RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 MECOMQ03112 1051 aa10.69□□□□□ -0.7
SMAD4-217ENST00000611848 TNFAIP1Q13829 316 aa10.69□□□□□ -0.7
SMAD4-217ENST00000611848 DIXDC1Q155Q3 683 aa10.69□□□□□ -0.7
SMAD4-217ENST00000611848 TMED8Q6PL24 325 aaPredicted RBP10.69□□□□□ -0.7
SMAD4-217ENST00000611848 NSUN4Q96CB9 384 aaKnown RBP10.69□□□□□ -0.7
SMAD4-217ENST00000611848 UPF2Q9HAU5 1272 aaKnown RBP10.69□□□□□ -0.7
SMAD4-217ENST00000611848 ZNF70Q9UC06 446 aaPredicted RBP10.69□□□□□ -0.7
SMAD4-217ENST00000611848 DAGLAQ9Y4D2 1042 aa10.69□□□□□ -0.7
SMAD4-217ENST00000611848 GAKO14976 1311 aa10.68□□□□□ -0.7
SMAD4-217ENST00000611848 TTC41PQ6P2S7 1318 aa10.68□□□□□ -0.7
SMAD4-217ENST00000611848 CLRN2A0PK11 232 aa10.68□□□□□ -0.7
SMAD4-217ENST00000611848 TMEM88BA6NKF7 163 aa10.68□□□□□ -0.7
SMAD4-217ENST00000611848 ADM5C9JUS6 153 aa10.68□□□□□ -0.7
SMAD4-217ENST00000611848 TRAF5O00463 557 aa10.68□□□□□ -0.7
SMAD4-217ENST00000611848 HAUS7Q99871 368 aa10.68□□□□□ -0.7
SMAD4-217ENST00000611848 LNPKQ9C0E8 428 aa10.68□□□□□ -0.7
SMAD4-217ENST00000611848 BOLA2Q9H3K6 86 aa10.68□□□□□ -0.7
SMAD4-217ENST00000611848 TDRD3Q9H7E2 651 aaKnown RBP10.68□□□□□ -0.7
SMAD4-217ENST00000611848 VEZTQ9HBM0 779 aa10.68□□□□□ -0.7
SMAD4-217ENST00000611848 TMOD2Q9NZR1 351 aa10.68□□□□□ -0.7
SMAD4-217ENST00000611848 PPP2R3BQ9Y5P8 575 aa10.68□□□□□ -0.7
SMAD4-217ENST00000611848 MROH7-TTC4A0A0A0MT08 1334 aa10.68□□□□□ -0.7
SMAD4-217ENST00000611848 DOCK2Q92608 1830 aa10.67□□□□□ -0.7
SMAD4-217ENST00000611848 ERC2O15083 957 aa10.67□□□□□ -0.7
SMAD4-217ENST00000611848 TNNI2P48788 182 aa10.67□□□□□ -0.7
SMAD4-217ENST00000611848 MAP3K12Q12852 859 aa10.67□□□□□ -0.7
SMAD4-217ENST00000611848 BMP2KLQ5H9B9 411 aa10.67□□□□□ -0.7
SMAD4-217ENST00000611848 FKBP1CQ5VVH2 108 aa10.67□□□□□ -0.7
SMAD4-217ENST00000611848 NAA16Q6N069 864 aaPredicted RBP10.67□□□□□ -0.7
SMAD4-217ENST00000611848 DNAJC2Q99543 621 aaKnown RBP10.67□□□□□ -0.7
SMAD4-217ENST00000611848 DEFB129Q9H1M3 183 aa10.67□□□□□ -0.7
SMAD4-217ENST00000611848 PIH1D3Q9NQM4 214 aaKnown RBP10.67□□□□□ -0.7
SMAD4-217ENST00000611848 CREBZFQ9NS37 354 aa10.67□□□□□ -0.7
SMAD4-217ENST00000611848 MAST2Q6P0Q8 1798 aa10.67□□□□□ -0.7
SMAD4-217ENST00000611848 AOX1Q06278 1338 aa10.67□□□□□ -0.7
SMAD4-217ENST00000611848 GPR75-ASB3A0A0A6YYF3 556 aa10.66□□□□□ -0.7
SMAD4-217ENST00000611848 GOLIM4O00461 696 aa10.66□□□□□ -0.7
SMAD4-217ENST00000611848 IDH1O75874 414 aaKnown RBP10.66□□□□□ -0.7
SMAD4-217ENST00000611848 CELF2O95319 508 aaKnown RBP10.66□□□□□ -0.7
SMAD4-217ENST00000611848 MAP4K4O95819 1239 aaPredicted RBP10.66□□□□□ -0.7
SMAD4-217ENST00000611848 MX1P20591 662 aa10.66□□□□□ -0.7
SMAD4-217ENST00000611848 FMR1Q06787 632 aaKnown RBP eCLIP10.66□□□□□ -0.7
SMAD4-217ENST00000611848 ZNF384Q8TF68 577 aa10.66□□□□□ -0.7
SMAD4-217ENST00000611848 CDCA5Q96FF9 252 aa10.66□□□□□ -0.7
SMAD4-217ENST00000611848 ANTXR1Q9H6X2 564 aa10.66□□□□□ -0.7
SMAD4-217ENST00000611848 PAG1Q9NWQ8 432 aa10.66□□□□□ -0.7
SMAD4-217ENST00000611848 DAXXQ9UER7 740 aaPredicted RBP10.66□□□□□ -0.7
SMAD4-217ENST00000611848 NDUFB9Q9Y6M9 179 aa10.66□□□□□ -0.7
SMAD4-217ENST00000611848 GLRX3O76003 335 aaKnown RBP10.66□□□□□ -0.7
SMAD4-217ENST00000611848 BAG3O95817 575 aa10.66□□□□□ -0.7
SMAD4-217ENST00000611848 NF2P35240 595 aa10.66□□□□□ -0.7
SMAD4-217ENST00000611848 BTDP43251 543 aa10.66□□□□□ -0.7
SMAD4-217ENST00000611848 SLC4A3P48751 1232 aa10.66□□□□□ -0.7
SMAD4-217ENST00000611848 CST9Q5W186 159 aa10.66□□□□□ -0.7
SMAD4-217ENST00000611848 CDC42EP5Q6NZY7 148 aa10.66□□□□□ -0.7
SMAD4-217ENST00000611848 FAM83AQ86UY5 434 aa10.66□□□□□ -0.7
SMAD4-217ENST00000611848 NOL10Q9BSC4 688 aaKnown RBP10.66□□□□□ -0.7
SMAD4-217ENST00000611848 USP40Q9NVE5 1235 aa10.66□□□□□ -0.7
SMAD4-217ENST00000611848 SCAF8Q9UPN6 1271 aaKnown RBP10.66□□□□□ -0.7
SMAD4-217ENST00000611848 MYH7P12883 1935 aa10.65□□□□□ -0.7
SMAD4-217ENST00000611848 AK9Q5TCS8 1911 aa10.65□□□□□ -0.7
SMAD4-217ENST00000611848 SALL3Q9BXA9 1300 aa10.65□□□□□ -0.7
SMAD4-217ENST00000611848 TCP10L2B9ZVM9 353 aa10.65□□□□□ -0.7
SMAD4-217ENST00000611848 PPP4CP60510 307 aa10.65□□□□□ -0.7
SMAD4-217ENST00000611848 RASA3Q14644 834 aa10.65□□□□□ -0.7
SMAD4-217ENST00000611848 SUPT20HL1Q3ZLR7 823 aa10.65□□□□□ -0.7
SMAD4-217ENST00000611848 DLK2Q6UY11 383 aa10.65□□□□□ -0.7
SMAD4-217ENST00000611848 MAGEB6Q8N7X4 407 aa10.65□□□□□ -0.7
SMAD4-217ENST00000611848 C2orf69Q8N8R5 385 aa10.65□□□□□ -0.7
SMAD4-217ENST00000611848 OTUD7AQ8TE49 926 aaPredicted RBP10.65□□□□□ -0.7
SMAD4-217ENST00000611848 ZNF408Q9H9D4 720 aa10.65□□□□□ -0.7
SMAD4-217ENST00000611848 STAP2Q9UGK3 403 aa10.65□□□□□ -0.7
SMAD4-217ENST00000611848 PLCG2P16885 1265 aa10.64□□□□□ -0.71
SMAD4-217ENST00000611848 CYP7A1P22680 504 aa10.64□□□□□ -0.71
SMAD4-217ENST00000611848 PDE1AP54750 535 aa10.64□□□□□ -0.71
SMAD4-217ENST00000611848 FKBP1BP68106 108 aa10.64□□□□□ -0.71
SMAD4-217ENST00000611848 NBR1Q14596 966 aa10.64□□□□□ -0.71
SMAD4-217ENST00000611848 TSHZ3Q63HK5 1081 aa10.64□□□□□ -0.71
SMAD4-217ENST00000611848 CERS3Q8IU89 383 aa10.64□□□□□ -0.71
SMAD4-217ENST00000611848 PI4K2BQ8TCG2 481 aa10.64□□□□□ -0.71
SMAD4-217ENST00000611848 EDC3Q96F86 508 aaKnown RBP10.64□□□□□ -0.71
SMAD4-217ENST00000611848 IDI2Q9BXS1 227 aa10.64□□□□□ -0.71
SMAD4-217ENST00000611848 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.64□□□□□ -0.71
SMAD4-217ENST00000611848 GBA2Q9HCG7 927 aaPredicted RBP10.64□□□□□ -0.71
SMAD4-217ENST00000611848 CACNB3P54284 484 aa10.63□□□□□ -0.71
SMAD4-217ENST00000611848 RHBDL3P58872 404 aa10.63□□□□□ -0.71
SMAD4-217ENST00000611848 BECN1Q14457 450 aa10.63□□□□□ -0.71
SMAD4-217ENST00000611848 SLC9C2Q5TAH2 1124 aa10.63□□□□□ -0.71
SMAD4-217ENST00000611848 PRAMEF18Q5VWM3 479 aa10.63□□□□□ -0.71
SMAD4-217ENST00000611848 FAM151AQ8WW52 585 aa10.63□□□□□ -0.71
SMAD4-217ENST00000611848 AATFQ9NY61 560 aaKnown RBP eCLIP10.63□□□□□ -0.71
SMAD4-217ENST00000611848 ABT1Q9ULW3 272 aaKnown RBP10.63□□□□□ -0.71
SMAD4-217ENST00000611848 TLL2Q9Y6L7 1015 aa10.63□□□□□ -0.71
SMAD4-217ENST00000611848 RPAP1Q9BWH6 1393 aaPredicted RBP10.63□□□□□ -0.71
SMAD4-217ENST00000611848 PAPPA2Q9BXP8 1791 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 PPP1R12BO60237 982 aaPredicted RBP10.62□□□□□ -0.71
SMAD4-217ENST00000611848 ENTPD3O75355 529 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 PDE6AP16499 860 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 NFIAQ12857 509 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 LRRFIP1Q32MZ4 808 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms