RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 LRP2BPQ9P2M1 347 aa13.17□□□□□ -0.3
TARDBP-223ENST00000620632 PCNTO95613 3336 aa13.16□□□□□ -0.3
TARDBP-223ENST00000620632 GOLIM4O00461 696 aa13.16□□□□□ -0.3
TARDBP-223ENST00000620632 BTDP43251 543 aa13.16□□□□□ -0.3
TARDBP-223ENST00000620632 RHBDL3P58872 404 aa13.16□□□□□ -0.3
TARDBP-223ENST00000620632 NFIAQ12857 509 aa13.16□□□□□ -0.3
TARDBP-223ENST00000620632 RASA3Q14644 834 aa13.16□□□□□ -0.3
TARDBP-223ENST00000620632 PI4K2BQ8TCG2 481 aa13.16□□□□□ -0.3
TARDBP-223ENST00000620632 LNPKQ9C0E8 428 aa13.16□□□□□ -0.3
TARDBP-223ENST00000620632 FZD1Q9UP38 647 aa13.16□□□□□ -0.3
TARDBP-223ENST00000620632 GPR75-ASB3A0A0A6YYF3 556 aa13.15□□□□□ -0.3
TARDBP-223ENST00000620632 IDH1O75874 414 aaKnown RBP13.15□□□□□ -0.3
TARDBP-223ENST00000620632 CHGBP05060 677 aa13.15□□□□□ -0.3
TARDBP-223ENST00000620632 NUCB1Q02818 461 aa13.15□□□□□ -0.3
TARDBP-223ENST00000620632 SLFNL1Q499Z3 407 aa13.15□□□□□ -0.3
TARDBP-223ENST00000620632 MOB2Q70IA6 237 aa13.15□□□□□ -0.3
TARDBP-223ENST00000620632 DNAJC5GQ8N7S2 189 aa13.15□□□□□ -0.3
TARDBP-223ENST00000620632 TEPSINQ96N21 525 aa13.15□□□□□ -0.3
TARDBP-223ENST00000620632 TMEM39BQ9GZU3 492 aa13.15□□□□□ -0.3
TARDBP-223ENST00000620632 USP40Q9NVE5 1235 aa13.15□□□□□ -0.3
TARDBP-223ENST00000620632 PAG1Q9NWQ8 432 aa13.15□□□□□ -0.3
TARDBP-223ENST00000620632 FAM198AQ9UFP1 575 aa13.15□□□□□ -0.3
TARDBP-223ENST00000620632 SIPA1L1O43166 1804 aa13.15□□□□□ -0.3
TARDBP-223ENST00000620632 WDHD1O75717 1129 aaPredicted RBP13.14□□□□□ -0.31
TARDBP-223ENST00000620632 MX1P20591 662 aa13.14□□□□□ -0.31
TARDBP-223ENST00000620632 NBPF12Q5TAG4 269 aaPredicted RBP13.14□□□□□ -0.31
TARDBP-223ENST00000620632 NAA16Q6N069 864 aaPredicted RBP13.14□□□□□ -0.31
TARDBP-223ENST00000620632 ZFPM1Q8IX07 1006 aa13.14□□□□□ -0.31
TARDBP-223ENST00000620632 MAGEB6Q8N7X4 407 aa13.14□□□□□ -0.31
TARDBP-223ENST00000620632 DDX4Q9NQI0 724 aaKnown RBP13.14□□□□□ -0.31
TARDBP-223ENST00000620632 TLL2Q9Y6L7 1015 aa13.14□□□□□ -0.31
TARDBP-223ENST00000620632 TTC41PQ6P2S7 1318 aa13.13□□□□□ -0.31
TARDBP-223ENST00000620632 DDX60LQ5H9U9 1706 aaKnown RBP13.13□□□□□ -0.31
TARDBP-223ENST00000620632 MYH1P12882 1939 aa13.13□□□□□ -0.31
TARDBP-223ENST00000620632 TCRBV5S4A2TA0A5A2 114 aa13.13□□□□□ -0.31
TARDBP-223ENST00000620632 MAP4K4O95819 1239 aaPredicted RBP13.13□□□□□ -0.31
TARDBP-223ENST00000620632 GSTO1P78417 241 aa13.13□□□□□ -0.31
TARDBP-223ENST00000620632 SAPCD2Q86UD0 394 aa13.13□□□□□ -0.31
TARDBP-223ENST00000620632 CHD1LQ86WJ1 897 aa13.13□□□□□ -0.31
TARDBP-223ENST00000620632 SLF2Q8IX21 1173 aa13.13□□□□□ -0.31
TARDBP-223ENST00000620632 GBA2Q9HCG7 927 aaPredicted RBP13.13□□□□□ -0.31
TARDBP-223ENST00000620632 AATFQ9NY61 560 aaKnown RBP eCLIP13.13□□□□□ -0.31
TARDBP-223ENST00000620632 PPP2R3BQ9Y5P8 575 aa13.13□□□□□ -0.31
TARDBP-223ENST00000620632 NAV1Q8NEY1 1877 aa13.12□□□□□ -0.31
TARDBP-223ENST00000620632 CENPBP07199 599 aaPredicted RBP13.12□□□□□ -0.31
TARDBP-223ENST00000620632 LDHCP07864 332 aa13.12□□□□□ -0.31
TARDBP-223ENST00000620632 PDE6AP16499 860 aa13.12□□□□□ -0.31
TARDBP-223ENST00000620632 CYP7A1P22680 504 aa13.12□□□□□ -0.31
TARDBP-223ENST00000620632 PDE1AP54750 535 aa13.12□□□□□ -0.31
TARDBP-223ENST00000620632 DYNLL1P63167 89 aaKnown RBP13.12□□□□□ -0.31
TARDBP-223ENST00000620632 TCP10Q12799 353 aa13.12□□□□□ -0.31
TARDBP-223ENST00000620632 TNFAIP1Q13829 316 aa13.12□□□□□ -0.31
TARDBP-223ENST00000620632 TTF1Q15361 905 aaPredicted RBP13.12□□□□□ -0.31
TARDBP-223ENST00000620632 FKBP1CQ5VVH2 108 aa13.12□□□□□ -0.31
TARDBP-223ENST00000620632 FAM83AQ86UY5 434 aa13.12□□□□□ -0.31
TARDBP-223ENST00000620632 SH3RF3Q8TEJ3 882 aaPredicted RBP13.12□□□□□ -0.31
TARDBP-223ENST00000620632 GPATCH3Q96I76 525 aa13.12□□□□□ -0.31
TARDBP-223ENST00000620632 STAP2Q9UGK3 403 aa13.12□□□□□ -0.31
TARDBP-223ENST00000620632 MKRN1Q9UHC7 482 aaKnown RBP13.12□□□□□ -0.31
TARDBP-223ENST00000620632 ABT1Q9ULW3 272 aaKnown RBP13.12□□□□□ -0.31
TARDBP-223ENST00000620632 THSD7BQ9C0I4 1608 aa13.12□□□□□ -0.31
TARDBP-223ENST00000620632 BAZ2AQ9UIF9 1905 aaKnown RBP13.11□□□□□ -0.31
TARDBP-223ENST00000620632 RPAP1Q9BWH6 1393 aaPredicted RBP13.11□□□□□ -0.31
TARDBP-223ENST00000620632 RASSF10A6NK89 507 aa13.11□□□□□ -0.31
TARDBP-223ENST00000620632 PDE4AP27815 886 aa13.11□□□□□ -0.31
TARDBP-223ENST00000620632 ADD2P35612 726 aa13.11□□□□□ -0.31
TARDBP-223ENST00000620632 RGS3P49796 1198 aa13.11□□□□□ -0.31
TARDBP-223ENST00000620632 PPP4CP60510 307 aa13.11□□□□□ -0.31
TARDBP-223ENST00000620632 MAP3K12Q12852 859 aa13.11□□□□□ -0.31
TARDBP-223ENST00000620632 PRKG1Q13976 671 aa13.11□□□□□ -0.31
TARDBP-223ENST00000620632 SLC9C2Q5TAH2 1124 aa13.11□□□□□ -0.31
TARDBP-223ENST00000620632 SH3BP5LQ7L8J4 393 aa13.11□□□□□ -0.31
TARDBP-223ENST00000620632 MIGA1Q8NAN2 632 aa13.11□□□□□ -0.31
TARDBP-223ENST00000620632 IDI2Q9BXS1 227 aa13.11□□□□□ -0.31
TARDBP-223ENST00000620632 TMOD2Q9NZR1 351 aa13.11□□□□□ -0.31
TARDBP-223ENST00000620632 ZNF532Q9HCE3 1301 aa13.11□□□□□ -0.31
TARDBP-223ENST00000620632 UBE2Q2LH0YL09 131 aa13.1□□□□□ -0.31
TARDBP-223ENST00000620632 IGSF3O75054 1194 aa13.1□□□□□ -0.31
TARDBP-223ENST00000620632 GLRX3O76003 335 aaKnown RBP13.1□□□□□ -0.31
TARDBP-223ENST00000620632 SLURP2P0DP57 97 aa13.1□□□□□ -0.31
TARDBP-223ENST00000620632 TNNI2P48788 182 aa13.1□□□□□ -0.31
TARDBP-223ENST00000620632 HUNKP57058 714 aa13.1□□□□□ -0.31
TARDBP-223ENST00000620632 PICALMQ13492 652 aa13.1□□□□□ -0.31
TARDBP-223ENST00000620632 PLEKHM2Q8IWE5 1019 aa13.1□□□□□ -0.31
TARDBP-223ENST00000620632 C2orf69Q8N8R5 385 aa13.1□□□□□ -0.31
TARDBP-223ENST00000620632 FAM151AQ8WW52 585 aa13.1□□□□□ -0.31
TARDBP-223ENST00000620632 RIOK1Q9BRS2 568 aaKnown RBP13.1□□□□□ -0.31
TARDBP-223ENST00000620632 ZBTB47Q9UFB7 747 aaPredicted RBP13.1□□□□□ -0.31
TARDBP-223ENST00000620632 LAMB1P07942 1786 aa13.09□□□□□ -0.31
TARDBP-223ENST00000620632 ATRNL1Q5VV63 1379 aa13.09□□□□□ -0.31
TARDBP-223ENST00000620632 DDTLA6NHG4 134 aaPredicted RBP13.09□□□□□ -0.31
TARDBP-223ENST00000620632 ERC2O15083 957 aa13.09□□□□□ -0.31
TARDBP-223ENST00000620632 VEGFBP49765 207 aa13.09□□□□□ -0.31
TARDBP-223ENST00000620632 DEFB115Q30KQ5 88 aa13.09□□□□□ -0.31
TARDBP-223ENST00000620632 CYP4F22Q6NT55 531 aa13.09□□□□□ -0.31
TARDBP-223ENST00000620632 KBTBD3Q8NAB2 608 aa13.09□□□□□ -0.31
TARDBP-223ENST00000620632 KLRG1Q96E93 195 aa13.09□□□□□ -0.31
TARDBP-223ENST00000620632 ATAD5Q96QE3 1844 aa13.09□□□□□ -0.31
TARDBP-223ENST00000620632 ENTPD3O75355 529 aa13.08□□□□□ -0.32
TARDBP-223ENST00000620632 USP2O75604 605 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms