RNA–Protein interactions for RNA: ENST00000619920.4

PSMC3-213, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-213ENST00000619920 RNF41Q9H4P4 317 aaPredicted RBP18.05■□□□□ 0.48
PSMC3-213ENST00000619920 ANAPC4Q9UJX5 808 aa18.05■□□□□ 0.48
PSMC3-213ENST00000619920 ATP6V1DQ9Y5K8 247 aa18.05■□□□□ 0.48
PSMC3-213ENST00000619920 TIAM2Q8IVF5 1701 aa18.05■□□□□ 0.48
PSMC3-213ENST00000619920 LTBP1Q14766 1721 aa18.05■□□□□ 0.48
PSMC3-213ENST00000619920 LARP1BQ659C4 914 aaKnown RBP18.04■□□□□ 0.48
PSMC3-213ENST00000619920 MFSD6Q6ZSS7 791 aa18.04■□□□□ 0.48
PSMC3-213ENST00000619920 DZIP1Q86YF9 867 aaKnown RBP18.04■□□□□ 0.48
PSMC3-213ENST00000619920 SMARCC2Q8TAQ2 1214 aa18.04■□□□□ 0.48
PSMC3-213ENST00000619920 TMX4Q9H1E5 349 aaPredicted RBP18.04■□□□□ 0.48
PSMC3-213ENST00000619920 MTMR6Q9Y217 621 aa18.04■□□□□ 0.48
PSMC3-213ENST00000619920 C6orf229H3BNL8 230 aa18.04■□□□□ 0.48
PSMC3-213ENST00000619920 DYNLL1P63167 89 aaKnown RBP18.04■□□□□ 0.48
PSMC3-213ENST00000619920 FOXD4L5Q5VV16 416 aaPredicted RBP18.04■□□□□ 0.48
PSMC3-213ENST00000619920 STYK1Q6J9G0 422 aa18.04■□□□□ 0.48
PSMC3-213ENST00000619920 FOXD4L4Q8WXT5 416 aaPredicted RBP18.04■□□□□ 0.48
PSMC3-213ENST00000619920 GPR101Q96P66 508 aaPredicted RBP18.04■□□□□ 0.48
PSMC3-213ENST00000619920 MTA3Q9BTC8 594 aa18.04■□□□□ 0.48
PSMC3-213ENST00000619920 CRNKL1Q9BZJ0 848 aaKnown RBP18.04■□□□□ 0.48
PSMC3-213ENST00000619920 F13A1P00488 732 aa18.03■□□□□ 0.48
PSMC3-213ENST00000619920 LDHCP07864 332 aa18.03■□□□□ 0.48
PSMC3-213ENST00000619920 HMGN5P82970 282 aaKnown RBP18.03■□□□□ 0.48
PSMC3-213ENST00000619920 CTDSPL2Q05D32 466 aa18.03■□□□□ 0.48
PSMC3-213ENST00000619920 PPARAQ07869 468 aa18.03■□□□□ 0.48
PSMC3-213ENST00000619920 CCDC88AQ3V6T2 1871 aa18.03■□□□□ 0.48
PSMC3-213ENST00000619920 MPNDQ8N594 471 aa18.03■□□□□ 0.48
PSMC3-213ENST00000619920 SDR42E1Q8WUS8 393 aa18.03■□□□□ 0.48
PSMC3-213ENST00000619920 LMBRD1Q9NUN5 540 aa18.03■□□□□ 0.48
PSMC3-213ENST00000619920 ANGEL1Q9UNK9 670 aaKnown RBP18.03■□□□□ 0.48
PSMC3-213ENST00000619920 NEDD4P46934 1319 aa18.03■□□□□ 0.48
PSMC3-213ENST00000619920 KIAA1551Q9HCM1 1747 aa18.02■□□□□ 0.48
PSMC3-213ENST00000619920 B4E1Z4 1266 aa18.02■□□□□ 0.48
PSMC3-213ENST00000619920 H0YIN7 160 aa18.02■□□□□ 0.48
PSMC3-213ENST00000619920 SH2B2O14492 632 aaPredicted RBP18.02■□□□□ 0.48
PSMC3-213ENST00000619920 DHX16O60231 1041 aaKnown RBP18.02■□□□□ 0.48
PSMC3-213ENST00000619920 PCP11498 1178 aaKnown RBP18.02■□□□□ 0.48
PSMC3-213ENST00000619920 CYB5R4Q7L1T6 521 aa18.02■□□□□ 0.48
PSMC3-213ENST00000619920 C2CD5Q86YS7 1000 aa18.02■□□□□ 0.48
PSMC3-213ENST00000619920 CERS3Q8IU89 383 aa18.02■□□□□ 0.48
PSMC3-213ENST00000619920 TBC1D22AQ8WUA7 517 aa18.02■□□□□ 0.48
PSMC3-213ENST00000619920 ATP8A2Q9NTI2 1148 aa18.02■□□□□ 0.48
PSMC3-213ENST00000619920 KIF3AQ9Y496 699 aa18.02■□□□□ 0.48
PSMC3-213ENST00000619920 KLF18A0A0U1RQI7 1052 aa18.01■□□□□ 0.47
PSMC3-213ENST00000619920 NSUN7Q8NE18 718 aaKnown RBP18.01■□□□□ 0.47
PSMC3-213ENST00000619920 COA1Q9GZY4 146 aa18.01■□□□□ 0.47
PSMC3-213ENST00000619920 GPHNQ9NQX3 736 aaPredicted RBP18.01■□□□□ 0.47
PSMC3-213ENST00000619920 BRPF3Q9ULD4 1205 aa18.01■□□□□ 0.47
PSMC3-213ENST00000619920 JAG2Q9Y219 1238 aa18.01■□□□□ 0.47
PSMC3-213ENST00000619920 FAM205AQ6ZU69 1335 aa18.01■□□□□ 0.47
PSMC3-213ENST00000619920 COL11A2P13942 1736 aaPredicted RBP18■□□□□ 0.47
PSMC3-213ENST00000619920 LIFRP42702 1097 aa18■□□□□ 0.47
PSMC3-213ENST00000619920 PPP4CP60510 307 aa18■□□□□ 0.47
PSMC3-213ENST00000619920 IGDCC4Q8TDY8 1250 aa18■□□□□ 0.47
PSMC3-213ENST00000619920 AATFQ9NY61 560 aaKnown RBP eCLIP18■□□□□ 0.47
PSMC3-213ENST00000619920 ZSWIM5Q9P217 1185 aa18■□□□□ 0.47
PSMC3-213ENST00000619920 JAK2O60674 1132 aa18■□□□□ 0.47
PSMC3-213ENST00000619920 CTDNEP1O95476 244 aa18■□□□□ 0.47
PSMC3-213ENST00000619920 BAG3O95817 575 aa18■□□□□ 0.47
PSMC3-213ENST00000619920 CCT2P78371 535 aaKnown RBP18■□□□□ 0.47
PSMC3-213ENST00000619920 KLHL40Q2TBA0 621 aa18■□□□□ 0.47
PSMC3-213ENST00000619920 DPP8Q6V1X1 898 aaPredicted RBP18■□□□□ 0.47
PSMC3-213ENST00000619920 SGMS1Q86VZ5 419 aa18■□□□□ 0.47
PSMC3-213ENST00000619920 ZNF622Q969S3 477 aaKnown RBP eCLIP18■□□□□ 0.474e-9■□□□□ 9.9
PSMC3-213ENST00000619920 ZC3H12CQ9C0D7 883 aaKnown RBP18■□□□□ 0.47
PSMC3-213ENST00000619920 NAP1L2Q9ULW6 460 aaPredicted RBP18■□□□□ 0.47
PSMC3-213ENST00000619920 TACC3Q9Y6A5 838 aa18■□□□□ 0.47
PSMC3-213ENST00000619920 VPS37CA5D8V6 355 aaPredicted RBP17.99■□□□□ 0.47
PSMC3-213ENST00000619920 GOLGA8BA8MQT2 603 aa17.99■□□□□ 0.47
PSMC3-213ENST00000619920 MINDY4BA8MYZ0 360 aa17.99■□□□□ 0.47
PSMC3-213ENST00000619920 KDM4AO75164 1064 aa17.99■□□□□ 0.47
PSMC3-213ENST00000619920 PRPF40AO75400 957 aaKnown RBP17.99■□□□□ 0.47
PSMC3-213ENST00000619920 FGRP09769 529 aa17.99■□□□□ 0.47
PSMC3-213ENST00000619920 DEKP35659 375 aaKnown RBP17.99■□□□□ 0.47
PSMC3-213ENST00000619920 SBK1Q52WX2 424 aa17.99■□□□□ 0.47
PSMC3-213ENST00000619920 CTR9Q6PD62 1173 aa17.99■□□□□ 0.47
PSMC3-213ENST00000619920 SLF2Q8IX21 1173 aa17.99■□□□□ 0.47
PSMC3-213ENST00000619920 FAM184AQ8NB25 1140 aa17.99■□□□□ 0.47
PSMC3-213ENST00000619920 CNKSR1Q969H4 720 aa17.99■□□□□ 0.47
PSMC3-213ENST00000619920 EYA3Q99504 573 aa17.99■□□□□ 0.47
PSMC3-213ENST00000619920 NOL10Q9BSC4 688 aaKnown RBP17.99■□□□□ 0.47
PSMC3-213ENST00000619920 DCP1AQ9NPI6 582 aaPredicted RBP17.99■□□□□ 0.47
PSMC3-213ENST00000619920 HPS5Q9UPZ3 1129 aa17.99■□□□□ 0.47
PSMC3-213ENST00000619920 CHD4Q14839 1912 aa17.98■□□□□ 0.47
PSMC3-213ENST00000619920 PTPDC1A2A3K4 754 aa17.98■□□□□ 0.47
PSMC3-213ENST00000619920 SART3Q15020 963 aaKnown RBP17.98■□□□□ 0.47
PSMC3-213ENST00000619920 TMEM67Q5HYA8 995 aa17.98■□□□□ 0.47
PSMC3-213ENST00000619920 TMTC2Q8N394 836 aa17.98■□□□□ 0.47
PSMC3-213ENST00000619920 TMEM87AQ8NBN3 555 aa17.98■□□□□ 0.47
PSMC3-213ENST00000619920 NKX2-3Q8TAU0 364 aa17.98■□□□□ 0.47
PSMC3-213ENST00000619920 FAM163AQ96GL9 167 aaPredicted RBP17.98■□□□□ 0.47
PSMC3-213ENST00000619920 LY9Q9HBG7 655 aa17.98■□□□□ 0.47
PSMC3-213ENST00000619920 INCENPQ9NQS7 918 aa17.98■□□□□ 0.47
PSMC3-213ENST00000619920 SUGT1Q9Y2Z0 365 aa17.98■□□□□ 0.47
PSMC3-213ENST00000619920 DDX49Q9Y6V7 483 aaKnown RBP17.98■□□□□ 0.47
PSMC3-213ENST00000619920 IFIT3O14879 490 aaKnown RBP17.97■□□□□ 0.47
PSMC3-213ENST00000619920 NT5C2P49902 561 aa17.97■□□□□ 0.47
PSMC3-213ENST00000619920 ESR2Q92731 530 aa17.97■□□□□ 0.47
PSMC3-213ENST00000619920 NCOA5Q9HCD5 579 aaKnown RBP17.97■□□□□ 0.47
PSMC3-213ENST00000619920 ARPP21Q9UBL0 812 aaPredicted RBP17.97■□□□□ 0.47
PSMC3-213ENST00000619920 MROH7-TTC4A0A0A0MT08 1334 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms