RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 EYA2O00167 538 aa18.22■□□□□ 0.51
SEMA3B-214ENST00000619119 IQCB1Q15051 598 aa18.22■□□□□ 0.51
SEMA3B-214ENST00000619119 ZRSR1Q15695 479 aaKnown RBP18.22■□□□□ 0.51
SEMA3B-214ENST00000619119 RNF217Q8TC41 542 aa18.22■□□□□ 0.51
SEMA3B-214ENST00000619119 PDE11AQ9HCR9 933 aa18.22■□□□□ 0.51
SEMA3B-214ENST00000619119 TRMT112Q9UI30 125 aaKnown RBP18.22■□□□□ 0.51
SEMA3B-214ENST00000619119 THRAP3Q9Y2W1 955 aaKnown RBP18.22■□□□□ 0.51
SEMA3B-214ENST00000619119 SARM1Q6SZW1 724 aa18.22■□□□□ 0.51
SEMA3B-214ENST00000619119 NLRP10Q86W26 655 aa18.22■□□□□ 0.51
SEMA3B-214ENST00000619119 CEP89Q96ST8 783 aa18.22■□□□□ 0.51
SEMA3B-214ENST00000619119 CCDC189A1A4V9 331 aa18.21■□□□□ 0.51
SEMA3B-214ENST00000619119 EFCAB8A8MWE9 144 aa18.21■□□□□ 0.51
SEMA3B-214ENST00000619119 ETF1P62495 437 aaKnown RBP18.21■□□□□ 0.51
SEMA3B-214ENST00000619119 HSP90AB3PQ58FF7 597 aa18.21■□□□□ 0.51
SEMA3B-214ENST00000619119 FAM182BQ5T319 152 aa18.21■□□□□ 0.51
SEMA3B-214ENST00000619119 TADA2BQ86TJ2 420 aa18.21■□□□□ 0.51
SEMA3B-214ENST00000619119 RPAINQ86UA6 219 aa18.21■□□□□ 0.51
SEMA3B-214ENST00000619119 COL15A1P39059 1388 aa18.21■□□□□ 0.51
SEMA3B-214ENST00000619119 LOC102724428A0A0B4J2F2 783 aa18.21■□□□□ 0.51
SEMA3B-214ENST00000619119 SIK1P57059 783 aa18.21■□□□□ 0.51
SEMA3B-214ENST00000619119 LRCH2Q5VUJ6 765 aa18.21■□□□□ 0.51
SEMA3B-214ENST00000619119 ZBTB38Q8NAP3 1195 aaPredicted RBP18.21■□□□□ 0.51
SEMA3B-214ENST00000619119 SPATA32Q96LK8 384 aa18.21■□□□□ 0.51
SEMA3B-214ENST00000619119 IL15P40933 162 aaPredicted RBP18.2■□□□□ 0.5
SEMA3B-214ENST00000619119 PCCAP05165 728 aaPredicted RBP18.2■□□□□ 0.5
SEMA3B-214ENST00000619119 TPM1P09493 284 aa18.2■□□□□ 0.5
SEMA3B-214ENST00000619119 LONRF2Q1L5Z9 754 aa18.2■□□□□ 0.5
SEMA3B-214ENST00000619119 ATP5JP18859 108 aa18.2■□□□□ 0.5
SEMA3B-214ENST00000619119 ISM2Q6H9L7 571 aa18.2■□□□□ 0.5
SEMA3B-214ENST00000619119 CDC37L1Q7L3B6 337 aa18.2■□□□□ 0.5
SEMA3B-214ENST00000619119 ZNF589Q86UQ0 364 aaPredicted RBP18.2■□□□□ 0.5
SEMA3B-214ENST00000619119 SGSM3Q96HU1 749 aa18.2■□□□□ 0.5
SEMA3B-214ENST00000619119 PARD6BQ9BYG5 372 aa18.2■□□□□ 0.5
SEMA3B-214ENST00000619119 FAN1Q9Y2M0 1017 aa18.2■□□□□ 0.5
SEMA3B-214ENST00000619119 TJP1Q07157 1748 aa18.19■□□□□ 0.5
SEMA3B-214ENST00000619119 CRKLP46109 303 aaKnown RBP18.19■□□□□ 0.5
SEMA3B-214ENST00000619119 GSDMDP57764 484 aa18.19■□□□□ 0.5
SEMA3B-214ENST00000619119 ITPK1Q13572 414 aa18.19■□□□□ 0.5
SEMA3B-214ENST00000619119 EFCAB13Q8IY85 973 aa18.19■□□□□ 0.5
SEMA3B-214ENST00000619119 DOT1LQ8TEK3 1739 aa18.19■□□□□ 0.5
SEMA3B-214ENST00000619119 N4BP1O75113 896 aaKnown RBP18.19■□□□□ 0.5
SEMA3B-214ENST00000619119 PHACTR2O75167 634 aa18.19■□□□□ 0.5
SEMA3B-214ENST00000619119 IFIT5Q13325 482 aaKnown RBP18.19■□□□□ 0.5
SEMA3B-214ENST00000619119 SEC62Q99442 399 aaKnown RBP18.19■□□□□ 0.5
SEMA3B-214ENST00000619119 GREM2Q9H772 168 aa18.19■□□□□ 0.5
SEMA3B-214ENST00000619119 SCP2P22307 547 aa18.18■□□□□ 0.5
SEMA3B-214ENST00000619119 LRRFIP1Q32MZ4 808 aaKnown RBP18.18■□□□□ 0.5
SEMA3B-214ENST00000619119 ADCK5Q3MIX3 580 aa18.18■□□□□ 0.5
SEMA3B-214ENST00000619119 CCDC129Q6ZRS4 1044 aa18.18■□□□□ 0.5
SEMA3B-214ENST00000619119 TMC6Q7Z403 805 aa18.18■□□□□ 0.5
SEMA3B-214ENST00000619119 NECAB1Q8N987 351 aa18.18■□□□□ 0.5
SEMA3B-214ENST00000619119 IRS4O14654 1257 aaPredicted RBP18.18■□□□□ 0.5
SEMA3B-214ENST00000619119 TRIM28Q13263 835 aaKnown RBP18.18■□□□□ 0.5
SEMA3B-214ENST00000619119 SMIM5Q71RC9 77 aa18.18■□□□□ 0.5
SEMA3B-214ENST00000619119 PTF1AQ7RTS3 328 aa18.18■□□□□ 0.5
SEMA3B-214ENST00000619119 CEP120Q8N960 986 aa18.18■□□□□ 0.5
SEMA3B-214ENST00000619119 CEP126Q9P2H0 1117 aa18.18■□□□□ 0.5
SEMA3B-214ENST00000619119 SFPQP23246 707 aaKnown RBP eCLIP18.18■□□□□ 0.5
SEMA3B-214ENST00000619119 IL6STP40189 918 aaPredicted RBP18.18■□□□□ 0.5
SEMA3B-214ENST00000619119 LIG3P49916 1009 aa18.18■□□□□ 0.5
SEMA3B-214ENST00000619119 LARP1BQ659C4 914 aaKnown RBP18.18■□□□□ 0.5
SEMA3B-214ENST00000619119 LRRC31Q6UY01 552 aa18.18■□□□□ 0.5
SEMA3B-214ENST00000619119 TTC14Q96N46 770 aa18.18■□□□□ 0.5
SEMA3B-214ENST00000619119 KCND1Q9NSA2 647 aa18.18■□□□□ 0.5
SEMA3B-214ENST00000619119 RBM8AQ9Y5S9 174 aaKnown RBP18.18■□□□□ 0.5
SEMA3B-214ENST00000619119 IRF6O14896 467 aa18.17■□□□□ 0.5
SEMA3B-214ENST00000619119 FANCGO15287 622 aa18.17■□□□□ 0.5
SEMA3B-214ENST00000619119 INTS5Q6P9B9 1019 aaKnown RBP18.17■□□□□ 0.5
SEMA3B-214ENST00000619119 RBM43Q6ZSC3 357 aaKnown RBP18.17■□□□□ 0.5
SEMA3B-214ENST00000619119 FAM43BQ6ZT52 329 aaPredicted RBP18.17■□□□□ 0.5
SEMA3B-214ENST00000619119 KAT2BQ92831 832 aa18.17■□□□□ 0.5
SEMA3B-214ENST00000619119 JAKMIP1Q96N16 626 aaKnown RBP18.17■□□□□ 0.5
SEMA3B-214ENST00000619119 SNRKQ9NRH2 765 aa18.17■□□□□ 0.5
SEMA3B-214ENST00000619119 CCDC87Q9NVE4 849 aa18.17■□□□□ 0.5
SEMA3B-214ENST00000619119 UBN2Q6ZU65 1347 aa18.17■□□□□ 0.5
SEMA3B-214ENST00000619119 CCDC196A0A1B0GTZ2 297 aa18.17■□□□□ 0.5
SEMA3B-214ENST00000619119 PSDA5PKW4 1024 aaPredicted RBP18.17■□□□□ 0.5
SEMA3B-214ENST00000619119 GPR161Q8N6U8 529 aaKnown RBP18.17■□□□□ 0.5
SEMA3B-214ENST00000619119 MKRN1Q9UHC7 482 aaKnown RBP18.17■□□□□ 0.5
SEMA3B-214ENST00000619119 AKAP2Q9Y2D5 859 aa18.17■□□□□ 0.5
SEMA3B-214ENST00000619119 CPP00450 1065 aa18.16■□□□□ 0.5
SEMA3B-214ENST00000619119 ITGA6P23229 1130 aa18.16■□□□□ 0.5
SEMA3B-214ENST00000619119 ADORA1P30542 326 aa18.16■□□□□ 0.5
SEMA3B-214ENST00000619119 GRIPAP1Q4V328 841 aa18.16■□□□□ 0.5
SEMA3B-214ENST00000619119 ARMCX5Q6P1M9 558 aa18.16■□□□□ 0.5
SEMA3B-214ENST00000619119 AOPEPQ8N6M6 819 aa18.16■□□□□ 0.5
SEMA3B-214ENST00000619119 SRRTQ9BXP5 876 aaKnown RBP18.16■□□□□ 0.5
SEMA3B-214ENST00000619119 ZSWIM4Q9H7M6 989 aa18.16■□□□□ 0.5
SEMA3B-214ENST00000619119 PALLDQ8WX93 1383 aa18.16■□□□□ 0.5
SEMA3B-214ENST00000619119 HIP1O00291 1037 aa18.16■□□□□ 0.5
SEMA3B-214ENST00000619119 PHLPP2Q6ZVD8 1323 aa18.16■□□□□ 0.5
SEMA3B-214ENST00000619119 APOBRQ0VD83 1088 aa18.16■□□□□ 0.5
SEMA3B-214ENST00000619119 COL9A3Q14050 684 aaPredicted RBP18.16■□□□□ 0.5
SEMA3B-214ENST00000619119 FKBP4Q02790 459 aaKnown RBP eCLIP18.15■□□□□ 0.5
SEMA3B-214ENST00000619119 LDHAL6AQ6ZMR3 332 aa18.15■□□□□ 0.5
SEMA3B-214ENST00000619119 BARGINQ6ZT62 677 aa18.15■□□□□ 0.5
SEMA3B-214ENST00000619119 TTLL11Q8NHH1 800 aa18.15■□□□□ 0.5
SEMA3B-214ENST00000619119 HAUS7Q99871 368 aa18.15■□□□□ 0.5
SEMA3B-214ENST00000619119 PARP3Q9Y6F1 533 aa18.15■□□□□ 0.5
SEMA3B-214ENST00000619119 SLIT2O94813 1529 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms