RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 ENGASEQ8NFI3 743 aa12.01□□□□□ -0.49
TP53-225ENST00000619485 C8orf76Q96K31 380 aa12.01□□□□□ -0.49
TP53-225ENST00000619485 M0R2C6 588 aa12□□□□□ -0.49
TP53-225ENST00000619485 CPLX1O14810 134 aa12□□□□□ -0.49
TP53-225ENST00000619485 SFPQP23246 707 aaKnown RBP eCLIP12□□□□□ -0.49
TP53-225ENST00000619485 LMOD1P29536 600 aaPredicted RBP12□□□□□ -0.49
TP53-225ENST00000619485 SYCP1Q15431 976 aa12□□□□□ -0.49
TP53-225ENST00000619485 TTLL11Q8NHH1 800 aa12□□□□□ -0.49
TP53-225ENST00000619485 KCNV2Q8TDN2 545 aa12□□□□□ -0.49
TP53-225ENST00000619485 SH3TC1Q8TE82 1336 aa12□□□□□ -0.49
TP53-225ENST00000619485 PLEKHG2Q9H7P9 1386 aa12□□□□□ -0.49
TP53-225ENST00000619485 GOLGA8BA8MQT2 603 aa12□□□□□ -0.49
TP53-225ENST00000619485 ITGA6P23229 1130 aa12□□□□□ -0.49
TP53-225ENST00000619485 MARCKSP29966 332 aaPredicted RBP12□□□□□ -0.49
TP53-225ENST00000619485 NBPF11Q86T75 865 aa12□□□□□ -0.49
TP53-225ENST00000619485 FMR1NBQ8N0W7 255 aaPredicted RBP12□□□□□ -0.49
TP53-225ENST00000619485 ZNF397Q8NF99 534 aaPredicted RBP12□□□□□ -0.49
TP53-225ENST00000619485 ST7Q9NRC1 585 aa12□□□□□ -0.49
TP53-225ENST00000619485 TRMT112Q9UI30 125 aaKnown RBP12□□□□□ -0.49
TP53-225ENST00000619485 DENND2AQ9ULE3 1009 aa12□□□□□ -0.49
TP53-225ENST00000619485 MAST3O60307 1309 aa12□□□□□ -0.49
TP53-225ENST00000619485 LOC102724428A0A0B4J2F2 783 aa11.99□□□□□ -0.49
TP53-225ENST00000619485 SLU7O95391 586 aaKnown RBP11.99□□□□□ -0.49
TP53-225ENST00000619485 SIK1P57059 783 aa11.99□□□□□ -0.49
TP53-225ENST00000619485 GSDMDP57764 484 aa11.99□□□□□ -0.49
TP53-225ENST00000619485 EXOSC10Q01780 885 aaKnown RBP11.99□□□□□ -0.49
TP53-225ENST00000619485 SYNE3Q6ZMZ3 975 aa11.99□□□□□ -0.49
TP53-225ENST00000619485 KRT222Q8N1A0 295 aa11.99□□□□□ -0.49
TP53-225ENST00000619485 LINC00116Q8NCU8 138 aa11.99□□□□□ -0.49
TP53-225ENST00000619485 KIAA1468Q9P260 1216 aa11.99□□□□□ -0.49
TP53-225ENST00000619485 ANKRD36CQ5JPF3 1778 aa11.99□□□□□ -0.49
TP53-225ENST00000619485 BCL9LQ86UU0 1499 aa11.99□□□□□ -0.49
TP53-225ENST00000619485 KLF18A0A0U1RQI7 1052 aa11.99□□□□□ -0.49
TP53-225ENST00000619485 IRS4O14654 1257 aaPredicted RBP11.99□□□□□ -0.49
TP53-225ENST00000619485 FOXP2O15409 715 aa11.99□□□□□ -0.49
TP53-225ENST00000619485 SLC3A2P08195 630 aaKnown RBP11.99□□□□□ -0.49
TP53-225ENST00000619485 FDPSP14324 419 aaKnown RBP11.99□□□□□ -0.49
TP53-225ENST00000619485 ERCC6LQ2NKX8 1250 aa11.99□□□□□ -0.49
TP53-225ENST00000619485 ZBTB38Q8NAP3 1195 aaPredicted RBP11.99□□□□□ -0.49
TP53-225ENST00000619485 XAGE2Q96GT9 111 aa11.99□□□□□ -0.49
TP53-225ENST00000619485 DSCC1Q9BVC3 393 aa11.99□□□□□ -0.49
TP53-225ENST00000619485 HELLSQ9NRZ9 838 aa11.99□□□□□ -0.49
TP53-225ENST00000619485 ORC3Q9UBD5 711 aaPredicted RBP11.99□□□□□ -0.49
TP53-225ENST00000619485 ERICH4A6NGS2 130 aa11.98□□□□□ -0.49
TP53-225ENST00000619485 SPTLC2O15270 562 aa11.98□□□□□ -0.49
TP53-225ENST00000619485 PCCAP05165 728 aaPredicted RBP11.98□□□□□ -0.49
TP53-225ENST00000619485 TPM4P67936 248 aa11.98□□□□□ -0.49
TP53-225ENST00000619485 HSP90AA4PQ58FG1 418 aa11.98□□□□□ -0.49
TP53-225ENST00000619485 E4F1Q66K89 784 aaPredicted RBP11.98□□□□□ -0.49
TP53-225ENST00000619485 ADALQ6DHV7 355 aa11.98□□□□□ -0.49
TP53-225ENST00000619485 FAM177A1Q8N128 213 aaPredicted RBP11.98□□□□□ -0.49
TP53-225ENST00000619485 LRRN4CLQ8ND94 238 aa11.98□□□□□ -0.49
TP53-225ENST00000619485 ERO1AQ96HE7 468 aa11.98□□□□□ -0.49
TP53-225ENST00000619485 PPP1R13BQ96KQ4 1090 aa11.98□□□□□ -0.49
TP53-225ENST00000619485 NRDCO43847 1150 aa11.98□□□□□ -0.49
TP53-225ENST00000619485 ZAP70P43403 619 aa11.98□□□□□ -0.49
TP53-225ENST00000619485 GNL2Q13823 731 aaKnown RBP11.98□□□□□ -0.49
TP53-225ENST00000619485 CCDC57Q2TAC2 916 aa11.98□□□□□ -0.49
TP53-225ENST00000619485 ZMYM1Q5SVZ6 1142 aa11.98□□□□□ -0.49
TP53-225ENST00000619485 ARMCX5Q6P1M9 558 aa11.98□□□□□ -0.49
TP53-225ENST00000619485 BICDL1Q6ZP65 573 aa11.98□□□□□ -0.49
TP53-225ENST00000619485 LINC00301Q8NCQ3 95 aa11.98□□□□□ -0.49
TP53-225ENST00000619485 NGLY1Q96IV0 654 aa11.98□□□□□ -0.49
TP53-225ENST00000619485 PALLDQ8WX93 1383 aa11.98□□□□□ -0.49
TP53-225ENST00000619485 VGLL3A8MV65 326 aa11.97□□□□□ -0.49
TP53-225ENST00000619485 RNF113AO15541 343 aaKnown RBP11.97□□□□□ -0.49
TP53-225ENST00000619485 ZNF202O95125 648 aa11.97□□□□□ -0.49
TP53-225ENST00000619485 CSF1RP07333 972 aa11.97□□□□□ -0.49
TP53-225ENST00000619485 RXRAP19793 462 aa11.97□□□□□ -0.49
TP53-225ENST00000619485 EIF5P55010 431 aaKnown RBP11.97□□□□□ -0.49
TP53-225ENST00000619485 GOLGA8FQ08AF8 430 aa11.97□□□□□ -0.49
TP53-225ENST00000619485 GOLGA8DPQ0D2H9 430 aa11.97□□□□□ -0.49
TP53-225ENST00000619485 OSBP2Q969R2 916 aa11.97□□□□□ -0.49
TP53-225ENST00000619485 RTEL1Q9NZ71 1219 aa11.97□□□□□ -0.49
TP53-225ENST00000619485 SALL1Q9NSC2 1324 aa11.97□□□□□ -0.49
TP53-225ENST00000619485 PRC1O43663 620 aa11.97□□□□□ -0.49
TP53-225ENST00000619485 SERPINC1P01008 464 aa11.97□□□□□ -0.49
TP53-225ENST00000619485 ATP1A3P13637 1013 aa11.97□□□□□ -0.49
TP53-225ENST00000619485 IL15P40933 162 aaPredicted RBP11.97□□□□□ -0.49
TP53-225ENST00000619485 CTSWP56202 376 aa11.97□□□□□ -0.49
TP53-225ENST00000619485 KCNG4Q8TDN1 519 aa11.97□□□□□ -0.49
TP53-225ENST00000619485 ZNF274Q96GC6 653 aaPredicted RBP11.97□□□□□ -0.49
TP53-225ENST00000619485 TMX1Q9H3N1 280 aa11.97□□□□□ -0.49
TP53-225ENST00000619485 SRP68Q9UHB9 627 aaKnown RBP11.97□□□□□ -0.49
TP53-225ENST00000619485 LAMA4Q16363 1823 aa11.97□□□□□ -0.49
TP53-225ENST00000619485 CAMTA2O94983 1202 aa11.96□□□□□ -0.49
TP53-225ENST00000619485 IMMTQ16891 758 aaKnown RBP11.96□□□□□ -0.49
TP53-225ENST00000619485 ATL3Q6DD88 541 aa11.96□□□□□ -0.49
TP53-225ENST00000619485 RALYLQ86SE5 291 aaKnown RBP11.96□□□□□ -0.49
TP53-225ENST00000619485 CCDC87Q9NVE4 849 aa11.96□□□□□ -0.49
TP53-225ENST00000619485 DNAI1Q9UI46 699 aa11.96□□□□□ -0.49
TP53-225ENST00000619485 RIPOR2Q9Y4F9 1068 aa11.96□□□□□ -0.49
TP53-225ENST00000619485 MORC2Q9Y6X9 1032 aaPredicted RBP11.96□□□□□ -0.49
TP53-225ENST00000619485 NWD2Q9ULI1 1742 aa11.96□□□□□ -0.5
TP53-225ENST00000619485 KIF28PB7ZC32 967 aa11.96□□□□□ -0.5
TP53-225ENST00000619485 PFKFB1P16118 471 aa11.96□□□□□ -0.5
TP53-225ENST00000619485 MCAMP43121 646 aa11.96□□□□□ -0.5
TP53-225ENST00000619485 PHKA1P46020 1223 aa11.96□□□□□ -0.5
TP53-225ENST00000619485 IFIT5Q13325 482 aaKnown RBP11.96□□□□□ -0.5
TP53-225ENST00000619485 CFAP100Q494V2 611 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms