RNA–Protein interactions for RNA: ENST00000618007.4

TPTE-204, Transcript of transmembrane phosphatase with tensin homology, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TPTE, Length 2,150 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPTE-204ENST00000618007 IGSF3O75054 1194 aa13.21□□□□□ -0.29
TPTE-204ENST00000618007 METAP2P50579 478 aaKnown RBP eCLIP13.21□□□□□ -0.29
TPTE-204ENST00000618007 CTDSPL2Q05D32 466 aa13.21□□□□□ -0.29
TPTE-204ENST00000618007 SART3Q15020 963 aaKnown RBP13.21□□□□□ -0.29
TPTE-204ENST00000618007 TMEM67Q5HYA8 995 aa13.21□□□□□ -0.29
TPTE-204ENST00000618007 APOA5Q6Q788 366 aa13.21□□□□□ -0.29
TPTE-204ENST00000618007 PDLIM2Q96JY6 352 aa13.21□□□□□ -0.29
TPTE-204ENST00000618007 IFIT3O14879 490 aaKnown RBP13.21□□□□□ -0.3
TPTE-204ENST00000618007 KDM4AO75164 1064 aa13.21□□□□□ -0.3
TPTE-204ENST00000618007 NFIXQ14938 502 aa13.21□□□□□ -0.3
TPTE-204ENST00000618007 SLC27A3Q5K4L6 730 aa13.21□□□□□ -0.3
TPTE-204ENST00000618007 SYNE3Q6ZMZ3 975 aa13.21□□□□□ -0.3
TPTE-204ENST00000618007 NFXL1Q6ZNB6 911 aa13.21□□□□□ -0.3
TPTE-204ENST00000618007 LY9Q9HBG7 655 aa13.21□□□□□ -0.3
TPTE-204ENST00000618007 LRRC4BQ9NT99 713 aa13.21□□□□□ -0.3
TPTE-204ENST00000618007 DDX19AQ9NUU7 478 aaKnown RBP13.21□□□□□ -0.3
TPTE-204ENST00000618007 NEDD4P46934 1319 aa13.21□□□□□ -0.3
TPTE-204ENST00000618007 ZBTB43O43298 467 aa13.2□□□□□ -0.3
TPTE-204ENST00000618007 HS1BP3Q53T59 392 aa13.2□□□□□ -0.3
TPTE-204ENST00000618007 GIMAP6Q6P9H5 292 aa13.2□□□□□ -0.3
TPTE-204ENST00000618007 RNF214Q8ND24 703 aa13.2□□□□□ -0.3
TPTE-204ENST00000618007 RIOK1Q9BRS2 568 aaKnown RBP13.2□□□□□ -0.3
TPTE-204ENST00000618007 ANAPC4Q9UJX5 808 aa13.2□□□□□ -0.3
TPTE-204ENST00000618007 ERICH2A1L162 156 aa13.2□□□□□ -0.3
TPTE-204ENST00000618007 CCDC69A6NI79 296 aa13.2□□□□□ -0.3
TPTE-204ENST00000618007 LIG1P18858 919 aa13.2□□□□□ -0.3
TPTE-204ENST00000618007 BRAPQ7Z569 592 aa13.2□□□□□ -0.3
TPTE-204ENST00000618007 ADGRA1Q86SQ6 560 aa13.2□□□□□ -0.3
TPTE-204ENST00000618007 CCDC24Q8N4L8 307 aa13.2□□□□□ -0.3
TPTE-204ENST00000618007 CNBD1Q8NA66 436 aa13.2□□□□□ -0.3
TPTE-204ENST00000618007 PGBD1Q96JS3 809 aa13.2□□□□□ -0.3
TPTE-204ENST00000618007 NUP62CLQ9H1M0 184 aa13.2□□□□□ -0.3
TPTE-204ENST00000618007 INCENPQ9NQS7 918 aa13.2□□□□□ -0.3
TPTE-204ENST00000618007 LEMD3Q9Y2U8 911 aa13.2□□□□□ -0.3
TPTE-204ENST00000618007 SLC12A7Q9Y666 1083 aa13.2□□□□□ -0.3
TPTE-204ENST00000618007 COL4A1P02462 1669 aa13.19□□□□□ -0.3
TPTE-204ENST00000618007 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.19□□□□□ -0.3
TPTE-204ENST00000618007 PPFIA3O75145 1194 aa13.19□□□□□ -0.3
TPTE-204ENST00000618007 CCDC192P0DO97 292 aa13.19□□□□□ -0.3
TPTE-204ENST00000618007 FOSBP53539 338 aa13.19□□□□□ -0.3
TPTE-204ENST00000618007 GUCY1B3Q02153 619 aa13.19□□□□□ -0.3
TPTE-204ENST00000618007 PPARAQ07869 468 aa13.19□□□□□ -0.3
TPTE-204ENST00000618007 BICD2Q8TD16 824 aa13.19□□□□□ -0.3
TPTE-204ENST00000618007 FUCA2Q9BTY2 467 aa13.19□□□□□ -0.3
TPTE-204ENST00000618007 BRIP1Q9BX63 1249 aa13.19□□□□□ -0.3
TPTE-204ENST00000618007 DACT1Q9NYF0 836 aa13.19□□□□□ -0.3
TPTE-204ENST00000618007 LY75O60449 1722 aa13.19□□□□□ -0.3
TPTE-204ENST00000618007 ESPNB1AK53 854 aa13.18□□□□□ -0.3
TPTE-204ENST00000618007 PCP11498 1178 aaKnown RBP13.18□□□□□ -0.3
TPTE-204ENST00000618007 GRAPQ13588 217 aa13.18□□□□□ -0.3
TPTE-204ENST00000618007 MAP3K11Q16584 847 aa13.18□□□□□ -0.3
TPTE-204ENST00000618007 NKX2-3Q8TAU0 364 aa13.18□□□□□ -0.3
TPTE-204ENST00000618007 GRAPLQ8TC17 118 aaPredicted RBP13.18□□□□□ -0.3
TPTE-204ENST00000618007 NSUN4Q96CB9 384 aaKnown RBP13.18□□□□□ -0.3
TPTE-204ENST00000618007 TOMM22Q9NS69 142 aa13.18□□□□□ -0.3
TPTE-204ENST00000618007 IARSP41252 1262 aaKnown RBP13.18□□□□□ -0.3
TPTE-204ENST00000618007 SPTY2D1Q68D10 685 aaPredicted RBP13.18□□□□□ -0.3
TPTE-204ENST00000618007 USP28Q96RU2 1077 aa13.18□□□□□ -0.3
TPTE-204ENST00000618007 TNMDQ9H2S6 317 aa13.18□□□□□ -0.3
TPTE-204ENST00000618007 RTEL1Q9NZ71 1219 aa13.18□□□□□ -0.3
TPTE-204ENST00000618007 TFCP2L1Q9NZI6 479 aa13.18□□□□□ -0.3
TPTE-204ENST00000618007 ANKIB1Q9P2G1 1089 aa13.18□□□□□ -0.3
TPTE-204ENST00000618007 COL24A1Q17RW2 1714 aa13.18□□□□□ -0.3
TPTE-204ENST00000618007 MINDY4BA8MYZ0 360 aa13.17□□□□□ -0.3
TPTE-204ENST00000618007 RCAN1P53805 252 aa13.17□□□□□ -0.3
TPTE-204ENST00000618007 CEBPZQ03701 1054 aaKnown RBP13.17□□□□□ -0.3
TPTE-204ENST00000618007 WTAPQ15007 396 aa13.17□□□□□ -0.3
TPTE-204ENST00000618007 RRP12Q5JTH9 1297 aaKnown RBP13.17□□□□□ -0.3
TPTE-204ENST00000618007 MICU3Q86XE3 530 aa13.17□□□□□ -0.3
TPTE-204ENST00000618007 RAB11FIP4Q86YS3 637 aa13.17□□□□□ -0.3
TPTE-204ENST00000618007 SDR42E1Q8WUS8 393 aa13.17□□□□□ -0.3
TPTE-204ENST00000618007 ESR2Q92731 530 aa13.17□□□□□ -0.3
TPTE-204ENST00000618007 TACC3Q9Y6A5 838 aa13.17□□□□□ -0.3
TPTE-204ENST00000618007 C4BP0C0L5 1744 aa13.17□□□□□ -0.3
TPTE-204ENST00000618007 CCDC196A0A1B0GTZ2 297 aa13.17□□□□□ -0.3
TPTE-204ENST00000618007 GOLGA8AA7E2F4 631 aa13.17□□□□□ -0.3
TPTE-204ENST00000618007 CDC27P30260 824 aa13.17□□□□□ -0.3
TPTE-204ENST00000618007 MECOMQ03112 1051 aa13.17□□□□□ -0.3
TPTE-204ENST00000618007 PPP2R5BQ15173 497 aa13.17□□□□□ -0.3
TPTE-204ENST00000618007 NTRK3Q16288 839 aa13.17□□□□□ -0.3
TPTE-204ENST00000618007 ILDR1Q86SU0 546 aaPredicted RBP13.17□□□□□ -0.3
TPTE-204ENST00000618007 ALG1Q9BT22 464 aa13.17□□□□□ -0.3
TPTE-204ENST00000618007 SENP2Q9HC62 589 aa13.17□□□□□ -0.3
TPTE-204ENST00000618007 TAF1LQ8IZX4 1826 aa13.16□□□□□ -0.3
TPTE-204ENST00000618007 TAF1P21675 1872 aa13.16□□□□□ -0.3
TPTE-204ENST00000618007 NR1I2O75469 434 aa13.16□□□□□ -0.3
TPTE-204ENST00000618007 KLRK1P26718 216 aa13.16□□□□□ -0.3
TPTE-204ENST00000618007 PRR5LQ6MZQ0 368 aa13.16□□□□□ -0.3
TPTE-204ENST00000618007 RBM43Q6ZSC3 357 aaKnown RBP13.16□□□□□ -0.3
TPTE-204ENST00000618007 KRT27Q7Z3Y8 459 aa13.16□□□□□ -0.3
TPTE-204ENST00000618007 ZNF384Q8TF68 577 aa13.16□□□□□ -0.3
TPTE-204ENST00000618007 WASF1Q92558 559 aa13.16□□□□□ -0.3
TPTE-204ENST00000618007 UBAC1Q9BSL1 405 aa13.16□□□□□ -0.3
TPTE-204ENST00000618007 CLSTN2Q9H4D0 955 aa13.16□□□□□ -0.3
TPTE-204ENST00000618007 FAM217BQ9NTX9 383 aaPredicted RBP13.16□□□□□ -0.3
TPTE-204ENST00000618007 COL1A1P02452 1464 aaPredicted RBP13.16□□□□□ -0.3
TPTE-204ENST00000618007 SBF2Q86WG5 1849 aa13.16□□□□□ -0.3
TPTE-204ENST00000618007 GYS1P13807 737 aa13.15□□□□□ -0.3
TPTE-204ENST00000618007 IFNAR1P17181 557 aa13.15□□□□□ -0.3
TPTE-204ENST00000618007 DYNLL1P63167 89 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms