RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 M0R2C6 588 aa15.08■□□□□ 0
MSH6-214ENST00000616033 ARHGAP6O43182 974 aa15.08■□□□□ 0
MSH6-214ENST00000616033 ZMYND10O75800 440 aa15.08■□□□□ 0
MSH6-214ENST00000616033 USPL1Q5W0Q7 1092 aa15.08■□□□□ 0
MSH6-214ENST00000616033 PDE6BP35913 854 aa15.07■□□□□ 0
MSH6-214ENST00000616033 AFMP43652 599 aa15.07■□□□□ 0
MSH6-214ENST00000616033 VSTM4Q8IW00 320 aa15.07■□□□□ 0
MSH6-214ENST00000616033 INCENPQ9NQS7 918 aa15.07■□□□□ 0
MSH6-214ENST00000616033 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.07■□□□□ 0
MSH6-214ENST00000616033 ANKRD13DQ6ZTN6 518 aa15.07■□□□□ 0
MSH6-214ENST00000616033 CDC5LQ99459 802 aaKnown RBP15.07■□□□□ 0
MSH6-214ENST00000616033 ABCB6Q9NP58 842 aa15.07■□□□□ 0
MSH6-214ENST00000616033 UBR1Q8IWV7 1749 aa15.07■□□□□ 0
MSH6-214ENST00000616033 TPM1P09493 284 aa15.07■□□□□ 0
MSH6-214ENST00000616033 TSGA10IPQ3SY00 556 aa15.07■□□□□ 0
MSH6-214ENST00000616033 VPS37DQ86XT2 251 aa15.07■□□□□ 0
MSH6-214ENST00000616033 HSD3B7Q9H2F3 369 aa15.07■□□□□ 0
MSH6-214ENST00000616033 LRRC24Q50LG9 513 aa15.06■□□□□ 0
MSH6-214ENST00000616033 CCDC102BQ68D86 513 aa15.06■□□□□ 0
MSH6-214ENST00000616033 GPIHBP1Q8IV16 184 aa15.06■□□□□ 0
MSH6-214ENST00000616033 FOXP4Q8IVH2 680 aaPredicted RBP15.06■□□□□ 0
MSH6-214ENST00000616033 SMYD4Q8IYR2 804 aaPredicted RBP15.06■□□□□ 0
MSH6-214ENST00000616033 RAI14Q9P0K7 980 aa15.06■□□□□ 0
MSH6-214ENST00000616033 DHX8Q14562 1220 aaKnown RBP15.06■□□□□ 0
MSH6-214ENST00000616033 RRP12Q5JTH9 1297 aaKnown RBP15.06■□□□□ 0
MSH6-214ENST00000616033 SHC4Q6S5L8 630 aa15.06■□□□□ 0
MSH6-214ENST00000616033 PNKPQ96T60 521 aa15.06■□□□□ 0
MSH6-214ENST00000616033 TSPYL1Q9H0U9 437 aa15.06■□□□□ 0
MSH6-214ENST00000616033 MAST3O60307 1309 aa15.06■□□□□ 0
MSH6-214ENST00000616033 TEX33O43247 280 aa15.05■□□□□ 0
MSH6-214ENST00000616033 ABL1P00519 1130 aa15.05■□□□□ 0
MSH6-214ENST00000616033 GRIN1Q05586 938 aa15.05■□□□□ 0
MSH6-214ENST00000616033 CT47A1Q5JQC4 288 aaPredicted RBP15.05■□□□□ 0
MSH6-214ENST00000616033 OSBP2Q969R2 916 aa15.05■□□□□ 0
MSH6-214ENST00000616033 MPHOSPH8Q99549 860 aa15.05■□□□□ 0
MSH6-214ENST00000616033 INTS13Q9NVM9 706 aa15.05■□□□□ 0
MSH6-214ENST00000616033 MRFAP1Q9Y605 127 aa15.05■□□□□ 0
MSH6-214ENST00000616033 TECPR2O15040 1411 aa15.05■□□□□ 0
MSH6-214ENST00000616033 A0A1W2PQ27 194 aa15.05■□□□□ -0
MSH6-214ENST00000616033 A0A1W2PQ64 194 aa15.05■□□□□ -0
MSH6-214ENST00000616033 A0A1W2PQD8 194 aa15.05■□□□□ -0
MSH6-214ENST00000616033 POLR2DO15514 142 aaKnown RBP15.05■□□□□ -0
MSH6-214ENST00000616033 ACTN2P35609 894 aa15.05■□□□□ -0
MSH6-214ENST00000616033 MAP3K9P80192 1104 aa15.05■□□□□ -0
MSH6-214ENST00000616033 EXOSC10Q01780 885 aaKnown RBP15.05■□□□□ -0
MSH6-214ENST00000616033 FMR1Q06787 632 aaKnown RBP eCLIP15.05■□□□□ -09e-7■■■■□ 23.3
MSH6-214ENST00000616033 AXDND1Q5T1B0 1012 aaPredicted RBP15.05■□□□□ -0
MSH6-214ENST00000616033 HAUS7Q99871 368 aa15.05■□□□□ -0
MSH6-214ENST00000616033 DDX21Q9NR30 783 aaKnown RBP eCLIP15.05■□□□□ -0
MSH6-214ENST00000616033 USP31Q70CQ4 1352 aa15.05■□□□□ -0
MSH6-214ENST00000616033 TXLNAP40222 546 aa15.05■□□□□ -0
MSH6-214ENST00000616033 CCT6AP40227 531 aaKnown RBP15.05■□□□□ -0
MSH6-214ENST00000616033 IMMTQ16891 758 aaKnown RBP15.05■□□□□ -0
MSH6-214ENST00000616033 AKAP4Q5JQC9 854 aa15.05■□□□□ -0
MSH6-214ENST00000616033 SRLQ86TD4 932 aa15.05■□□□□ -0
MSH6-214ENST00000616033 ALDH8A1Q9H2A2 487 aaPredicted RBP15.05■□□□□ -0
MSH6-214ENST00000616033 KCNH3Q9ULD8 1083 aa15.05■□□□□ -0
MSH6-214ENST00000616033 CMA1P23946 247 aa15.04■□□□□ -0
MSH6-214ENST00000616033 KIF23Q02241 960 aaPredicted RBP15.04■□□□□ -0
MSH6-214ENST00000616033 TRIM29Q14134 588 aa15.04■□□□□ -0
MSH6-214ENST00000616033 PPFIBP1Q86W92 1011 aa15.04■□□□□ -0
MSH6-214ENST00000616033 GOLGA6L1Q8N7Z2 621 aa15.04■□□□□ -0
MSH6-214ENST00000616033 ACRBPQ8NEB7 543 aa15.04■□□□□ -0
MSH6-214ENST00000616033 RIN2Q8WYP3 895 aaPredicted RBP15.04■□□□□ -0
MSH6-214ENST00000616033 CAPZA3Q96KX2 299 aa15.04■□□□□ -0
MSH6-214ENST00000616033 PUS3Q9BZE2 481 aaKnown RBP15.04■□□□□ -0
MSH6-214ENST00000616033 SENP2Q9HC62 589 aa15.04■□□□□ -0
MSH6-214ENST00000616033 KIF5CO60282 957 aa15.04■□□□□ -0
MSH6-214ENST00000616033 ICE2Q659A1 982 aa15.04■□□□□ -0
MSH6-214ENST00000616033 KRT40Q6A162 431 aa15.04■□□□□ -0
MSH6-214ENST00000616033 METTL16Q86W50 562 aaKnown RBP15.04■□□□□ -0
MSH6-214ENST00000616033 KCNJ14Q9UNX9 436 aa15.04■□□□□ -0
MSH6-214ENST00000616033 FGAP02671 866 aa15.04■□□□□ -0
MSH6-214ENST00000616033 MRPS25P82663 173 aaKnown RBP15.04■□□□□ -0
MSH6-214ENST00000616033 TTC19Q6DKK2 380 aaPredicted RBP15.04■□□□□ -0
MSH6-214ENST00000616033 GOLGA5Q8TBA6 731 aa15.04■□□□□ -0
MSH6-214ENST00000616033 ENC1O14682 589 aa15.03■□□□□ -0
MSH6-214ENST00000616033 YEATS4O95619 227 aa15.03■□□□□ -0
MSH6-214ENST00000616033 TRDNQ13061 729 aa15.03■□□□□ -0
MSH6-214ENST00000616033 CHRNA2Q15822 529 aa15.03■□□□□ -0
MSH6-214ENST00000616033 SLC26A6Q9BXS9 759 aa15.03■□□□□ -0
MSH6-214ENST00000616033 ZBTB3Q9H5J0 574 aa15.03■□□□□ -0
MSH6-214ENST00000616033 SERTAD1Q9UHV2 236 aa15.03■□□□□ -0
MSH6-214ENST00000616033 ITSN1Q15811 1721 aa15.03■□□□□ -0
MSH6-214ENST00000616033 ECM2O94769 699 aaPredicted RBP15.03■□□□□ -0
MSH6-214ENST00000616033 CCDC175P0C221 793 aa15.03■□□□□ -0
MSH6-214ENST00000616033 SPECC1LQ69YQ0 1117 aa15.03■□□□□ -0
MSH6-214ENST00000616033 NCAPH2Q6IBW4 605 aa15.03■□□□□ -0
MSH6-214ENST00000616033 TC2NQ8N9U0 490 aa15.03■□□□□ -0
MSH6-214ENST00000616033 POLR3EQ9NVU0 708 aa15.03■□□□□ -0
MSH6-214ENST00000616033 TFR2Q9UP52 801 aa15.03■□□□□ -0
MSH6-214ENST00000616033 ADGRL3Q9HAR2 1447 aa15.03■□□□□ -0
MSH6-214ENST00000616033 BMP6P22004 513 aa15.02■□□□□ -0
MSH6-214ENST00000616033 CDC25AP30304 524 aa15.02■□□□□ -0
MSH6-214ENST00000616033 RABGGTAQ92696 567 aa15.02■□□□□ -0
MSH6-214ENST00000616033 ZNF274Q96GC6 653 aaPredicted RBP15.02■□□□□ -0
MSH6-214ENST00000616033 MYCBPQ99417 103 aaPredicted RBP15.02■□□□□ -0
MSH6-214ENST00000616033 ZKSCAN3Q9BRR0 538 aa15.02■□□□□ -0
MSH6-214ENST00000616033 POLD4Q9HCU8 107 aa15.02■□□□□ -0
MSH6-214ENST00000616033 NLRP2Q9NX02 1062 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms