RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 CEP57L1Q8IYX8 460 aa22.39■■□□□ 1.17
PCDHGB3-202ENST00000618934 SEC31BQ9NQW1 1179 aa22.39■■□□□ 1.17
PCDHGB3-202ENST00000618934 FAM217BQ9NTX9 383 aaPredicted RBP22.39■■□□□ 1.17
PCDHGB3-202ENST00000618934 ZNF34Q8IZ26 560 aa22.38■■□□□ 1.17
PCDHGB3-202ENST00000618934 RANBP6O60518 1105 aaKnown RBP22.38■■□□□ 1.17
PCDHGB3-202ENST00000618934 KRT40Q6A162 431 aa22.38■■□□□ 1.17
PCDHGB3-202ENST00000618934 ISM2Q6H9L7 571 aa22.38■■□□□ 1.17
PCDHGB3-202ENST00000618934 NBPF11Q86T75 865 aa22.38■■□□□ 1.17
PCDHGB3-202ENST00000618934 PFKFB1P16118 471 aa22.37■■□□□ 1.17
PCDHGB3-202ENST00000618934 RASGRF1Q13972 1273 aa22.37■■□□□ 1.17
PCDHGB3-202ENST00000618934 VPS37DQ86XT2 251 aa22.37■■□□□ 1.17
PCDHGB3-202ENST00000618934 MAGEB6Q8N7X4 407 aa22.37■■□□□ 1.17
PCDHGB3-202ENST00000618934 LY9Q9HBG7 655 aa22.37■■□□□ 1.17
PCDHGB3-202ENST00000618934 DISP2A7MBM2 1401 aa22.37■■□□□ 1.17
PCDHGB3-202ENST00000618934 PUM3Q15397 648 aaKnown RBP22.37■■□□□ 1.17
PCDHGB3-202ENST00000618934 NTRK3Q16288 839 aa22.37■■□□□ 1.17
PCDHGB3-202ENST00000618934 SUSD4Q5VX71 490 aa22.37■■□□□ 1.17
PCDHGB3-202ENST00000618934 AIDAQ96BJ3 306 aa22.37■■□□□ 1.17
PCDHGB3-202ENST00000618934 ARMT1Q9H993 441 aa22.37■■□□□ 1.17
PCDHGB3-202ENST00000618934 PRKAB2O43741 272 aa22.36■■□□□ 1.17
PCDHGB3-202ENST00000618934 TNNT1P13805 278 aa22.36■■□□□ 1.17
PCDHGB3-202ENST00000618934 CHAF1AQ13111 956 aaPredicted RBP22.36■■□□□ 1.17
PCDHGB3-202ENST00000618934 SPATA5Q8NB90 893 aa22.36■■□□□ 1.17
PCDHGB3-202ENST00000618934 LPIN2Q92539 896 aa22.36■■□□□ 1.17
PCDHGB3-202ENST00000618934 ZSWIM5Q9P217 1185 aa22.36■■□□□ 1.17
PCDHGB3-202ENST00000618934 MBD4O95243 580 aa22.36■■□□□ 1.17
PCDHGB3-202ENST00000618934 PKNOX2Q96KN3 472 aa22.36■■□□□ 1.17
PCDHGB3-202ENST00000618934 SLC39A14Q15043 492 aa22.35■■□□□ 1.17
PCDHGB3-202ENST00000618934 IFNL3Q8IZI9 196 aa22.35■■□□□ 1.17
PCDHGB3-202ENST00000618934 STK11IPQ8N1F8 1099 aa22.35■■□□□ 1.17
PCDHGB3-202ENST00000618934 ECM29Q5VYK3 1845 aa22.35■■□□□ 1.17
PCDHGB3-202ENST00000618934 CCDC69A6NI79 296 aa22.35■■□□□ 1.17
PCDHGB3-202ENST00000618934 SLC3A2P08195 630 aaKnown RBP22.35■■□□□ 1.17
PCDHGB3-202ENST00000618934 CMA1P23946 247 aa22.35■■□□□ 1.17
PCDHGB3-202ENST00000618934 CCZ1BP86790 482 aa22.35■■□□□ 1.17
PCDHGB3-202ENST00000618934 CCZ1P86791 482 aaPredicted RBP22.35■■□□□ 1.17
PCDHGB3-202ENST00000618934 TPD52L1Q16890 204 aaPredicted RBP22.35■■□□□ 1.17
PCDHGB3-202ENST00000618934 ERVV-1B6SEH8 477 aa22.34■■□□□ 1.17
PCDHGB3-202ENST00000618934 UQCRFS1P1P0C7P4 283 aa22.34■■□□□ 1.17
PCDHGB3-202ENST00000618934 TMEM67Q5HYA8 995 aa22.34■■□□□ 1.17
PCDHGB3-202ENST00000618934 NFXL1Q6ZNB6 911 aa22.34■■□□□ 1.17
PCDHGB3-202ENST00000618934 MTERF4Q7Z6M4 381 aaKnown RBP22.34■■□□□ 1.17
PCDHGB3-202ENST00000618934 CLIC6Q96NY7 704 aa22.34■■□□□ 1.17
PCDHGB3-202ENST00000618934 ZBTB43O43298 467 aa22.33■■□□□ 1.17
PCDHGB3-202ENST00000618934 SKILP12757 684 aa22.33■■□□□ 1.17
PCDHGB3-202ENST00000618934 IL6STP40189 918 aaPredicted RBP22.33■■□□□ 1.17
PCDHGB3-202ENST00000618934 PTPAQ15257 358 aa22.33■■□□□ 1.17
PCDHGB3-202ENST00000618934 PATL2C9JE40 543 aaKnown RBP22.33■■□□□ 1.17
PCDHGB3-202ENST00000618934 CTIFO43310 598 aaKnown RBP22.33■■□□□ 1.17
PCDHGB3-202ENST00000618934 SHC4Q6S5L8 630 aa22.33■■□□□ 1.17
PCDHGB3-202ENST00000618934 NAT10Q9H0A0 1025 aaKnown RBP22.33■■□□□ 1.17
PCDHGB3-202ENST00000618934 GSG1L2A8MUP6 293 aa22.32■■□□□ 1.16
PCDHGB3-202ENST00000618934 EXOC5O00471 708 aa22.32■■□□□ 1.16
PCDHGB3-202ENST00000618934 BCAMP50895 628 aa22.32■■□□□ 1.16
PCDHGB3-202ENST00000618934 RBM6P78332 1123 aaKnown RBP22.32■■□□□ 1.16
PCDHGB3-202ENST00000618934 MAP3K14Q99558 947 aa22.32■■□□□ 1.16
PCDHGB3-202ENST00000618934 ZKSCAN3Q9BRR0 538 aa22.32■■□□□ 1.16
PCDHGB3-202ENST00000618934 BCL11BQ9C0K0 894 aaPredicted RBP22.32■■□□□ 1.16
PCDHGB3-202ENST00000618934 NHSL1Q5SYE7 1610 aa22.32■■□□□ 1.16
PCDHGB3-202ENST00000618934 MROH5Q6ZUA9 1318 aa22.32■■□□□ 1.16
PCDHGB3-202ENST00000618934 GOLGA8AA7E2F4 631 aa22.32■■□□□ 1.16
PCDHGB3-202ENST00000618934 GUCY1A2P33402 732 aa22.32■■□□□ 1.16
PCDHGB3-202ENST00000618934 NAA30Q147X3 362 aaPredicted RBP22.32■■□□□ 1.16
PCDHGB3-202ENST00000618934 NCAPHQ15003 741 aa22.32■■□□□ 1.16
PCDHGB3-202ENST00000618934 ALX1Q15699 326 aa22.32■■□□□ 1.16
PCDHGB3-202ENST00000618934 TMEM87BQ96K49 555 aa22.32■■□□□ 1.16
PCDHGB3-202ENST00000618934 A0A0G2JS52 829 aa22.31■■□□□ 1.16
PCDHGB3-202ENST00000618934 INTS5Q6P9B9 1019 aaKnown RBP22.31■■□□□ 1.16
PCDHGB3-202ENST00000618934 XPO4Q9C0E2 1151 aaKnown RBP22.31■■□□□ 1.16
PCDHGB3-202ENST00000618934 NAPBQ9H115 298 aa22.31■■□□□ 1.16
PCDHGB3-202ENST00000618934 IARSP41252 1262 aaKnown RBP22.31■■□□□ 1.16
PCDHGB3-202ENST00000618934 NLRP12P59046 1061 aa22.31■■□□□ 1.16
PCDHGB3-202ENST00000618934 SGMS1Q86VZ5 419 aa22.31■■□□□ 1.16
PCDHGB3-202ENST00000618934 TRMT1Q9NXH9 659 aaKnown RBP22.31■■□□□ 1.16
PCDHGB3-202ENST00000618934 IFNKQ9P0W0 207 aa22.31■■□□□ 1.16
PCDHGB3-202ENST00000618934 IFIT3O14879 490 aaKnown RBP22.3■■□□□ 1.16
PCDHGB3-202ENST00000618934 EIF5P55010 431 aaKnown RBP22.3■■□□□ 1.16
PCDHGB3-202ENST00000618934 LCORLQ8N3X6 602 aa22.3■■□□□ 1.16
PCDHGB3-202ENST00000618934 SLC26A6Q9BXS9 759 aa22.3■■□□□ 1.16
PCDHGB3-202ENST00000618934 SMIM22K7EJ46 135 aa22.3■■□□□ 1.16
PCDHGB3-202ENST00000618934 SLC5A1P13866 664 aa22.3■■□□□ 1.16
PCDHGB3-202ENST00000618934 CMTR1Q8N1G2 835 aaKnown RBP22.3■■□□□ 1.16
PCDHGB3-202ENST00000618934 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.3■■□□□ 1.16
PCDHGB3-202ENST00000618934 CHD4Q14839 1912 aa22.3■■□□□ 1.16
PCDHGB3-202ENST00000618934 LRP5O75197 1615 aa22.3■■□□□ 1.16
PCDHGB3-202ENST00000618934 WTIPA6NIX2 430 aaPredicted RBP22.29■■□□□ 1.16
PCDHGB3-202ENST00000618934 SYKP43405 635 aa22.29■■□□□ 1.16
PCDHGB3-202ENST00000618934 RRP12Q5JTH9 1297 aaKnown RBP22.29■■□□□ 1.16
PCDHGB3-202ENST00000618934 ZNF592Q92610 1267 aa22.29■■□□□ 1.16
PCDHGB3-202ENST00000618934 HSD3B7Q9H2F3 369 aa22.29■■□□□ 1.16
PCDHGB3-202ENST00000618934 HPSEQ9Y251 543 aa22.29■■□□□ 1.16
PCDHGB3-202ENST00000618934 CDKL5O76039 1030 aa22.29■■□□□ 1.16
PCDHGB3-202ENST00000618934 U2AF2P26368 475 aaKnown RBP eCLIP22.29■■□□□ 1.16
PCDHGB3-202ENST00000618934 MAP3K12Q12852 859 aa22.29■■□□□ 1.16
PCDHGB3-202ENST00000618934 ZRSR1Q15695 479 aaKnown RBP22.29■■□□□ 1.16
PCDHGB3-202ENST00000618934 MIGA1Q8NAN2 632 aa22.29■■□□□ 1.16
PCDHGB3-202ENST00000618934 MPHOSPH8Q99549 860 aa22.29■■□□□ 1.16
PCDHGB3-202ENST00000618934 BPIFA3Q9BQP9 254 aa22.29■■□□□ 1.16
PCDHGB3-202ENST00000618934 CCDC94Q9BW85 323 aaPredicted RBP22.29■■□□□ 1.16
PCDHGB3-202ENST00000618934 IQSEC3Q9UPP2 1182 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms