RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 NR2E3Q9Y5X4 410 aa8.02□□□□□ -1.12
COLCA1-205ENST00000620864 GOLGA8AA7E2F4 631 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 IGSF3O75054 1194 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 PRPF40BQ6NWY9 871 aaKnown RBP8.02□□□□□ -1.13
COLCA1-205ENST00000620864 RASEFQ8IZ41 740 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 CCDC82Q8N4S0 544 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 NEK11Q8NG66 645 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 SEPT8Q92599 483 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 ATP6V0A2Q9Y487 856 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 CEP104O60308 925 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 APBA1Q02410 837 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 PAK2Q13177 524 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 UBLCP1Q8WVY7 318 aaPredicted RBP8.02□□□□□ -1.13
COLCA1-205ENST00000620864 ZBTB9Q96C00 473 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 TBC1D32Q96NH3 1257 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 EFCC1Q9HA90 598 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 WDR62O43379 1518 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 NAIPQ13075 1403 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 BIRC2Q13490 618 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 BRD3Q15059 726 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 MICAL1Q8TDZ2 1067 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 MAIP1Q8WWC4 291 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 NAPGQ99747 312 aaPredicted RBP8.02□□□□□ -1.13
COLCA1-205ENST00000620864 PTPRCP08575 1304 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 GNPATO15228 680 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 HCLS1P14317 486 aaPredicted RBP8.02□□□□□ -1.13
COLCA1-205ENST00000620864 EVCP57679 992 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 GIPC1O14908 333 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 METTL24Q5JXM2 366 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 P3H4Q92791 437 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 C1orf115Q9H7X2 142 aa8.02□□□□□ -1.13
COLCA1-205ENST00000620864 GOLGA6BA6NDN3 693 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 RNASELQ05823 741 aaKnown RBP8.01□□□□□ -1.13
COLCA1-205ENST00000620864 ZKSCAN8Q15776 578 aaPredicted RBP8.01□□□□□ -1.13
COLCA1-205ENST00000620864 LRRC23Q53EV4 343 aaPredicted RBP8.01□□□□□ -1.13
COLCA1-205ENST00000620864 TRAPPC3LQ5T215 181 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 ACEP12821 1306 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 ZNF518AQ6AHZ1 1483 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 MINDY4BA8MYZ0 360 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 EIF3DO15371 548 aaKnown RBP eCLIP8.01□□□□□ -1.13
COLCA1-205ENST00000620864 CRCPO75575 148 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 KCNA6P17658 529 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 COG7P83436 770 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 NBPF20Q3BBV1 942 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 RSPH3Q86UC2 560 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 UBL4BQ8N7F7 174 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 MED4Q9NPJ6 270 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 POLE3Q9NRF9 147 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 ELP1O95163 1332 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 CAMSAP2Q08AD1 1489 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 A2MP01023 1474 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 IL2RBP14784 551 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 STAT6P42226 847 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 ECE1P42892 770 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 GNAQP50148 359 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 DEUP1Q05D60 604 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 GOLGA5Q8TBA6 731 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 VEZTQ9HBM0 779 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 SAMM50Q9Y512 469 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 ERCC5P28715 1186 aaPredicted RBP8.01□□□□□ -1.13
COLCA1-205ENST00000620864 INPP1P49441 399 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 SPOUT1Q5T280 376 aaKnown RBP8.01□□□□□ -1.13
COLCA1-205ENST00000620864 ATP2A3Q93084 1043 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 MIS18AQ9NYP9 233 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 SH3BP5O60239 455 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 C8orf74Q6P047 294 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 PPP1R42Q7Z4L9 355 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 ZNF444Q8N0Y2 327 aaPredicted RBP8.01□□□□□ -1.13
COLCA1-205ENST00000620864 TACO1Q9BSH4 297 aaKnown RBP8.01□□□□□ -1.13
COLCA1-205ENST00000620864 NUP58Q9BVL2 599 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 CABP5Q9NP86 173 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 GOLGA8KD6RF30 607 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 STK10O94804 968 aaKnown RBP8.01□□□□□ -1.13
COLCA1-205ENST00000620864 XRCC6P12956 609 aaKnown RBP eCLIP8.01□□□□□ -1.13
COLCA1-205ENST00000620864 HOXA7P31268 230 aaPredicted RBP8.01□□□□□ -1.13
COLCA1-205ENST00000620864 NAA16Q6N069 864 aaPredicted RBP8.01□□□□□ -1.13
COLCA1-205ENST00000620864 PPP1R9AQ9ULJ8 1098 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 F8W031 263 aaPredicted RBP8.01□□□□□ -1.13
COLCA1-205ENST00000620864 IFIT1P09914 478 aaKnown RBP8.01□□□□□ -1.13
COLCA1-205ENST00000620864 TROVE2P10155 538 aaKnown RBP eCLIP8.01□□□□□ -1.13
COLCA1-205ENST00000620864 RRAGBQ5VZM2 374 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 MYD88Q99836 296 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 RAB23Q9ULC3 237 aa8.01□□□□□ -1.13
COLCA1-205ENST00000620864 HSPA1LP34931 641 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 ANKRD20A3Q5VUR7 823 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 ZBTB3Q9H5J0 574 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 CCDC87Q9NVE4 849 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 ERCC3P19447 782 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 SNCBQ16143 134 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 OGFOD1Q8N543 542 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 GSDMBQ8TAX9 411 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 KIFAP3Q92845 792 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 ESRRGP62508 458 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 PLS1Q14651 629 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 SYCE1Q8N0S2 351 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 NAP1L4Q99733 375 aaKnown RBP8□□□□□ -1.13
COLCA1-205ENST00000620864 CNNM2Q9H8M5 875 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 TRIM37O94972 964 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 PDE4BQ07343 736 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 IFT81Q8WYA0 676 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms