RNA–Protein interactions for RNA: ENST00000619259.4

SEM1-220, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 462 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-220ENST00000619259 DCAF11Q8TEB1 546 aa6.59□□□□□ -1.35
SEM1-220ENST00000619259 JARID2Q92833 1246 aaPredicted RBP6.59□□□□□ -1.35
SEM1-220ENST00000619259 TGIF2Q9GZN2 237 aa6.59□□□□□ -1.35
SEM1-220ENST00000619259 NOP53Q9NZM5 478 aaKnown RBP6.59□□□□□ -1.35
SEM1-220ENST00000619259 DDX41Q9UJV9 622 aaKnown RBP6.59□□□□□ -1.35
SEM1-220ENST00000619259 RAPGEF2Q9Y4G8 1499 aa6.59□□□□□ -1.36
SEM1-220ENST00000619259 LAMC3Q9Y6N6 1575 aa6.58□□□□□ -1.36
SEM1-220ENST00000619259 DEAF1O75398 565 aaPredicted RBP6.58□□□□□ -1.36
SEM1-220ENST00000619259 PF4P02776 101 aa6.58□□□□□ -1.36
SEM1-220ENST00000619259 GSTP1P09211 210 aaKnown RBP6.58□□□□□ -1.36
SEM1-220ENST00000619259 RACK1P63244 317 aaKnown RBP6.58□□□□□ -1.36
SEM1-220ENST00000619259 DUOXA2Q1HG44 320 aa6.58□□□□□ -1.36
SEM1-220ENST00000619259 SNAP47Q5SQN1 464 aa6.58□□□□□ -1.36
SEM1-220ENST00000619259 DIEXFQ68CQ4 756 aaKnown RBP6.58□□□□□ -1.36
SEM1-220ENST00000619259 LLGL2Q6P1M3 1020 aa6.58□□□□□ -1.36
SEM1-220ENST00000619259 FBXO11Q86XK2 927 aa6.58□□□□□ -1.36
SEM1-220ENST00000619259 FMR1NBQ8N0W7 255 aaPredicted RBP6.58□□□□□ -1.36
SEM1-220ENST00000619259 ACSBG1Q96GR2 724 aa6.58□□□□□ -1.36
SEM1-220ENST00000619259 ACBD3Q9H3P7 528 aa6.58□□□□□ -1.36
SEM1-220ENST00000619259 CAPN10Q9HC96 672 aa6.58□□□□□ -1.36
SEM1-220ENST00000619259 CYP8B1Q9UNU6 501 aa6.58□□□□□ -1.36
SEM1-220ENST00000619259 FANCD2Q9BXW9 1451 aa6.58□□□□□ -1.36
SEM1-220ENST00000619259 ECEL1O95672 775 aa6.57□□□□□ -1.36
SEM1-220ENST00000619259 EIF4A3P38919 411 aaKnown RBP6.57□□□□□ -1.36
SEM1-220ENST00000619259 RPS26P62854 115 aaKnown RBP6.57□□□□□ -1.36
SEM1-220ENST00000619259 RAD51AP2Q09MP3 1159 aa6.57□□□□□ -1.36
SEM1-220ENST00000619259 CAMK2GQ13555 558 aaPredicted RBP6.57□□□□□ -1.36
SEM1-220ENST00000619259 FOXD4L6Q3SYB3 417 aaPredicted RBP6.57□□□□□ -1.36
SEM1-220ENST00000619259 FOXD4L3Q6VB84 417 aaPredicted RBP6.57□□□□□ -1.36
SEM1-220ENST00000619259 AGMOQ6ZNB7 445 aa6.57□□□□□ -1.36
SEM1-220ENST00000619259 PHC3Q8NDX5 983 aa6.57□□□□□ -1.36
SEM1-220ENST00000619259 SCARF2Q96GP6 870 aaPredicted RBP6.57□□□□□ -1.36
SEM1-220ENST00000619259 SPON2Q9BUD6 331 aa6.57□□□□□ -1.36
SEM1-220ENST00000619259 MIR1-1HGQ9H1L0 117 aa6.57□□□□□ -1.36
SEM1-220ENST00000619259 RAD18Q9NS91 495 aa6.57□□□□□ -1.36
SEM1-220ENST00000619259 KCNK4Q9NYG8 393 aa6.57□□□□□ -1.36
SEM1-220ENST00000619259 INPP5FQ9Y2H2 1132 aa6.57□□□□□ -1.36
SEM1-220ENST00000619259 PCDHB5Q9Y5E4 795 aa6.57□□□□□ -1.36
SEM1-220ENST00000619259 DNMBPQ6XZF7 1577 aa6.57□□□□□ -1.36
SEM1-220ENST00000619259 FAM181BA6NEQ2 426 aa6.56□□□□□ -1.36
SEM1-220ENST00000619259 TFE3P19532 575 aaPredicted RBP6.56□□□□□ -1.36
SEM1-220ENST00000619259 LORP23490 312 aaPredicted RBP6.56□□□□□ -1.36
SEM1-220ENST00000619259 TNNI2P48788 182 aa6.56□□□□□ -1.36
SEM1-220ENST00000619259 ZC3H6P61129 1189 aaKnown RBP6.56□□□□□ -1.36
SEM1-220ENST00000619259 HNRNPUQ00839 825 aaKnown RBP eCLIP6.56□□□□□ -1.36
SEM1-220ENST00000619259 GNL2Q13823 731 aaKnown RBP6.56□□□□□ -1.36
SEM1-220ENST00000619259 SEPT6Q14141 434 aa6.56□□□□□ -1.36
SEM1-220ENST00000619259 RASIP1Q5U651 963 aa6.56□□□□□ -1.36
SEM1-220ENST00000619259 KIAA0825Q8IV33 1275 aa6.56□□□□□ -1.36
SEM1-220ENST00000619259 GOLM1Q8NBJ4 401 aa6.56□□□□□ -1.36
SEM1-220ENST00000619259 UBASH3BQ8TF42 649 aa6.56□□□□□ -1.36
SEM1-220ENST00000619259 CLIP1P30622 1438 aa6.56□□□□□ -1.36
SEM1-220ENST00000619259 FGD5Q6ZNL6 1462 aa6.55□□□□□ -1.36
SEM1-220ENST00000619259 ADAM11O75078 769 aa6.55□□□□□ -1.36
SEM1-220ENST00000619259 LIG1P18858 919 aa6.55□□□□□ -1.36
SEM1-220ENST00000619259 LMNB2Q03252 620 aa6.55□□□□□ -1.36
SEM1-220ENST00000619259 GRIK4Q16099 956 aa6.55□□□□□ -1.36
SEM1-220ENST00000619259 NAALADL2Q58DX5 795 aa6.55□□□□□ -1.36
SEM1-220ENST00000619259 HP1BP3Q5SSJ5 553 aaPredicted RBP6.55□□□□□ -1.36
SEM1-220ENST00000619259 MPRIPQ6WCQ1 1025 aa6.55□□□□□ -1.36
SEM1-220ENST00000619259 ACAD11Q709F0 780 aa6.55□□□□□ -1.36
SEM1-220ENST00000619259 ZNF296Q8WUU4 475 aaPredicted RBP6.55□□□□□ -1.36
SEM1-220ENST00000619259 ADAMTS1Q9UHI8 967 aa6.55□□□□□ -1.36
SEM1-220ENST00000619259 USP21Q9UK80 565 aa6.55□□□□□ -1.36
SEM1-220ENST00000619259 SUPT16HQ9Y5B9 1047 aaKnown RBP6.55□□□□□ -1.36
SEM1-220ENST00000619259 VPS8Q8N3P4 1428 aa6.55□□□□□ -1.36
SEM1-220ENST00000619259 ABCA10Q8WWZ4 1543 aa6.55□□□□□ -1.36
SEM1-220ENST00000619259 LOC100289279A0A1B0GTE1 492 aa6.54□□□□□ -1.36
SEM1-220ENST00000619259 DLL1O00548 723 aa6.54□□□□□ -1.36
SEM1-220ENST00000619259 CTSBP07858 339 aa6.54□□□□□ -1.36
SEM1-220ENST00000619259 ELNP15502 786 aa6.54□□□□□ -1.36
SEM1-220ENST00000619259 PAK2Q13177 524 aa6.54□□□□□ -1.36
SEM1-220ENST00000619259 FBXL19Q6PCT2 694 aa6.54□□□□□ -1.36
SEM1-220ENST00000619259 IGF2-ASQ6U949 168 aa6.54□□□□□ -1.36
SEM1-220ENST00000619259 ILDR2Q71H61 639 aa6.54□□□□□ -1.36
SEM1-220ENST00000619259 PDZD3Q86UT5 571 aa6.54□□□□□ -1.36
SEM1-220ENST00000619259 GPBAR1Q8TDU6 330 aa6.54□□□□□ -1.36
SEM1-220ENST00000619259 RUSC1Q9BVN2 902 aa6.54□□□□□ -1.36
SEM1-220ENST00000619259 CCDC86Q9H6F5 360 aaKnown RBP6.54□□□□□ -1.36
SEM1-220ENST00000619259 PCDHA4Q9UN74 947 aa6.54□□□□□ -1.36
SEM1-220ENST00000619259 TOPBP1Q92547 1522 aa6.54□□□□□ -1.36
SEM1-220ENST00000619259 TLR3O15455 904 aaKnown RBP6.53□□□□□ -1.36
SEM1-220ENST00000619259 TRIM37O94972 964 aa6.53□□□□□ -1.36
SEM1-220ENST00000619259 BPNT1O95861 308 aa6.53□□□□□ -1.36
SEM1-220ENST00000619259 APBA3O96018 575 aa6.53□□□□□ -1.36
SEM1-220ENST00000619259 ZNF252P-AS1Q0IIN9 211 aa6.53□□□□□ -1.36
SEM1-220ENST00000619259 EXOSC6Q5RKV6 272 aaKnown RBP6.53□□□□□ -1.36
SEM1-220ENST00000619259 SHISA2Q6UWI4 295 aa6.53□□□□□ -1.36
SEM1-220ENST00000619259 BNC2Q6ZN30 1099 aaPredicted RBP6.53□□□□□ -1.36
SEM1-220ENST00000619259 VPS37DQ86XT2 251 aa6.53□□□□□ -1.36
SEM1-220ENST00000619259 TRIM42Q8IWZ5 723 aa6.53□□□□□ -1.36
SEM1-220ENST00000619259 RHOVQ96L33 236 aa6.53□□□□□ -1.36
SEM1-220ENST00000619259 CUX2O14529 1486 aa6.53□□□□□ -1.36
SEM1-220ENST00000619259 PDS5BQ9NTI5 1447 aa6.52□□□□□ -1.37
SEM1-220ENST00000619259 WISP1O95388 367 aa6.52□□□□□ -1.37
SEM1-220ENST00000619259 F13A1P00488 732 aa6.52□□□□□ -1.37
SEM1-220ENST00000619259 SLFN14P0C7P3 912 aa6.52□□□□□ -1.37
SEM1-220ENST00000619259 SPATA31C1P0DKV0 1188 aa6.52□□□□□ -1.37
SEM1-220ENST00000619259 AKAP4Q5JQC9 854 aa6.52□□□□□ -1.37
SEM1-220ENST00000619259 NUTM2GQ5VZR2 741 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms