RNA–Protein interactions for RNA: ENST00000613667.1

LINC00649-216, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 827 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-216ENST00000613667 KCNA10Q16322 511 aa4.79□□□□□ -1.64
LINC00649-216ENST00000613667 HP1BP3Q5SSJ5 553 aaPredicted RBP4.79□□□□□ -1.64
LINC00649-216ENST00000613667 ATCAYQ86WG3 371 aa4.79□□□□□ -1.64
LINC00649-216ENST00000613667 ASAP3Q8TDY4 903 aa4.79□□□□□ -1.64
LINC00649-216ENST00000613667 PLAGL2Q9UPG8 496 aa4.79□□□□□ -1.64
LINC00649-216ENST00000613667 AP4E1Q9UPM8 1137 aa4.79□□□□□ -1.64
LINC00649-216ENST00000613667 TMEM265A0A087WTH1 108 aa4.78□□□□□ -1.64
LINC00649-216ENST00000613667 METTL12A8MUP2 240 aa4.78□□□□□ -1.64
LINC00649-216ENST00000613667 TMEM253P0C7T8 217 aa4.78□□□□□ -1.64
LINC00649-216ENST00000613667 UBTFP17480 764 aaKnown RBP4.78□□□□□ -1.64
LINC00649-216ENST00000613667 MPZL3Q6UWV2 235 aa4.78□□□□□ -1.64
LINC00649-216ENST00000613667 BCANQ96GW7 911 aa4.78□□□□□ -1.64
LINC00649-216ENST00000613667 GGNBP2Q9H3C7 697 aa4.78□□□□□ -1.64
LINC00649-216ENST00000613667 CD320Q9NPF0 282 aa4.78□□□□□ -1.64
LINC00649-216ENST00000613667 STIM2Q9P246 746 aa4.78□□□□□ -1.64
LINC00649-216ENST00000613667 FOXD2O60548 495 aaPredicted RBP4.77□□□□□ -1.65
LINC00649-216ENST00000613667 FAM69CQ0P6D2 419 aa4.77□□□□□ -1.65
LINC00649-216ENST00000613667 XKR5Q6UX68 686 aa4.77□□□□□ -1.65
LINC00649-216ENST00000613667 BHLHE41Q9C0J9 482 aaPredicted RBP4.77□□□□□ -1.65
LINC00649-216ENST00000613667 CTNND2Q9UQB3 1225 aa4.77□□□□□ -1.65
LINC00649-216ENST00000613667 EREGO14944 169 aa4.76□□□□□ -1.65
LINC00649-216ENST00000613667 OXCT1P55809 520 aa4.76□□□□□ -1.65
LINC00649-216ENST00000613667 ZNF423Q2M1K9 1284 aa4.76□□□□□ -1.65
LINC00649-216ENST00000613667 CDCA8Q53HL2 280 aa4.76□□□□□ -1.65
LINC00649-216ENST00000613667 PEAR1Q5VY43 1037 aaPredicted RBP4.76□□□□□ -1.65
LINC00649-216ENST00000613667 BORCS6Q96GS4 357 aa4.76□□□□□ -1.65
LINC00649-216ENST00000613667 KCNK12Q9HB15 430 aa4.76□□□□□ -1.65
LINC00649-216ENST00000613667 ZFYVE1Q9HBF4 777 aa4.76□□□□□ -1.65
LINC00649-216ENST00000613667 PARD6AQ9NPB6 346 aa4.76□□□□□ -1.65
LINC00649-216ENST00000613667 LATS2Q9NRM7 1088 aa4.76□□□□□ -1.65
LINC00649-216ENST00000613667 PPP1R9AQ9ULJ8 1098 aa4.76□□□□□ -1.65
LINC00649-216ENST00000613667 LEFTY1O75610 366 aa4.75□□□□□ -1.65
LINC00649-216ENST00000613667 CEACAM5P06731 702 aa4.75□□□□□ -1.65
LINC00649-216ENST00000613667 MED14OSP0DP75 135 aa4.75□□□□□ -1.65
LINC00649-216ENST00000613667 SYN1P17600 705 aa4.75□□□□□ -1.65
LINC00649-216ENST00000613667 KRTAP10-2P60368 255 aa4.75□□□□□ -1.65
LINC00649-216ENST00000613667 POU4F3Q15319 338 aa4.75□□□□□ -1.65
LINC00649-216ENST00000613667 FNBP4Q8N3X1 1017 aaPredicted RBP4.75□□□□□ -1.65
LINC00649-216ENST00000613667 TRIM56Q9BRZ2 755 aaKnown RBP4.75□□□□□ -1.65
LINC00649-216ENST00000613667 RAD18Q9NS91 495 aa4.75□□□□□ -1.65
LINC00649-216ENST00000613667 NOVA2Q9UNW9 492 aaKnown RBP4.75□□□□□ -1.65
LINC00649-216ENST00000613667 ACIN1Q9UKV3 1341 aaKnown RBP4.74□□□□□ -1.65
LINC00649-216ENST00000613667 TCAF2A6NFQ2 919 aa4.74□□□□□ -1.65
LINC00649-216ENST00000613667 SWI5Q1ZZU3 235 aa4.74□□□□□ -1.65
LINC00649-216ENST00000613667 TMEM67Q5HYA8 995 aa4.74□□□□□ -1.65
LINC00649-216ENST00000613667 ARHGAP27Q6ZUM4 889 aa4.74□□□□□ -1.65
LINC00649-216ENST00000613667 EDEM1Q92611 657 aa4.74□□□□□ -1.65
LINC00649-216ENST00000613667 PMEPA1Q969W9 287 aa4.74□□□□□ -1.65
LINC00649-216ENST00000613667 KIRREL1Q96J84 757 aa4.74□□□□□ -1.65
LINC00649-216ENST00000613667 WDR18Q9BV38 432 aa4.74□□□□□ -1.65
LINC00649-216ENST00000613667 CXXC1Q9P0U4 656 aaPredicted RBP4.74□□□□□ -1.65
LINC00649-216ENST00000613667 SNX11Q9Y5W9 270 aa4.74□□□□□ -1.65
LINC00649-216ENST00000613667 PITPNM2Q9BZ72 1349 aa4.73□□□□□ -1.65
LINC00649-216ENST00000613667 NUAK1O60285 661 aa4.73□□□□□ -1.65
LINC00649-216ENST00000613667 SLC24A1O60721 1099 aa4.73□□□□□ -1.65
LINC00649-216ENST00000613667 AOC2O75106 756 aa4.73□□□□□ -1.65
LINC00649-216ENST00000613667 CFAP70Q5T0N1 1121 aa4.73□□□□□ -1.65
LINC00649-216ENST00000613667 ATG14Q6ZNE5 492 aa4.73□□□□□ -1.65
LINC00649-216ENST00000613667 ABTB2Q8N961 1025 aa4.73□□□□□ -1.65
LINC00649-216ENST00000613667 TNKS2Q9H2K2 1166 aa4.73□□□□□ -1.65
LINC00649-216ENST00000613667 TMPRSS5Q9H3S3 457 aa4.73□□□□□ -1.65
LINC00649-216ENST00000613667 ZMIZ1Q9ULJ6 1067 aa4.73□□□□□ -1.65
LINC00649-216ENST00000613667 CYP11A1P05108 521 aa4.72□□□□□ -1.65
LINC00649-216ENST00000613667 RPLP1P05386 114 aaKnown RBP4.72□□□□□ -1.65
LINC00649-216ENST00000613667 GLDCP23378 1020 aa4.72□□□□□ -1.65
LINC00649-216ENST00000613667 DNM1Q05193 864 aaKnown RBP4.72□□□□□ -1.65
LINC00649-216ENST00000613667 ZP2Q05996 745 aa4.72□□□□□ -1.65
LINC00649-216ENST00000613667 PCDH1Q08174 1060 aa4.72□□□□□ -1.65
LINC00649-216ENST00000613667 GGNQ86UU5 652 aa4.72□□□□□ -1.65
LINC00649-216ENST00000613667 ASB11Q8WXH4 323 aa4.72□□□□□ -1.65
LINC00649-216ENST00000613667 NSUN3Q9H649 340 aaKnown RBP4.72□□□□□ -1.65
LINC00649-216ENST00000613667 SYNGAP1Q96PV0 1343 aa4.72□□□□□ -1.65
LINC00649-216ENST00000613667 A0A0G2JLL6 359 aaPredicted RBP4.71□□□□□ -1.66
LINC00649-216ENST00000613667 TMPRSS2O15393 492 aa4.71□□□□□ -1.66
LINC00649-216ENST00000613667 PDGFAP04085 211 aa4.71□□□□□ -1.66
LINC00649-216ENST00000613667 ITIH2P19823 946 aa4.71□□□□□ -1.66
LINC00649-216ENST00000613667 C8orf34Q49A92 452 aa4.71□□□□□ -1.66
LINC00649-216ENST00000613667 CLUAP1Q96AJ1 413 aa4.71□□□□□ -1.66
LINC00649-216ENST00000613667 CALR3Q96L12 384 aaKnown RBP4.71□□□□□ -1.66
LINC00649-216ENST00000613667 DIRC2Q96SL1 478 aa4.71□□□□□ -1.66
LINC00649-216ENST00000613667 DUSP23Q9BVJ7 150 aa4.71□□□□□ -1.66
LINC00649-216ENST00000613667 ZCCHC4Q9H5U6 513 aa4.71□□□□□ -1.66
LINC00649-216ENST00000613667 SMG5Q9UPR3 1016 aaKnown RBP4.71□□□□□ -1.66
LINC00649-216ENST00000613667 EDN3P14138 238 aa4.7□□□□□ -1.66
LINC00649-216ENST00000613667 RFX1P22670 979 aa4.7□□□□□ -1.66
LINC00649-216ENST00000613667 LINC00310P59036 64 aa4.7□□□□□ -1.66
LINC00649-216ENST00000613667 IKZF1Q13422 519 aa4.7□□□□□ -1.66
LINC00649-216ENST00000613667 NFIXQ14938 502 aa4.7□□□□□ -1.66
LINC00649-216ENST00000613667 SPRED3Q2MJR0 410 aa4.7□□□□□ -1.66
LINC00649-216ENST00000613667 CYFIP1Q7L576 1253 aa4.7□□□□□ -1.66
LINC00649-216ENST00000613667 STK32AQ8WU08 396 aa4.7□□□□□ -1.66
LINC00649-216ENST00000613667 WDR89Q96FK6 387 aaPredicted RBP4.7□□□□□ -1.66
LINC00649-216ENST00000613667 HEXIM2Q96MH2 286 aaKnown RBP4.7□□□□□ -1.66
LINC00649-216ENST00000613667 CLEC4MQ9H2X3 399 aaPredicted RBP4.7□□□□□ -1.66
LINC00649-216ENST00000613667 C19orf73Q9NVV2 129 aa4.7□□□□□ -1.66
LINC00649-216ENST00000613667 FOXD3Q9UJU5 478 aaPredicted RBP4.7□□□□□ -1.66
LINC00649-216ENST00000613667 A0A096LPE4 126 aa4.69□□□□□ -1.66
LINC00649-216ENST00000613667 A0A1W2PPZ6 126 aa4.69□□□□□ -1.66
LINC00649-216ENST00000613667 TNFRSF21O75509 655 aa4.69□□□□□ -1.66
LINC00649-216ENST00000613667 GRIA4P48058 902 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms