RNA–Protein interactions for RNA: ENST00000618521.4

SH2B1-216, Transcript of SH2B adaptor protein 1, humanhuman

TSL 1 (best) BASIC

Gene SH2B1, Length 2,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B1-216ENST00000618521 L2HGDHQ9H9P8 463 aa20.21■□□□□ 0.83
SH2B1-216ENST00000618521 IFIT5Q13325 482 aaKnown RBP20.2■□□□□ 0.82
SH2B1-216ENST00000618521 ERCC4Q92889 916 aaPredicted RBP20.2■□□□□ 0.82
SH2B1-216ENST00000618521 EFCC1Q9HA90 598 aa20.2■□□□□ 0.82
SH2B1-216ENST00000618521 SH3TC1Q8TE82 1336 aa20.2■□□□□ 0.82
SH2B1-216ENST00000618521 GYS2P54840 703 aa20.2■□□□□ 0.82
SH2B1-216ENST00000618521 HELBQ8NG08 1087 aaPredicted RBP20.2■□□□□ 0.82
SH2B1-216ENST00000618521 RFX7Q2KHR2 1363 aa20.2■□□□□ 0.82
SH2B1-216ENST00000618521 LAMA4Q16363 1823 aa20.2■□□□□ 0.82
SH2B1-216ENST00000618521 SNAP23O00161 211 aa20.2■□□□□ 0.82
SH2B1-216ENST00000618521 SEC31AO94979 1220 aaKnown RBP20.2■□□□□ 0.82
SH2B1-216ENST00000618521 CAMTA2O94983 1202 aa20.2■□□□□ 0.82
SH2B1-216ENST00000618521 ZRANB2O95218 330 aaKnown RBP eCLIP20.2■□□□□ 0.821e-5■□□□□ 10.7
SH2B1-216ENST00000618521 ADORA1P30542 326 aa20.2■□□□□ 0.82
SH2B1-216ENST00000618521 TRIM28Q13263 835 aaKnown RBP20.2■□□□□ 0.82
SH2B1-216ENST00000618521 TMCO3Q6UWJ1 677 aa20.2■□□□□ 0.82
SH2B1-216ENST00000618521 TTLL11Q8NHH1 800 aa20.2■□□□□ 0.82
SH2B1-216ENST00000618521 MYO1CO00159 1063 aa20.19■□□□□ 0.82
SH2B1-216ENST00000618521 TPM4P67936 248 aa20.19■□□□□ 0.82
SH2B1-216ENST00000618521 MUM1L1Q5H9M0 696 aa20.19■□□□□ 0.82
SH2B1-216ENST00000618521 SARM1Q6SZW1 724 aa20.19■□□□□ 0.82
SH2B1-216ENST00000618521 FBXW7Q969H0 707 aa20.19■□□□□ 0.82
SH2B1-216ENST00000618521 LLPHQ9BRT6 129 aaKnown RBP20.19■□□□□ 0.82
SH2B1-216ENST00000618521 QTRT2Q9H974 415 aaKnown RBP20.19■□□□□ 0.82
SH2B1-216ENST00000618521 SRP68Q9UHB9 627 aaKnown RBP20.19■□□□□ 0.82
SH2B1-216ENST00000618521 SMARCC1Q92922 1105 aaPredicted RBP20.19■□□□□ 0.82
SH2B1-216ENST00000618521 RCOR1Q9UKL0 485 aa20.19■□□□□ 0.82
SH2B1-216ENST00000618521 A0A1B0GUL7 405 aa20.18■□□□□ 0.82
SH2B1-216ENST00000618521 E7EWF7 191 aa20.18■□□□□ 0.82
SH2B1-216ENST00000618521 HMGB1P09429 215 aaKnown RBP20.18■□□□□ 0.82
SH2B1-216ENST00000618521 HSP90AB3PQ58FF7 597 aa20.18■□□□□ 0.82
SH2B1-216ENST00000618521 TTLL5Q6EMB2 1281 aa20.18■□□□□ 0.82
SH2B1-216ENST00000618521 HSPD1P10809 573 aaKnown RBP20.18■□□□□ 0.82
SH2B1-216ENST00000618521 CTSWP56202 376 aa20.18■□□□□ 0.82
SH2B1-216ENST00000618521 EXOSC10Q01780 885 aaKnown RBP20.18■□□□□ 0.82
SH2B1-216ENST00000618521 ZSCAN26Q16670 478 aa20.18■□□□□ 0.82
SH2B1-216ENST00000618521 NAA16Q6N069 864 aaPredicted RBP20.18■□□□□ 0.82
SH2B1-216ENST00000618521 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.18■□□□□ 0.824e-7■■□□□ 12.2
SH2B1-216ENST00000618521 KIF2AO00139 706 aaPredicted RBP20.17■□□□□ 0.82
SH2B1-216ENST00000618521 NOP2P46087 812 aaKnown RBP20.17■□□□□ 0.82
SH2B1-216ENST00000618521 CCDC93Q567U6 631 aa20.17■□□□□ 0.82
SH2B1-216ENST00000618521 E4F1Q66K89 784 aaPredicted RBP20.17■□□□□ 0.82
SH2B1-216ENST00000618521 ZNF34Q8IZ26 560 aa20.17■□□□□ 0.82
SH2B1-216ENST00000618521 BECN2A8MW95 431 aa20.17■□□□□ 0.82
SH2B1-216ENST00000618521 DHX16O60231 1041 aaKnown RBP20.17■□□□□ 0.82
SH2B1-216ENST00000618521 IL15P40933 162 aaPredicted RBP20.17■□□□□ 0.82
SH2B1-216ENST00000618521 LDHAL6AQ6ZMR3 332 aa20.17■□□□□ 0.82
SH2B1-216ENST00000618521 SEC31BQ9NQW1 1179 aa20.17■□□□□ 0.82
SH2B1-216ENST00000618521 GPHNQ9NQX3 736 aaPredicted RBP20.17■□□□□ 0.82
SH2B1-216ENST00000618521 HELLSQ9NRZ9 838 aa20.17■□□□□ 0.82
SH2B1-216ENST00000618521 CCNL1Q9UK58 526 aaPredicted RBP20.17■□□□□ 0.82
SH2B1-216ENST00000618521 GNPATO15228 680 aa20.16■□□□□ 0.82
SH2B1-216ENST00000618521 ME1P48163 572 aa20.16■□□□□ 0.82
SH2B1-216ENST00000618521 ZMYM1Q5SVZ6 1142 aa20.16■□□□□ 0.82
SH2B1-216ENST00000618521 CCDC73Q6ZRK6 1079 aa20.16■□□□□ 0.82
SH2B1-216ENST00000618521 DSCC1Q9BVC3 393 aa20.16■□□□□ 0.82
SH2B1-216ENST00000618521 CNNM1Q9NRU3 951 aa20.16■□□□□ 0.82
SH2B1-216ENST00000618521 CEP126Q9P2H0 1117 aa20.16■□□□□ 0.82
SH2B1-216ENST00000618521 PPP1R13BQ96KQ4 1090 aa20.16■□□□□ 0.82
SH2B1-216ENST00000618521 MAST3O60307 1309 aa20.16■□□□□ 0.82
SH2B1-216ENST00000618521 ERVV-1B6SEH8 477 aa20.16■□□□□ 0.82
SH2B1-216ENST00000618521 PDIA3P30101 505 aaKnown RBP20.16■□□□□ 0.82
SH2B1-216ENST00000618521 ILDR1Q86SU0 546 aaPredicted RBP20.16■□□□□ 0.82
SH2B1-216ENST00000618521 UBXN4Q92575 508 aa20.16■□□□□ 0.82
SH2B1-216ENST00000618521 NUP98P52948 1817 aa20.15■□□□□ 0.82
SH2B1-216ENST00000618521 KINO60870 393 aaKnown RBP20.15■□□□□ 0.82
SH2B1-216ENST00000618521 IFIT1P09914 478 aaKnown RBP20.15■□□□□ 0.82
SH2B1-216ENST00000618521 STX1AQ16623 288 aa20.15■□□□□ 0.82
SH2B1-216ENST00000618521 PI16Q6UXB8 463 aa20.15■□□□□ 0.82
SH2B1-216ENST00000618521 FSIP1Q8NA03 581 aa20.15■□□□□ 0.82
SH2B1-216ENST00000618521 ARGLU1Q9NWB6 273 aaPredicted RBP20.15■□□□□ 0.82
SH2B1-216ENST00000618521 OAS2P29728 719 aaKnown RBP20.15■□□□□ 0.82
SH2B1-216ENST00000618521 METTL24Q5JXM2 366 aa20.15■□□□□ 0.82
SH2B1-216ENST00000618521 OTUD7BQ6GQQ9 843 aa20.15■□□□□ 0.82
SH2B1-216ENST00000618521 ORC3Q9UBD5 711 aaPredicted RBP20.15■□□□□ 0.82
SH2B1-216ENST00000618521 M0R2C6 588 aa20.14■□□□□ 0.81
SH2B1-216ENST00000618521 CSF1RP07333 972 aa20.14■□□□□ 0.81
SH2B1-216ENST00000618521 AGXT2Q9BYV1 514 aa20.14■□□□□ 0.81
SH2B1-216ENST00000618521 TRPC5Q9UL62 973 aaPredicted RBP20.14■□□□□ 0.81
SH2B1-216ENST00000618521 CAVIN2O95810 425 aa20.13■□□□□ 0.81
SH2B1-216ENST00000618521 HAND2P61296 217 aa20.13■□□□□ 0.81
SH2B1-216ENST00000618521 FKBP4Q02790 459 aaKnown RBP eCLIP20.13■□□□□ 0.81
SH2B1-216ENST00000618521 ENGASEQ8NFI3 743 aa20.13■□□□□ 0.81
SH2B1-216ENST00000618521 CCDC34Q96HJ3 373 aa20.13■□□□□ 0.81
SH2B1-216ENST00000618521 ZNF396Q96N95 335 aaPredicted RBP20.13■□□□□ 0.81
SH2B1-216ENST00000618521 UTP14AQ9BVJ6 771 aaKnown RBP20.13■□□□□ 0.81
SH2B1-216ENST00000618521 EPC1Q9H2F5 836 aa20.13■□□□□ 0.81
SH2B1-216ENST00000618521 CTAGE5O15320 804 aa20.13■□□□□ 0.81
SH2B1-216ENST00000618521 SALL1Q9NSC2 1324 aa20.13■□□□□ 0.81
SH2B1-216ENST00000618521 MYH15Q9Y2K3 1946 aa20.13■□□□□ 0.81
SH2B1-216ENST00000618521 ANKRD18BA2A2Z9 1011 aa20.13■□□□□ 0.81
SH2B1-216ENST00000618521 RNF113AO15541 343 aaKnown RBP20.13■□□□□ 0.81
SH2B1-216ENST00000618521 SASH3O75995 380 aa20.13■□□□□ 0.81
SH2B1-216ENST00000618521 CHRM1P11229 460 aaPredicted RBP20.13■□□□□ 0.81
SH2B1-216ENST00000618521 CASQ1P31415 396 aa20.13■□□□□ 0.81
SH2B1-216ENST00000618521 FAM160A1Q05DH4 1040 aa20.13■□□□□ 0.81
SH2B1-216ENST00000618521 GPS2Q13227 327 aa20.13■□□□□ 0.81
SH2B1-216ENST00000618521 RAB11FIP4Q86YS3 637 aa20.13■□□□□ 0.81
SH2B1-216ENST00000618521 KCND1Q9NSA2 647 aa20.13■□□□□ 0.81
SH2B1-216ENST00000618521 PDE8AO60658 829 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms