RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 FBXO41Q8TF61 875 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 DDX12PQ92771 950 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 TTC14Q96N46 770 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 SDF4Q9BRK5 362 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 KIF2AO00139 706 aaPredicted RBP8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 CTAGE5O15320 804 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 PRR29P0C7W0 189 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 LIG1P18858 919 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 HMGB2P26583 209 aaKnown RBP8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 ADORA1P30542 326 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 POTEAQ6S8J7 498 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 TTC6Q86TZ1 520 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 ANKRD18AQ8IVF6 992 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 KRT222Q8N1A0 295 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 CHMP4CQ96CF2 233 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 TCEANC2Q96MN5 208 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 GPR108Q9NPR9 543 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 USP42Q9H9J4 1324 aaKnown RBP8.11□□□□□ -1.11
SRGAP3-213ENST00000618999 LARGE1O95461 756 aa8.11□□□□□ -1.11
SRGAP3-213ENST00000618999 LRMPQ12912 555 aa8.11□□□□□ -1.11
SRGAP3-213ENST00000618999 ME3Q16798 604 aa8.11□□□□□ -1.11
SRGAP3-213ENST00000618999 CDC37L1Q7L3B6 337 aa8.11□□□□□ -1.11
SRGAP3-213ENST00000618999 CLSTN2Q9H4D0 955 aa8.11□□□□□ -1.11
SRGAP3-213ENST00000618999 RIPOR2Q9Y4F9 1068 aa8.11□□□□□ -1.11
SRGAP3-213ENST00000618999 STX1AQ16623 288 aa8.11□□□□□ -1.11
SRGAP3-213ENST00000618999 ZSCAN25Q6NSZ9 544 aa8.11□□□□□ -1.11
SRGAP3-213ENST00000618999 DDX11Q96FC9 970 aa8.11□□□□□ -1.11
SRGAP3-213ENST00000618999 ZNF396Q96N95 335 aaPredicted RBP8.11□□□□□ -1.11
SRGAP3-213ENST00000618999 ZSWIM6Q9HCJ5 1215 aa8.11□□□□□ -1.11
SRGAP3-213ENST00000618999 ARGLU1Q9NWB6 273 aaPredicted RBP8.11□□□□□ -1.11
SRGAP3-213ENST00000618999 MRVI1Q9Y6F6 885 aa8.11□□□□□ -1.11
SRGAP3-213ENST00000618999 POM121CA8CG34 1229 aa8.11□□□□□ -1.11
SRGAP3-213ENST00000618999 PDE8BO95263 885 aa8.11□□□□□ -1.11
SRGAP3-213ENST00000618999 SKILP12757 684 aa8.11□□□□□ -1.11
SRGAP3-213ENST00000618999 GABPB1Q06547 395 aaPredicted RBP8.11□□□□□ -1.11
SRGAP3-213ENST00000618999 NFIXQ14938 502 aa8.11□□□□□ -1.11
SRGAP3-213ENST00000618999 CNBD1Q8NA66 436 aa8.11□□□□□ -1.11
SRGAP3-213ENST00000618999 ANO10Q9NW15 660 aa8.11□□□□□ -1.11
SRGAP3-213ENST00000618999 TRMT1Q9NXH9 659 aaKnown RBP8.11□□□□□ -1.11
SRGAP3-213ENST00000618999 SNAP23O00161 211 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 SMC2O95347 1197 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 ME1P48163 572 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 PTH1RQ03431 593 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 SF3B2Q13435 895 aaKnown RBP8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 KCNF1Q9H3M0 494 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 HMG20BQ9P0W2 317 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 MYH14Q7Z406 1995 aaKnown RBP8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 ELP1O95163 1332 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 NMIQ13287 307 aaPredicted RBP8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 ADCK5Q3MIX3 580 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 ZNF397Q8NF99 534 aaPredicted RBP8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 FAM227BQ96M60 508 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 PAG1Q9NWQ8 432 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 N4BP2Q86UW6 1770 aaPredicted RBP8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 THSD7AQ9UPZ6 1657 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 MROH5Q6ZUA9 1318 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 TJP1Q07157 1748 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 SLC5A1P13866 664 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 PSEN1P49768 467 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 TEX35Q5T0J7 233 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 VPS37DQ86XT2 251 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 MNS1Q8NEH6 495 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 LEO1Q8WVC0 666 aaPredicted RBP8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 IL25Q9H293 177 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 ZSCAN16Q9H4T2 348 aaPredicted RBP8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 GSDMDP57764 484 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 PDAP1Q13442 181 aaKnown RBP8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 SYCP1Q15431 976 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 WASHC4Q2M389 1173 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 C3orf67Q6ZVT6 689 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 HAUS7Q99871 368 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 TPCN1Q9ULQ1 816 aa8.1□□□□□ -1.11
SRGAP3-213ENST00000618999 DHX8Q14562 1220 aaKnown RBP8.09□□□□□ -1.11
SRGAP3-213ENST00000618999 PUM3Q15397 648 aaKnown RBP8.09□□□□□ -1.11
SRGAP3-213ENST00000618999 SLC27A2O14975 620 aa8.09□□□□□ -1.11
SRGAP3-213ENST00000618999 RPS8P62241 208 aaKnown RBP8.09□□□□□ -1.11
SRGAP3-213ENST00000618999 NCBP1Q09161 790 aaKnown RBP8.09□□□□□ -1.11
SRGAP3-213ENST00000618999 ANKRD7Q92527 254 aa8.09□□□□□ -1.11
SRGAP3-213ENST00000618999 LPIN2Q92539 896 aa8.09□□□□□ -1.11
SRGAP3-213ENST00000618999 BRF1Q92994 677 aa8.09□□□□□ -1.11
SRGAP3-213ENST00000618999 FUCA2Q9BTY2 467 aa8.09□□□□□ -1.11
SRGAP3-213ENST00000618999 NRBP1Q9UHY1 535 aa8.09□□□□□ -1.11
SRGAP3-213ENST00000618999 SERPINB2P05120 415 aa8.09□□□□□ -1.12
SRGAP3-213ENST00000618999 ST5P78524 1137 aa8.09□□□□□ -1.12
SRGAP3-213ENST00000618999 CHRNDQ07001 517 aa8.09□□□□□ -1.12
SRGAP3-213ENST00000618999 LRRFIP1Q32MZ4 808 aaKnown RBP8.09□□□□□ -1.12
SRGAP3-213ENST00000618999 CCAR1Q8IX12 1150 aaKnown RBP8.09□□□□□ -1.12
SRGAP3-213ENST00000618999 TDRD7Q8NHU6 1098 aaKnown RBP8.09□□□□□ -1.12
SRGAP3-213ENST00000618999 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.09□□□□□ -1.12
SRGAP3-213ENST00000618999 V9GYY5 206 aaPredicted RBP8.09□□□□□ -1.12
SRGAP3-213ENST00000618999 EP400Q96L91 3159 aa8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 ERICH4A6NGS2 130 aa8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 CCDC69A6NI79 296 aa8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 PLSCR1O15162 318 aa8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 CCP110O43303 1012 aa8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 GYS1P13807 737 aa8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 SF3B3Q15393 1217 aaKnown RBP8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 KBTBD3Q8NAB2 608 aa8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 RPGRQ92834 1020 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms