RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 C2CD4AQ8NCU7 369 aaPredicted RBP8.88□□□□□ -0.99
SCAMP1-205ENST00000614488 STK35Q8TDR2 534 aa8.88□□□□□ -0.99
SCAMP1-205ENST00000614488 SORBS3O60504 671 aa8.87□□□□□ -0.99
SCAMP1-205ENST00000614488 BMP3P12645 472 aa8.87□□□□□ -0.99
SCAMP1-205ENST00000614488 DRD2P14416 443 aa8.87□□□□□ -0.99
SCAMP1-205ENST00000614488 KIF4BQ2VIQ3 1234 aa8.87□□□□□ -0.99
SCAMP1-205ENST00000614488 ZNF326Q5BKZ1 582 aaKnown RBP8.87□□□□□ -0.99
SCAMP1-205ENST00000614488 AKAP4Q5JQC9 854 aa8.87□□□□□ -0.99
SCAMP1-205ENST00000614488 SCARA3Q6AZY7 606 aa8.87□□□□□ -0.99
SCAMP1-205ENST00000614488 SLC51AQ86UW1 340 aa8.87□□□□□ -0.99
SCAMP1-205ENST00000614488 GIPC2Q8TF65 315 aa8.87□□□□□ -0.99
SCAMP1-205ENST00000614488 CRELD1Q96HD1 420 aa8.87□□□□□ -0.99
SCAMP1-205ENST00000614488 STOML1Q9UBI4 398 aa8.87□□□□□ -0.99
SCAMP1-205ENST00000614488 GSC2O15499 205 aa8.86□□□□□ -0.99
SCAMP1-205ENST00000614488 ZNF862O60290 1169 aa8.86□□□□□ -0.99
SCAMP1-205ENST00000614488 PAGE1O75459 146 aa8.86□□□□□ -0.99
SCAMP1-205ENST00000614488 CELA3AP09093 270 aa8.86□□□□□ -0.99
SCAMP1-205ENST00000614488 BMP6P22004 513 aa8.86□□□□□ -0.99
SCAMP1-205ENST00000614488 ST13P50502 369 aaKnown RBP8.86□□□□□ -0.99
SCAMP1-205ENST00000614488 PRSS36Q5K4E3 855 aa8.86□□□□□ -0.99
SCAMP1-205ENST00000614488 CLEC10AQ8IUN9 316 aa8.86□□□□□ -0.99
SCAMP1-205ENST00000614488 KCNB2Q92953 911 aa8.86□□□□□ -0.99
SCAMP1-205ENST00000614488 FAM161BQ96MY7 647 aa8.86□□□□□ -0.99
SCAMP1-205ENST00000614488 ZC3H12CQ9C0D7 883 aaKnown RBP8.86□□□□□ -0.99
SCAMP1-205ENST00000614488 GSX1Q9H4S2 264 aaPredicted RBP8.86□□□□□ -0.99
SCAMP1-205ENST00000614488 MRS2Q9HD23 443 aa8.86□□□□□ -0.99
SCAMP1-205ENST00000614488 CACNA2D2Q9NY47 1150 aa8.86□□□□□ -0.99
SCAMP1-205ENST00000614488 SLFN14P0C7P3 912 aa8.85□□□□□ -0.99
SCAMP1-205ENST00000614488 LIG1P18858 919 aa8.85□□□□□ -0.99
SCAMP1-205ENST00000614488 FSTP19883 344 aa8.85□□□□□ -0.99
SCAMP1-205ENST00000614488 LRRC14Q15048 493 aa8.85□□□□□ -0.99
SCAMP1-205ENST00000614488 SGO2Q562F6 1265 aa8.85□□□□□ -0.99
SCAMP1-205ENST00000614488 PCNX4Q63HM2 1172 aa8.85□□□□□ -0.99
SCAMP1-205ENST00000614488 FAM83CQ9BQN1 747 aa8.85□□□□□ -0.99
SCAMP1-205ENST00000614488 YIPF2Q9BWQ6 316 aa8.85□□□□□ -0.99
SCAMP1-205ENST00000614488 BCL11AQ9H165 835 aa8.85□□□□□ -0.99
SCAMP1-205ENST00000614488 AP4E1Q9UPM8 1137 aa8.85□□□□□ -0.99
SCAMP1-205ENST00000614488 PCDHGC5Q9Y5F6 944 aa8.85□□□□□ -0.99
SCAMP1-205ENST00000614488 ACTL7BQ9Y614 415 aa8.85□□□□□ -0.99
SCAMP1-205ENST00000614488 TMPRSS2O15393 492 aa8.84□□□□□ -0.99
SCAMP1-205ENST00000614488 TRIM37O94972 964 aa8.84□□□□□ -0.99
SCAMP1-205ENST00000614488 CTSHP09668 335 aa8.84□□□□□ -0.99
SCAMP1-205ENST00000614488 MAP4P27816 1152 aaKnown RBP8.84□□□□□ -0.99
SCAMP1-205ENST00000614488 USP11P51784 963 aa8.84□□□□□ -0.99
SCAMP1-205ENST00000614488 CCDC85BQ15834 202 aaPredicted RBP8.84□□□□□ -0.99
SCAMP1-205ENST00000614488 MAP1SQ66K74 1059 aaPredicted RBP8.84□□□□□ -0.99
SCAMP1-205ENST00000614488 LLGL2Q6P1M3 1020 aa8.84□□□□□ -0.99
SCAMP1-205ENST00000614488 BEND4Q6ZU67 534 aa8.84□□□□□ -0.99
SCAMP1-205ENST00000614488 WDR89Q96FK6 387 aaPredicted RBP8.84□□□□□ -0.99
SCAMP1-205ENST00000614488 KCNF1Q9H3M0 494 aa8.84□□□□□ -0.99
SCAMP1-205ENST00000614488 C7orf69Q9H7B7 122 aa8.84□□□□□ -0.99
SCAMP1-205ENST00000614488 CBX8Q9HC52 389 aa8.84□□□□□ -0.99
SCAMP1-205ENST00000614488 VTI1BQ9UEU0 232 aa8.84□□□□□ -0.99
SCAMP1-205ENST00000614488 CYP8B1Q9UNU6 501 aa8.84□□□□□ -0.99
SCAMP1-205ENST00000614488 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.83□□□□□ -1
SCAMP1-205ENST00000614488 ID3Q02535 119 aa8.83□□□□□ -1
SCAMP1-205ENST00000614488 TAF1CQ15572 869 aaPredicted RBP8.83□□□□□ -1
SCAMP1-205ENST00000614488 MEI1Q5TIA1 1274 aa8.83□□□□□ -1
SCAMP1-205ENST00000614488 DYMQ7RTS9 669 aa8.83□□□□□ -1
SCAMP1-205ENST00000614488 EZH1Q92800 747 aaPredicted RBP8.83□□□□□ -1
SCAMP1-205ENST00000614488 CRIM1Q9NZV1 1036 aa8.83□□□□□ -1
SCAMP1-205ENST00000614488 PPP1R9AQ9ULJ8 1098 aa8.83□□□□□ -1
SCAMP1-205ENST00000614488 USP31Q70CQ4 1352 aa8.83□□□□□ -1
SCAMP1-205ENST00000614488 IGLV1-40P01703 118 aa8.82□□□□□ -1
SCAMP1-205ENST00000614488 RPS26P62854 115 aaKnown RBP8.82□□□□□ -1
SCAMP1-205ENST00000614488 CDPF1Q6NVV7 123 aa8.82□□□□□ -1
SCAMP1-205ENST00000614488 TRIM42Q8IWZ5 723 aa8.82□□□□□ -1
SCAMP1-205ENST00000614488 GPBAR1Q8TDU6 330 aa8.82□□□□□ -1
SCAMP1-205ENST00000614488 NOC4LQ9BVI4 516 aaKnown RBP8.82□□□□□ -1
SCAMP1-205ENST00000614488 ATXN3LQ9H3M9 355 aa8.82□□□□□ -1
SCAMP1-205ENST00000614488 HMX2A2RU54 273 aa8.81□□□□□ -1
SCAMP1-205ENST00000614488 RXRBP28702 533 aa8.81□□□□□ -1
SCAMP1-205ENST00000614488 ASPAP45381 313 aa8.81□□□□□ -1
SCAMP1-205ENST00000614488 RASIP1Q5U651 963 aa8.81□□□□□ -1
SCAMP1-205ENST00000614488 RNF43Q68DV7 783 aa8.81□□□□□ -1
SCAMP1-205ENST00000614488 TTBK2Q6IQ55 1244 aa8.81□□□□□ -1
SCAMP1-205ENST00000614488 GRIN3AQ8TCU5 1115 aa8.81□□□□□ -1
SCAMP1-205ENST00000614488 ACSS3Q9H6R3 686 aa8.81□□□□□ -1
SCAMP1-205ENST00000614488 FAM105AQ9NUU6 356 aa8.81□□□□□ -1
SCAMP1-205ENST00000614488 FAM95CA0A1B0GW59 222 aa8.8□□□□□ -1
SCAMP1-205ENST00000614488 RLBP1P12271 317 aa8.8□□□□□ -1
SCAMP1-205ENST00000614488 ZNF16P17020 682 aaPredicted RBP8.8□□□□□ -1
SCAMP1-205ENST00000614488 NFIAQ12857 509 aa8.8□□□□□ -1
SCAMP1-205ENST00000614488 MRPL58Q14197 206 aaKnown RBP8.8□□□□□ -1
SCAMP1-205ENST00000614488 FBLIM1Q8WUP2 373 aa8.8□□□□□ -1
SCAMP1-205ENST00000614488 ACSBG1Q96GR2 724 aa8.8□□□□□ -1
SCAMP1-205ENST00000614488 FANCD2OSQ96PS1 177 aa8.8□□□□□ -1
SCAMP1-205ENST00000614488 DBNDD2Q9BQY9 259 aa8.8□□□□□ -1
SCAMP1-205ENST00000614488 MAP7Q14244 749 aa8.79□□□□□ -1
SCAMP1-205ENST00000614488 ZC3H12AQ5D1E8 599 aaKnown RBP8.79□□□□□ -1
SCAMP1-205ENST00000614488 PAOXQ6QHF9 649 aa8.79□□□□□ -1
SCAMP1-205ENST00000614488 RAB6AP20340 208 aa8.78□□□□□ -1
SCAMP1-205ENST00000614488 LIG3P49916 1009 aa8.78□□□□□ -1
SCAMP1-205ENST00000614488 ERVK-24P63145 666 aa8.78□□□□□ -1
SCAMP1-205ENST00000614488 AGMOQ6ZNB7 445 aa8.78□□□□□ -1
SCAMP1-205ENST00000614488 SEMA6CQ9H3T2 930 aa8.78□□□□□ -1
SCAMP1-205ENST00000614488 PIDD1Q9HB75 910 aa8.78□□□□□ -1
SCAMP1-205ENST00000614488 RBM47A0AV96 593 aaKnown RBP8.77□□□□□ -1.01
SCAMP1-205ENST00000614488 MPRIPQ6WCQ1 1025 aa8.77□□□□□ -1.01
SCAMP1-205ENST00000614488 GAL3ST3Q96A11 431 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms