RNA–Protein interactions for RNA: ENST00000612624.4

SMIM11B-201, Transcript of small integral membrane protein 11B, humanhuman

TSL 1 (best) BASIC

Gene SMIM11B, Length 1,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-201ENST00000612624 RPS12P25398 132 aaKnown RBP9.94□□□□□ -0.82
SMIM11B-201ENST00000612624 CTSWP56202 376 aa9.94□□□□□ -0.82
SMIM11B-201ENST00000612624 DLK2Q6UY11 383 aa9.94□□□□□ -0.82
SMIM11B-201ENST00000612624 TTLL11Q8NHH1 800 aa9.94□□□□□ -0.82
SMIM11B-201ENST00000612624 CELF1Q92879 486 aaKnown RBP9.94□□□□□ -0.82
SMIM11B-201ENST00000612624 ZNF333Q96JL9 665 aa9.94□□□□□ -0.82
SMIM11B-201ENST00000612624 PLA2G12BQ9BX93 195 aa9.94□□□□□ -0.82
SMIM11B-201ENST00000612624 BICC1Q9H694 974 aaKnown RBP9.94□□□□□ -0.82
SMIM11B-201ENST00000612624 TRIM17Q9Y577 477 aa9.94□□□□□ -0.82
SMIM11B-201ENST00000612624 TTC28Q96AY4 2481 aa9.94□□□□□ -0.82
SMIM11B-201ENST00000612624 VCANP13611 3396 aa9.94□□□□□ -0.82
SMIM11B-201ENST00000612624 UNC80Q8N2C7 3258 aa9.94□□□□□ -0.82
SMIM11B-201ENST00000612624 CENPFP49454 3210 aa9.93□□□□□ -0.82
SMIM11B-201ENST00000612624 ADM5C9JUS6 153 aa9.93□□□□□ -0.82
SMIM11B-201ENST00000612624 ZBTB7BO15156 539 aaPredicted RBP9.93□□□□□ -0.82
SMIM11B-201ENST00000612624 CSF1RP07333 972 aa9.93□□□□□ -0.82
SMIM11B-201ENST00000612624 IRX6P78412 446 aaPredicted RBP9.93□□□□□ -0.82
SMIM11B-201ENST00000612624 SF3B3Q15393 1217 aaKnown RBP9.93□□□□□ -0.82
SMIM11B-201ENST00000612624 ITPRIPQ8IWB1 547 aa9.93□□□□□ -0.82
SMIM11B-201ENST00000612624 SULF1Q8IWU6 871 aa9.93□□□□□ -0.82
SMIM11B-201ENST00000612624 NLRP3Q96P20 1036 aa9.93□□□□□ -0.82
SMIM11B-201ENST00000612624 GREM2Q9H772 168 aa9.93□□□□□ -0.82
SMIM11B-201ENST00000612624 C9orf78Q9NZ63 289 aaPredicted RBP9.93□□□□□ -0.82
SMIM11B-201ENST00000612624 LRRFIP2Q9Y608 721 aaKnown RBP9.93□□□□□ -0.82
SMIM11B-201ENST00000612624 ARAP2Q8WZ64 1704 aa9.93□□□□□ -0.82
SMIM11B-201ENST00000612624 SPTBN5Q9NRC6 3674 aaKnown RBP9.92□□□□□ -0.82
SMIM11B-201ENST00000612624 SCN9AQ15858 1988 aa9.92□□□□□ -0.82
SMIM11B-201ENST00000612624 MYH13Q9UKX3 1938 aa9.92□□□□□ -0.82
SMIM11B-201ENST00000612624 PSME4Q14997 1843 aa9.92□□□□□ -0.82
SMIM11B-201ENST00000612624 PPEF1O14829 653 aaPredicted RBP9.92□□□□□ -0.82
SMIM11B-201ENST00000612624 MVPQ14764 893 aaKnown RBP9.92□□□□□ -0.82
SMIM11B-201ENST00000612624 LMBR1LQ6UX01 489 aa9.92□□□□□ -0.82
SMIM11B-201ENST00000612624 FTSJ3Q8IY81 847 aaKnown RBP9.92□□□□□ -0.82
SMIM11B-201ENST00000612624 KLHDC4Q8TBB5 520 aa9.92□□□□□ -0.82
SMIM11B-201ENST00000612624 CDCA5Q96FF9 252 aa9.92□□□□□ -0.82
SMIM11B-201ENST00000612624 ZNF594Q96JF6 807 aaPredicted RBP9.92□□□□□ -0.82
SMIM11B-201ENST00000612624 CRBNQ96SW2 442 aa9.92□□□□□ -0.82
SMIM11B-201ENST00000612624 ATP6V0A2Q9Y487 856 aa9.92□□□□□ -0.82
SMIM11B-201ENST00000612624 PAPPA2Q9BXP8 1791 aa9.91□□□□□ -0.82
SMIM11B-201ENST00000612624 WTIPA6NIX2 430 aaPredicted RBP9.91□□□□□ -0.82
SMIM11B-201ENST00000612624 RFX5P48382 616 aaPredicted RBP9.91□□□□□ -0.82
SMIM11B-201ENST00000612624 RABL6Q3YEC7 729 aaPredicted RBP9.91□□□□□ -0.82
SMIM11B-201ENST00000612624 RPGRQ92834 1020 aaKnown RBP9.91□□□□□ -0.82
SMIM11B-201ENST00000612624 ERO1AQ96HE7 468 aa9.91□□□□□ -0.82
SMIM11B-201ENST00000612624 RBM17Q96I25 401 aaKnown RBP9.91□□□□□ -0.82
SMIM11B-201ENST00000612624 ZMYND15Q9H091 742 aa9.91□□□□□ -0.82
SMIM11B-201ENST00000612624 TMX4Q9H1E5 349 aaPredicted RBP9.91□□□□□ -0.82
SMIM11B-201ENST00000612624 ZNF609O15014 1411 aa9.9□□□□□ -0.82
SMIM11B-201ENST00000612624 RTL9Q8NET4 1388 aa9.9□□□□□ -0.82
SMIM11B-201ENST00000612624 PNMA6EA0A0J9YXQ4 647 aa9.9□□□□□ -0.82
SMIM11B-201ENST00000612624 SHTN1A0MZ66 631 aa9.9□□□□□ -0.82
SMIM11B-201ENST00000612624 RAD17O75943 681 aa9.9□□□□□ -0.82
SMIM11B-201ENST00000612624 UBTFL1P0CB47 393 aaPredicted RBP9.9□□□□□ -0.82
SMIM11B-201ENST00000612624 INHBEP58166 350 aa9.9□□□□□ -0.82
SMIM11B-201ENST00000612624 PDE3AQ14432 1141 aa9.9□□□□□ -0.82
SMIM11B-201ENST00000612624 SKIV2LQ15477 1246 aaKnown RBP9.9□□□□□ -0.82
SMIM11B-201ENST00000612624 SAMD7Q7Z3H4 446 aa9.9□□□□□ -0.82
SMIM11B-201ENST00000612624 PUS3Q9BZE2 481 aaKnown RBP9.9□□□□□ -0.82
SMIM11B-201ENST00000612624 R3HDMLQ9H3Y0 253 aa9.9□□□□□ -0.82
SMIM11B-201ENST00000612624 MYO5AQ9Y4I1 1855 aaKnown RBP9.89□□□□□ -0.83
SMIM11B-201ENST00000612624 RCCD1A6NED2 376 aa9.89□□□□□ -0.83
SMIM11B-201ENST00000612624 YDJCA8MPS7 323 aa9.89□□□□□ -0.83
SMIM11B-201ENST00000612624 SOX1O00570 391 aaPredicted RBP9.89□□□□□ -0.83
SMIM11B-201ENST00000612624 EGFRP00533 1210 aa9.89□□□□□ -0.83
SMIM11B-201ENST00000612624 ITGA6P23229 1130 aa9.89□□□□□ -0.83
SMIM11B-201ENST00000612624 GRAPQ13588 217 aa9.89□□□□□ -0.83
SMIM11B-201ENST00000612624 NBPF11Q86T75 865 aa9.89□□□□□ -0.83
SMIM11B-201ENST00000612624 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.89□□□□□ -0.83
SMIM11B-201ENST00000612624 EXOC6Q8TAG9 804 aa9.89□□□□□ -0.83
SMIM11B-201ENST00000612624 GRAPLQ8TC17 118 aaPredicted RBP9.89□□□□□ -0.83
SMIM11B-201ENST00000612624 ZBTB40Q9NUA8 1239 aa9.89□□□□□ -0.83
SMIM11B-201ENST00000612624 GGA3Q9NZ52 723 aa9.89□□□□□ -0.83
SMIM11B-201ENST00000612624 PA2G4Q9UQ80 394 aaKnown RBP9.89□□□□□ -0.83
SMIM11B-201ENST00000612624 CHMP3Q9Y3E7 222 aa9.89□□□□□ -0.83
SMIM11B-201ENST00000612624 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.89□□□□□ -0.83
SMIM11B-201ENST00000612624 TRIM6-TRIM34B2RNG4 842 aa9.88□□□□□ -0.83
SMIM11B-201ENST00000612624 C3orf80F5H4A9 247 aa9.88□□□□□ -0.83
SMIM11B-201ENST00000612624 CCDC152Q4G0S7 254 aa9.88□□□□□ -0.83
SMIM11B-201ENST00000612624 TBC1D10BQ4KMP7 808 aaPredicted RBP9.88□□□□□ -0.83
SMIM11B-201ENST00000612624 NUDT18Q6ZVK8 323 aa9.88□□□□□ -0.83
SMIM11B-201ENST00000612624 DDX46Q7L014 1031 aaKnown RBP9.88□□□□□ -0.83
SMIM11B-201ENST00000612624 SIRT2Q8IXJ6 389 aa9.88□□□□□ -0.83
SMIM11B-201ENST00000612624 SNAP23O00161 211 aa9.87□□□□□ -0.83
SMIM11B-201ENST00000612624 GNAI3P08754 354 aa9.87□□□□□ -0.83
SMIM11B-201ENST00000612624 PTPN12Q05209 780 aaKnown RBP9.87□□□□□ -0.83
SMIM11B-201ENST00000612624 KIF4BQ2VIQ3 1234 aa9.87□□□□□ -0.83
SMIM11B-201ENST00000612624 LRRC24Q50LG9 513 aa9.87□□□□□ -0.83
SMIM11B-201ENST00000612624 MYSM1Q5VVJ2 828 aa9.87□□□□□ -0.83
SMIM11B-201ENST00000612624 CEP85Q6P2H3 762 aa9.87□□□□□ -0.83
SMIM11B-201ENST00000612624 DPP8Q6V1X1 898 aaPredicted RBP9.87□□□□□ -0.83
SMIM11B-201ENST00000612624 UBE2Q1Q7Z7E8 422 aa9.87□□□□□ -0.83
SMIM11B-201ENST00000612624 SP8Q8IXZ3 490 aa9.87□□□□□ -0.83
SMIM11B-201ENST00000612624 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.87□□□□□ -0.83
SMIM11B-201ENST00000612624 EFCC1Q9HA90 598 aa9.87□□□□□ -0.83
SMIM11B-201ENST00000612624 DDX19BQ9UMR2 479 aa9.87□□□□□ -0.83
SMIM11B-201ENST00000612624 PSMD14O00487 310 aa9.86□□□□□ -0.83
SMIM11B-201ENST00000612624 BBOX1O75936 387 aa9.86□□□□□ -0.83
SMIM11B-201ENST00000612624 GNAI2P04899 355 aa9.86□□□□□ -0.83
SMIM11B-201ENST00000612624 HMGB1P09429 215 aaKnown RBP9.86□□□□□ -0.83
SMIM11B-201ENST00000612624 RPS8P62241 208 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms