RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 DDX27Q96GQ7 796 aaKnown RBP8.33□□□□□ -1.08
PDE6A-205ENST00000617647 NUP88Q99567 741 aaPredicted RBP8.33□□□□□ -1.08
PDE6A-205ENST00000617647 RPAP1Q9BWH6 1393 aaPredicted RBP8.33□□□□□ -1.08
PDE6A-205ENST00000617647 PPFIA2O75334 1257 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 GNAT1P11488 350 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 DESP17661 470 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 CDC25CP30307 473 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 PAPOLAP51003 745 aaKnown RBP8.32□□□□□ -1.08
PDE6A-205ENST00000617647 HLTFQ14527 1009 aaKnown RBP eCLIP8.32□□□□□ -1.08
PDE6A-205ENST00000617647 SIRT2Q8IXJ6 389 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 SYCP3Q8IZU3 236 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 CCDC63Q8NA47 563 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 FBF1Q8TES7 1133 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 ARHGAP45Q92619 1136 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 NECTIN2Q92692 538 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 PNKPQ96T60 521 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 ESF1Q9H501 851 aaKnown RBP8.32□□□□□ -1.08
PDE6A-205ENST00000617647 POLD4Q9HCU8 107 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 PAPOLBQ9NRJ5 636 aaKnown RBP8.32□□□□□ -1.08
PDE6A-205ENST00000617647 FANCLQ9NW38 375 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 DACH1Q9UI36 760 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 L1RE1Q9UN81 338 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 DNA2P51530 1060 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 SLC8A3P57103 927 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 USP4Q13107 963 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 IQCB1Q15051 598 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 TAF11Q15544 211 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 RCSD1Q6JBY9 416 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 CEP85Q6P2H3 762 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 CYB5D1Q6P9G0 228 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 GSPT2Q8IYD1 628 aaKnown RBP8.32□□□□□ -1.08
PDE6A-205ENST00000617647 MEIS3Q99687 375 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 VCXQ9H320 206 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 NOP53Q9NZM5 478 aaKnown RBP8.32□□□□□ -1.08
PDE6A-205ENST00000617647 STK38LQ9Y2H1 464 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 ARHGAP31Q2M1Z3 1444 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 AKR1B15C9JRZ8 316 aaPredicted RBP8.32□□□□□ -1.08
PDE6A-205ENST00000617647 USP5P45974 858 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 SMTNP53814 917 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 ICA1Q05084 483 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 CCDC13Q8IYE1 715 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 SLC35F6Q8N357 371 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 EHD4Q9H223 541 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 ATP6V0A4Q9HBG4 840 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 USH1CQ9Y6N9 552 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 LRRIQ3A6PVS8 624 aaPredicted RBP8.32□□□□□ -1.08
PDE6A-205ENST00000617647 MAP2K7O14733 419 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 ATP11AP98196 1134 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 DPCR1Q3MIW9 517 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 ARHGAP22Q7Z5H3 698 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 HNRNPLLQ8WVV9 542 aaKnown RBP8.32□□□□□ -1.08
PDE6A-205ENST00000617647 IFT81Q8WYA0 676 aa8.32□□□□□ -1.08
PDE6A-205ENST00000617647 A1CFQ9NQ94 594 aaKnown RBP8.32□□□□□ -1.08
PDE6A-205ENST00000617647 EIF2AK4Q9P2K8 1649 aaKnown RBP8.31□□□□□ -1.08
PDE6A-205ENST00000617647 POLR3AO14802 1390 aaPredicted RBP8.31□□□□□ -1.08
PDE6A-205ENST00000617647 hCG_2014768A0A024R1R8 64 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 CA8P35219 290 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 PAFAH1B1P43034 410 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 ZNF365Q70YC5 407 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 TRIM42Q8IWZ5 723 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 IRX2Q9BZI1 471 aaPredicted RBP8.31□□□□□ -1.08
PDE6A-205ENST00000617647 TSGA10Q9BZW7 698 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 KDM4CQ9H3R0 1056 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 PICK1Q9NRD5 415 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 HOMER3Q9NSC5 361 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 AATFQ9NY61 560 aaKnown RBP eCLIP8.31□□□□□ -1.08
PDE6A-205ENST00000617647 NSD3Q9BZ95 1437 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 LARGE1O95461 756 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 DDR1Q08345 913 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 CCDC38Q502W7 563 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 NCAPH2Q6IBW4 605 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 TOGARAM2Q6ZUX3 1019 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 HOOK2Q96ED9 719 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 IQCGQ9H095 443 aaKnown RBP8.31□□□□□ -1.08
PDE6A-205ENST00000617647 PRDM16Q9HAZ2 1276 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 RGL1Q9NZL6 768 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 ABCC2Q92887 1545 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 MAST1Q9Y2H9 1570 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 CETN3O15182 167 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 DIAPH2O60879 1101 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 CCDC6Q16204 474 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 ABTB1Q969K4 478 aaPredicted RBP8.31□□□□□ -1.08
PDE6A-205ENST00000617647 FSD1Q9BTV5 496 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 CCDC113Q9H0I3 377 aa8.31□□□□□ -1.08
PDE6A-205ENST00000617647 DDX20Q9UHI6 824 aaKnown RBP8.31□□□□□ -1.08
PDE6A-205ENST00000617647 PRAG1Q86YV5 1406 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 POLR3DP05423 398 aaPredicted RBP8.3□□□□□ -1.08
PDE6A-205ENST00000617647 ME3Q16798 604 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 GIGYF2Q6Y7W6 1299 aaKnown RBP8.3□□□□□ -1.08
PDE6A-205ENST00000617647 RSRC2Q7L4I2 434 aaKnown RBP8.3□□□□□ -1.08
PDE6A-205ENST00000617647 SDCCAG8Q86SQ7 713 aaPredicted RBP8.3□□□□□ -1.08
PDE6A-205ENST00000617647 TSPYL6Q8N831 410 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 EZH1Q92800 747 aaPredicted RBP8.3□□□□□ -1.08
PDE6A-205ENST00000617647 OSBPL1AQ9BXW6 950 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 TRPC6Q9Y210 931 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 ERBB3P21860 1342 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 VWA3AA6NCI4 1184 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 STX10O60499 249 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 ATP1A3P13637 1013 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 VAV2P52735 878 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms