RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 CCDC17Q96LX7 622 aa11.08□□□□□ -0.64
TNFRSF9-204ENST00000615230 RABGAP1Q9Y3P9 1069 aa11.08□□□□□ -0.64
TNFRSF9-204ENST00000615230 ZNF804BA4D1E1 1349 aa11.08□□□□□ -0.64
TNFRSF9-204ENST00000615230 CPSF1Q10570 1443 aaKnown RBP11.08□□□□□ -0.64
TNFRSF9-204ENST00000615230 PRPHP41219 470 aa11.08□□□□□ -0.64
TNFRSF9-204ENST00000615230 CCDC184Q52MB2 194 aa11.08□□□□□ -0.64
TNFRSF9-204ENST00000615230 CIAPIN1Q6FI81 312 aa11.08□□□□□ -0.64
TNFRSF9-204ENST00000615230 CCDC82Q8N4S0 544 aa11.08□□□□□ -0.64
TNFRSF9-204ENST00000615230 TRIM75PA6NK02 468 aa11.08□□□□□ -0.64
TNFRSF9-204ENST00000615230 BARGINQ6ZT62 677 aa11.08□□□□□ -0.64
TNFRSF9-204ENST00000615230 C2orf69Q8N8R5 385 aa11.08□□□□□ -0.64
TNFRSF9-204ENST00000615230 PLVAPQ9BX97 442 aa11.08□□□□□ -0.64
TNFRSF9-204ENST00000615230 MRPL11Q9Y3B7 192 aaKnown RBP11.08□□□□□ -0.64
TNFRSF9-204ENST00000615230 NR1I2O75469 434 aa11.08□□□□□ -0.64
TNFRSF9-204ENST00000615230 GTF2IP78347 998 aa11.08□□□□□ -0.64
TNFRSF9-204ENST00000615230 TICAM2Q86XR7 235 aa11.08□□□□□ -0.64
TNFRSF9-204ENST00000615230 TAOK3Q9H2K8 898 aa11.08□□□□□ -0.64
TNFRSF9-204ENST00000615230 PA2G4Q9UQ80 394 aaKnown RBP11.08□□□□□ -0.64
TNFRSF9-204ENST00000615230 ZSCAN12O43309 604 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 DEXIO95424 95 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 SLC4A8Q2Y0W8 1093 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 KRT25Q7Z3Z0 450 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 C1orf167Q5SNV9 1468 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 IGSF3O75054 1194 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 STX1AQ16623 288 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 Q6ZUG5 572 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 PRKAG2Q9UGJ0 569 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 MCM3P25205 808 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 GRAPQ13588 217 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 GRAPLQ8TC17 118 aaPredicted RBP11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 HAUS2Q9NVX0 235 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 SLC1A4P43007 532 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 PLCD1P51178 756 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 ADCY7P51828 1080 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 CCDC144CPQ8IYA2 1237 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 DHX36Q9H2U1 1008 aaKnown RBP11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 ABCA6Q8N139 1617 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 USP31Q70CQ4 1352 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 H0YCG3 227 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 SLC8A3P57103 927 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 TTLL5Q6EMB2 1281 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 ELMSAN1Q6PJG2 1045 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 HS2ST1Q7LGA3 356 aa11.07□□□□□ -0.64
TNFRSF9-204ENST00000615230 ERLIN1O75477 346 aa11.06□□□□□ -0.64
TNFRSF9-204ENST00000615230 IDEP14735 1019 aa11.06□□□□□ -0.64
TNFRSF9-204ENST00000615230 RPL13P26373 211 aaKnown RBP11.06□□□□□ -0.64
TNFRSF9-204ENST00000615230 STRN3Q13033 797 aa11.06□□□□□ -0.64
TNFRSF9-204ENST00000615230 CDC37L1Q7L3B6 337 aa11.06□□□□□ -0.64
TNFRSF9-204ENST00000615230 COA1Q9GZY4 146 aa11.06□□□□□ -0.64
TNFRSF9-204ENST00000615230 FER1L4A9Z1Z3 1794 aa11.06□□□□□ -0.64
TNFRSF9-204ENST00000615230 GADL1Q6ZQY3 521 aa11.06□□□□□ -0.64
TNFRSF9-204ENST00000615230 BRF1Q92994 677 aa11.06□□□□□ -0.64
TNFRSF9-204ENST00000615230 KDM2BQ8NHM5 1336 aa11.06□□□□□ -0.64
TNFRSF9-204ENST00000615230 PATL2C9JE40 543 aaKnown RBP11.06□□□□□ -0.64
TNFRSF9-204ENST00000615230 FSIP1Q8NA03 581 aa11.06□□□□□ -0.64
TNFRSF9-204ENST00000615230 SUCLG2Q96I99 432 aa11.06□□□□□ -0.64
TNFRSF9-204ENST00000615230 NBPF3Q9H094 633 aa11.06□□□□□ -0.64
TNFRSF9-204ENST00000615230 HOXD10P28358 340 aa11.06□□□□□ -0.64
TNFRSF9-204ENST00000615230 ALS2CR12Q96Q35 445 aa11.06□□□□□ -0.64
TNFRSF9-204ENST00000615230 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.06□□□□□ -0.64
TNFRSF9-204ENST00000615230 EZRP15311 586 aaKnown RBP11.06□□□□□ -0.64
TNFRSF9-204ENST00000615230 PTPDC1A2A3K4 754 aa11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 NEMFO60524 1076 aa11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 ODR4Q5SWX8 454 aa11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 OTUD6AQ7L8S5 288 aa11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 APOBEC3FQ8IUX4 373 aaKnown RBP11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 CCDC65Q8IXS2 484 aa11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 LLPHQ9BRT6 129 aaKnown RBP11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 CEP83Q9Y592 693 aa11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 PER1O15534 1290 aaPredicted RBP11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 GALNT17Q6IS24 598 aa11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 SLC16A10Q8TF71 515 aa11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 DSCC1Q9BVC3 393 aa11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 SYNCQ9H7C4 482 aa11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 AATFQ9NY61 560 aaKnown RBP eCLIP11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 STX10O60499 249 aa11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 ABCD1P33897 745 aa11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 CFAP100Q494V2 611 aa11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 KBTBD3Q8NAB2 608 aa11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 ARMT1Q9H993 441 aa11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 NARFQ9UHQ1 456 aa11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 CHRNDQ07001 517 aa11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 DTHD1Q6ZMT9 781 aa11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 RSPH3Q86UC2 560 aa11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 EHBP1Q8NDI1 1231 aa11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 HOMER2Q9NSB8 354 aa11.05□□□□□ -0.64
TNFRSF9-204ENST00000615230 RFX1P22670 979 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 NFKBIBQ15653 356 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 RRAGBQ5VZM2 374 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 TCHPQ9BT92 498 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 MED14O60244 1454 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 USP17L3A6NCW0 530 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 USP17L4A6NCW7 530 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 hCG_1984214I3L0E3 225 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 PSMA7O14818 248 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 ATP5JP18859 108 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 COPB2P35606 906 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 CREB3L3Q68CJ9 461 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 USP17L1Q7RTZ2 530 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 ZNF713Q8N859 430 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms