ZNF70Q9UC06 446 aaPredicted RBP13.22□□□□□ -0.29
POLR2J3-221ENST00000621093 CLEC11AQ9Y240 323 aa13.22□□□□□ -0.29
POLR2J3-221ENST00000621093 M0R2C6 588 aa13.21□□□□□ -0.29
POLR2J3-221ENST00000621093 MMP14P50281 582 aa13.21□□□□□ -0.29
POLR2J3-221ENST00000621093 ANGEL2Q5VTE6 544 aaKnown RBP13.21□□□□□ -0.29
POLR2J3-221ENST00000621093 DLK2Q6UY11 383 aa13.21□□□□□ -0.29
POLR2J3-221ENST00000621093 SLF2Q8IX21 1173 aa13.21□□□□□ -0.29
POLR2J3-221ENST00000621093 SH3RF3Q8TEJ3 882 aaPredicted RBP13.21□□□□□ -0.29
POLR2J3-221ENST00000621093 OSBP2Q969R2 916 aa13.21□□□□□ -0.29
POLR2J3-221ENST00000621093 PUS7LQ9H0K6 701 aaKnown RBP13.21□□□□□ -0.29
POLR2J3-221ENST00000621093 USP40Q9NVE5 1235 aa13.21□□□□□ -0.29
POLR2J3-221ENST00000621093 GGA3Q9NZ52 723 aa13.21□□□□□ -0.29
POLR2J3-221ENST00000621093 RHBDL3P58872 404 aa13.2□□□□□ -0.3
POLR2J3-221ENST00000621093 NMIQ13287 307 aaPredicted RBP13.2□□□□□ -0.3
POLR2J3-221ENST00000621093 UBE3CQ15386 1083 aa13.2□□□□□ -0.3
POLR2J3-221ENST00000621093 SPDYE2Q495Y8 402 aa13.2□□□□□ -0.3
POLR2J3-221ENST00000621093 MAP1SQ66K74 1059 aaPredicted RBP13.2□□□□□ -0.3
POLR2J3-221ENST00000621093 ZSCAN25Q6NSZ9 544 aa13.2□□□□□ -0.3
POLR2J3-221ENST00000621093 PNMA8AQ86V59 439 aaPredicted RBP13.2□□□□□ -0.3
POLR2J3-221ENST00000621093 LCORLQ8N3X6 602 aa13.2□□□□□ -0.3
POLR2J3-221ENST00000621093 FAM227BQ96M60 508 aa13.2□□□□□ -0.3
POLR2J3-221ENST00000621093 ARMT1Q9H993 441 aa13.2□□□□□ -0.3
POLR2J3-221ENST00000621093 VEZTQ9HBM0 779 aa13.2□□□□□ -0.3
POLR2J3-221ENST00000621093 DDX60LQ5H9U9 1706 aaKnown RBP13.19□□□□□ -0.3
POLR2J3-221ENST00000621093 TRPM7Q96QT4 1865 aa13.19□□□□□ -0.3
POLR2J3-221ENST00000621093 SIPA1L1O43166 1804 aa13.19□□□□□ -0.3
POLR2J3-221ENST00000621093 A0A0D9SFI3 127 aa13.19□□□□□ -0.3
POLR2J3-221ENST00000621093 MAGEB6P1A0A0J9YX57 407 aa13.19□□□□□ -0.3
POLR2J3-221ENST00000621093 TCP10L2B9ZVM9 353 aa13.19□□□□□ -0.3
POLR2J3-221ENST00000621093 IGSF3O75054 1194 aa13.19□□□□□ -0.3
POLR2J3-221ENST00000621093 MBD4O95243 580 aa13.19□□□□□ -0.3
POLR2J3-221ENST00000621093 PPP4CP60510 307 aa13.19□□□□□ -0.3
POLR2J3-221ENST00000621093 NFIAQ12857 509 aa13.19□□□□□ -0.3
POLR2J3-221ENST00000621093 BMP2KLQ5H9B9 411 aa13.19□□□□□ -0.3
POLR2J3-221ENST00000621093 ZMYM1Q5SVZ6 1142 aa13.19□□□□□ -0.3
POLR2J3-221ENST00000621093 CCDC129Q6ZRS4 1044 aa13.19□□□□□ -0.3
POLR2J3-221ENST00000621093 APPBP2Q92624 585 aa13.19□□□□□ -0.3
POLR2J3-221ENST00000621093 RIOK1Q9BRS2 568 aaKnown RBP13.19□□□□□ -0.3
POLR2J3-221ENST00000621093 PGAP2Q9UHJ9 254 aa13.19□□□□□ -0.3
POLR2J3-221ENST00000621093 RFX7Q2KHR2 1363 aa13.19□□□□□ -0.3
POLR2J3-221ENST00000621093 ADM5C9JUS6 153 aa13.18□□□□□ -0.3
POLR2J3-221ENST00000621093 PRKAB2O43741 272 aa13.18□□□□□ -0.3
POLR2J3-221ENST00000621093 MYO1BO43795 1136 aa13.18□□□□□ -0.3
POLR2J3-221ENST00000621093 WDHD1O75717 1129 aaPredicted RBP13.18□□□□□ -0.3
POLR2J3-221ENST00000621093 ZFYP08048 801 aaPredicted RBP13.18□□□□□ -0.3
POLR2J3-221ENST00000621093 FMR1Q06787 632 aaKnown RBP eCLIP13.18□□□□□ -0.3
POLR2J3-221ENST00000621093 USP48Q86UV5 1035 aa13.18□□□□□ -0.3
POLR2J3-221ENST00000621093 LDHDQ86WU2 507 aa13.18□□□□□ -0.3
POLR2J3-221ENST00000621093 ZFPM1Q8IX07 1006 aa13.18□□□□□ -0.3
POLR2J3-221ENST00000621093 TEX11Q8IYF3 940 aa13.18□□□□□ -0.3
POLR2J3-221ENST00000621093 NOL10Q9BSC4 688 aaKnown RBP13.18□□□□□ -0.3
POLR2J3-221ENST00000621093 GLIS2Q9BZE0 524 aaPredicted RBP13.18□□□□□ -0.3
POLR2J3-221ENST00000621093 IL25Q9H293 177 aa13.18□□□□□ -0.3
POLR2J3-221ENST00000621093 DDX4Q9NQI0 724 aaKnown RBP13.18□□□□□ -0.3
POLR2J3-221ENST00000621093 FAM198AQ9UFP1 575 aa13.18□□□□□ -0.3
POLR2J3-221ENST00000621093 CNTNAP1P78357 1384 aa13.18□□□□□ -0.3
POLR2J3-221ENST00000621093 BAG3O95817 575 aa13.17□□□□□ -0.3
POLR2J3-221ENST00000621093 CHMLP26374 656 aa13.17□□□□□ -0.3
POLR2J3-221ENST00000621093 TCP10Q12799 353 aa13.17□□□□□ -0.3
POLR2J3-221ENST00000621093 PICALMQ13492 652 aa13.17□□□□□ -0.3
POLR2J3-221ENST00000621093 PRAMEF18Q5VWM3 479 aa13.17□□□□□ -0.3
POLR2J3-221ENST00000621093 CWC27Q6UX04 472 aaKnown RBP13.17□□□□□ -0.3
POLR2J3-221ENST00000621093 CDAN1Q8IWY9 1227 aa13.17□□□□□ -0.3
POLR2J3-221ENST00000621093 ZC3H15Q8WU90 426 aaKnown RBP13.17□□□□□ -0.3
POLR2J3-221ENST00000621093 TGFBRAP1Q8WUH2 860 aa13.17□□□□□ -0.3
POLR2J3-221ENST00000621093 DCPSQ96C86 337 aaKnown RBP13.17□□□□□ -0.3
POLR2J3-221ENST00000621093 LAMB1P07942 1786 aa13.17□□□□□ -0.3
POLR2J3-221ENST00000621093 TRAF5O00463 557 aa13.16□□□□□ -0.3
POLR2J3-221ENST00000621093 GPAA1O43292 621 aa13.16□□□□□ -0.3
POLR2J3-221ENST00000621093 LRRFIP1Q32MZ4 808 aaKnown RBP13.16□□□□□ -0.3
POLR2J3-221ENST00000621093 CHADLQ6NUI6 762 aa13.16□□□□□ -0.3
POLR2J3-221ENST00000621093 TMED8Q6PL24 325 aaPredicted RBP13.16□□□□□ -0.3
POLR2J3-221ENST00000621093 ZNF589Q86UQ0 364 aaPredicted RBP13.16□□□□□ -0.3
POLR2J3-221ENST00000621093 MAPKAPK5Q8IW41 473 aa13.16□□□□□ -0.3
POLR2J3-221ENST00000621093 SDR42E1Q8WUS8 393 aa13.16□□□□□ -0.3
POLR2J3-221ENST00000621093 AIDAQ96BJ3 306 aa13.16□□□□□ -0.3
POLR2J3-221ENST00000621093 STRBPQ96SI9 672 aaKnown RBP13.16□□□□□ -0.3
POLR2J3-221ENST00000621093 DIAPH3Q9NSV4 1193 aa13.16□□□□□ -0.3
POLR2J3-221ENST00000621093 TMOD2Q9NZR1 351 aa13.16□□□□□ -0.3
POLR2J3-221ENST00000621093 PITPNM2Q9BZ72 1349 aa13.15□□□□□ -0.3
POLR2J3-221ENST00000621093 PLCG2P16885 1265 aa13.15□□□□□ -0.3
POLR2J3-221ENST00000621093 RASA3Q14644 834 aa13.15□□□□□ -0.3
POLR2J3-221ENST00000621093 MCMDC2Q4G0Z9 681 aa13.15□□□□□ -0.3
POLR2J3-221ENST00000621093 KRT26Q7Z3Y9 468 aa13.15□□□□□ -0.3
POLR2J3-221ENST00000621093 APOBEC3FQ8IUX4 373 aaKnown RBP13.15□□□□□ -0.3
POLR2J3-221ENST00000621093 IDI2Q9BXS1 227 aa13.15□□□□□ -0.3
POLR2J3-221ENST00000621093 TMEM39BQ9GZU3 492 aa13.15□□□□□ -0.3
POLR2J3-221ENST00000621093 HELLSQ9NRZ9 838 aa13.15□□□□□ -0.3
POLR2J3-221ENST00000621093 SLC4A4Q9Y6R1 1079 aa13.15□□□□□ -0.3
POLR2J3-221ENST00000621093 MYH8P13535 1937 aa13.15□□□□□ -0.3
POLR2J3-221ENST00000621093 TOMM70O94826 608 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms