RNA–Protein interactions for RNA: ENST00000612229.4

PTPRT-209, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5 BASIC

Gene PTPRT, Length 11,285 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-209ENST00000612229 RTN1Q16799 776 aa7.79□□□□□ -1.16
PTPRT-209ENST00000612229 CCDC184Q52MB2 194 aa7.79□□□□□ -1.16
PTPRT-209ENST00000612229 CRACR2BQ8N4Y2 399 aaPredicted RBP7.79□□□□□ -1.16
PTPRT-209ENST00000612229 PUF60Q9UHX1 559 aaKnown RBP7.79□□□□□ -1.16
PTPRT-209ENST00000612229 ZNF445P59923 1031 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 ZNF354CQ86Y25 554 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 DNM1Q05193 864 aaKnown RBP7.78□□□□□ -1.16
PTPRT-209ENST00000612229 ESCO1Q5FWF5 840 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 CCDC122Q5T0U0 273 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 BIVM-ERCC5R4GMW8 1640 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 CALM1P0DP23 149 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 CALM2P0DP24 149 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 CALM3P0DP25 149 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 LMOD1P29536 600 aaPredicted RBP7.78□□□□□ -1.16
PTPRT-209ENST00000612229 ZNF131P52739 623 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 WTAPQ15007 396 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 DBN1Q16643 649 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 ALG1Q9BT22 464 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 MAD1L1Q9Y6D9 718 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 CACTINQ8WUQ7 758 aaKnown RBP7.78□□□□□ -1.16
PTPRT-209ENST00000612229 HLA-DOAP06340 250 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 PSMA4P25789 261 aaKnown RBP7.78□□□□□ -1.16
PTPRT-209ENST00000612229 ARHGAP4P98171 946 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 PAXIP1Q6ZW49 1069 aaPredicted RBP7.78□□□□□ -1.16
PTPRT-209ENST00000612229 P3H4Q92791 437 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 PRXQ9BXM0 1461 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 BAG3O95817 575 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 BRD3Q15059 726 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 PPP4R1Q8TF05 950 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 PHACTR2O75167 634 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 ATP6V1AP38606 617 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 TTC41PQ6P2S7 1318 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 ATP6V0A1Q93050 837 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 CCDC138Q96M89 665 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 SPINK5Q9NQ38 1064 aaPredicted RBP7.78□□□□□ -1.16
PTPRT-209ENST00000612229 AFMP43652 599 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 PLCB4Q15147 1175 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 C8orf34Q49A92 452 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 C8orf74Q6P047 294 aa7.78□□□□□ -1.16
PTPRT-209ENST00000612229 SPATS2LQ9NUQ6 558 aaKnown RBP7.78□□□□□ -1.16
PTPRT-209ENST00000612229 TMCO5AQ8N6Q1 288 aa7.77□□□□□ -1.16
PTPRT-209ENST00000612229 HAUS7Q99871 368 aa7.77□□□□□ -1.16
PTPRT-209ENST00000612229 MED4Q9NPJ6 270 aa7.77□□□□□ -1.16
PTPRT-209ENST00000612229 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.77□□□□□ -1.16
PTPRT-209ENST00000612229 SNAPC4Q5SXM2 1469 aa7.77□□□□□ -1.16
PTPRT-209ENST00000612229 PPP2R5DQ14738 602 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 SYCE1Q8N0S2 351 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 HPDP32754 393 aaPredicted RBP7.77□□□□□ -1.17
PTPRT-209ENST00000612229 GFM2Q969S9 779 aaKnown RBP7.77□□□□□ -1.17
PTPRT-209ENST00000612229 NAP1L4Q99733 375 aaKnown RBP7.77□□□□□ -1.17
PTPRT-209ENST00000612229 NUP58Q9BVL2 599 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 MRC2Q9UBG0 1479 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 HSPA1LP34931 641 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 PHBP35232 272 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 MAIP1Q8WWC4 291 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 BAG5Q9UL15 447 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 ASIC1P78348 528 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 COG7P83436 770 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 CDR2Q01850 454 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 MYL5Q02045 173 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 FLIIQ13045 1269 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 HAUS1Q96CS2 278 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 RLBP1P12271 317 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 RPL13P26373 211 aaKnown RBP7.77□□□□□ -1.17
PTPRT-209ENST00000612229 ANKFY1Q9P2R3 1169 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 TEKT2Q9UIF3 430 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 FAM160A1Q05DH4 1040 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 GOLGA5Q8TBA6 731 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 TRIM75PA6NK02 468 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 E7EVH7 732 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 RRS1Q15050 365 aaKnown RBP7.77□□□□□ -1.17
PTPRT-209ENST00000612229 ZSCAN26Q16670 478 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 MUM1Q2TAK8 710 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 MCMDC2Q4G0Z9 681 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 NOX5Q96PH1 765 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 KRT2P35908 639 aa7.77□□□□□ -1.17
PTPRT-209ENST00000612229 PAK2Q13177 524 aa7.76□□□□□ -1.17
PTPRT-209ENST00000612229 CYB5RLQ6IPT4 315 aa7.76□□□□□ -1.17
PTPRT-209ENST00000612229 CCDC25Q86WR0 208 aa7.76□□□□□ -1.17
PTPRT-209ENST00000612229 CERS3Q8IU89 383 aa7.76□□□□□ -1.17
PTPRT-209ENST00000612229 NSMCE1Q8WV22 266 aa7.76□□□□□ -1.17
PTPRT-209ENST00000612229 ESR2Q92731 530 aa7.76□□□□□ -1.17
PTPRT-209ENST00000612229 PSMD1Q99460 953 aa7.76□□□□□ -1.17
PTPRT-209ENST00000612229 ANKRD36BQ8N2N9 1353 aa7.76□□□□□ -1.17
PTPRT-209ENST00000612229 IFIT1BQ5T764 474 aaKnown RBP7.76□□□□□ -1.17
PTPRT-209ENST00000612229 PPFIA4O75335 1185 aa7.76□□□□□ -1.17
PTPRT-209ENST00000612229 IGHDP01880 384 aa7.76□□□□□ -1.17
PTPRT-209ENST00000612229 CDAN1Q8IWY9 1227 aa7.76□□□□□ -1.17
PTPRT-209ENST00000612229 LLPHQ9BRT6 129 aaKnown RBP7.76□□□□□ -1.17
PTPRT-209ENST00000612229 SAMM50Q9Y512 469 aa7.76□□□□□ -1.17
PTPRT-209ENST00000612229 ERCC3P19447 782 aa7.76□□□□□ -1.17
PTPRT-209ENST00000612229 RNASELQ05823 741 aaKnown RBP7.76□□□□□ -1.17
PTPRT-209ENST00000612229 KARSQ15046 597 aaKnown RBP7.76□□□□□ -1.17
PTPRT-209ENST00000612229 Q6ZUG5 572 aa7.76□□□□□ -1.17
PTPRT-209ENST00000612229 TOM1L2Q6ZVM7 507 aa7.76□□□□□ -1.17
PTPRT-209ENST00000612229 DENND2CQ68D51 928 aa7.76□□□□□ -1.17
PTPRT-209ENST00000612229 MCM10Q7L590 875 aa7.76□□□□□ -1.17
PTPRT-209ENST00000612229 ANKIB1Q9P2G1 1089 aa7.76□□□□□ -1.17
PTPRT-209ENST00000612229 EEF2P13639 858 aaKnown RBP7.76□□□□□ -1.17
PTPRT-209ENST00000612229 OAS2P29728 719 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms